FC868969

Overview
NameFC868969
Unique NameFC868969
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC868969_ssr52 microsatellite FC868969_ssr52:52..66. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.248e-17
Identity = 53/136 (38.97%), Postives = 80/136 (58.82%), Query Frame = 2
Query:  356 APNEAHLSSDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLF 763
            A   A  + D P+    D+ +    LQF F+ +++AT  F   + LG+GGFG V+KG      T P    +G+ VAVK L     QG +E+  EV  + +L H NLVKL+G+C+E ++++LVYEF++  SL+  LF
Sbjct:  304 ASKRAKKTYDTPEE---DDITTAGSLQFDFKVIEAATDKFSMCNKLGQGGFGQVYKG------TLP----NGVQVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLF 426          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.248e-17
Identity = 50/130 (38.46%), Postives = 74/130 (56.92%), Query Frame = 2
Query:  374 LSSDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLF 763
            LS++  D    D  +  + LQF F  +++AT  F   + LG GGFG V+KG +           +G TVA+K L     QG  E+  EVD + +L H NL KL+GYC++ ++++LVYEF+   SL+  LF
Sbjct:  315 LSAETED-LDEDGITSTETLQFQFSAIEAATNKFSESNKLGHGGFGEVYKGQLI----------TGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLF 433          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.248e-17
Identity = 50/112 (44.64%), Postives = 68/112 (60.71%), Query Frame = 2
Query:  425 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 760
            QL +  F +L  AT  F   S++G GGFG VFK  +++          G +VA+K L     QG RE++AE++ LG++ H NLV L+GYC   ++RLLVYEFM  GSLE  L
Sbjct:  822 QLRKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKD----------GSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVL 923          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.242e-17
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 2
Query:  407 DEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLF 763
            D+ +  Q LQF F  ++ AT NF  ++ LG+GGFG V+KG +               +AVK L  +  QG +E+  EV  + +L H NLV+L+G+CIE D+++LVYEF++  SL+  LF
Sbjct:  317 DDMTSPQSLQFDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNE----------TEIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLF 425          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.242e-17
Identity = 47/107 (43.93%), Postives = 64/107 (59.81%), Query Frame = 2
Query:  443 FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLF 763
            F+ LK+AT NF P++ LG GGFG V+KG              G  +AVK L     QG  E+  E+  L +L H NLV+L+G+CIE  +R+LVYEF+   SL+N +F
Sbjct:  351 FETLKAATDNFSPENELGRGGFGSVYKGVFS----------GGQEIAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIF 447          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.242e-17
Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 2
Query:  437 FTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKS--LKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRK 769
            FT++EL+ A   F+ +SI+G+G F  V+KG + +          G TVAVK   +  D  +   E+  E+D L +L+H +L+ L+GYC E  +RLLVYEFM  GSL NHL  K
Sbjct:  500 FTYEELEKAADGFKEESIVGKGSFSCVYKGVLRD----------GTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGK 602          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.541e-17
Identity = 58/184 (31.52%), Postives = 87/184 (47.28%), Query Frame = 2
Query:  239 GSCKSSASNHSANTIPRTSLVYDAATETRYL-------NASNRELCAPNEAHLSSDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRK 769
            G C SS+ N     I   +           L         S+     P+ A+LS +N            +  + T+ E+   T NF  + ++GEGGFG V+ G++ ++            VAVK L P   QG++E+ AEV+ L ++HH NLV L+GYC E     L+YE+M  G L++HL  K
Sbjct:  502 GPCNSSSGNKETTVIAPVAAAIAIFIAVLVLIIVFIKKRPSSIRALHPSRANLSLEN------------KKRRITYSEILLMTNNF--ERVIGEGGFGVVYHGYLNDSEQ----------VAVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGK 661          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.541e-17
Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = 2
Query:  437 FTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRKTI 775
            F+  EL+ AT NF    I+G GGFG V+ G +++          G  VAVK   P   QG  E+  E+  L +L H +LV LIGYC E+ + +LVYEFM+ G   +HL+ K +
Sbjct:  514 FSLSELQEATKNFEASQIIGVGGFGNVYIGTLDD----------GTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKNL 616          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.541e-17
Identity = 44/115 (38.26%), Postives = 67/115 (58.26%), Query Frame = 2
Query:  434 QFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRKTIP 778
            +FT  E+++AT NF     +G GGFG V++G +E+          G  +A+K   P   QG  E+  E+  L +L H +LV LIG+C E ++ +LVYE+M  G+L +HLF   +P
Sbjct:  507 KFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELED----------GTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNLP 611          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.541e-17
Identity = 45/114 (39.47%), Postives = 67/114 (58.77%), Query Frame = 2
Query:  437 FTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRKTIP 778
            F+F E+K+AT NF    +LG GGFG V++G I+         G    VA+K   P   QG  E+  E++ L +L H +LV LIGYC E+ + +LVY++M  G++  HL++   P
Sbjct:  524 FSFAEIKAATKNFDESRVLGVGGFGKVYRGEID---------GGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNP 628          
The following BLAST results are available for this feature:
BLAST of FC868969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
CRK5_ARATH3.248e-1738.97Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK25_ARATH3.248e-1738.46Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
BRL2_ARATH3.248e-1744.64Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
CRK31_ARATH4.242e-1740.34Putative cysteine-rich receptor-like protein kinas... [more]
CRK28_ARATH4.242e-1743.93Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
ACR4_ARATH4.242e-1742.48Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y5169_ARATH5.541e-1731.52Probable LRR receptor-like serine/threonine-protei... [more]
Y4391_ARATH5.541e-1740.71Probable receptor-like protein kinase At4g39110 OS... [more]
Y1357_ARATH5.541e-1738.26Probable receptor-like protein kinase At1g30570 OS... [more]
FERON_ARATH5.541e-1739.47Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC31007B04EF AbioticL1 Citrus clementina cDNA clone C31007B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868969 ID=FC868969; Name=FC868969; organism=Citrus clementina; type=EST; length=783bp
GACTTCACTTCTCTTTTCTCTTTCTTCTTCTATTAAACCAATGGCCAGTC
CCCTCCTCCTCCTCCTCTTGTTTACACTTTGTTTTATCATGCAATTATAT
ATGTAAATTACTACTACTCACTGCAACATGTAACGAAACATAGAAATTAC
AATTAACAAACGAATAAAAAAAATATTAATCTTTCATTTCATGGAAACCA
AGTGCGGTTGCTGGGCTTTTCTTAAACGCGGCGTTAGAGGTTCCTGCAAG
TCCTCTGCTTCTAATCACTCTGCTAACACTATTCCTCGTACTAGTCTTGT
TTATGATGCAGCTACTGAGACGCGATACTTGAATGCTAGTAATCGGGAGC
TATGTGCTCCAAATGAAGCTCACTTGTCCTCGGATAATCCTGATCCAGCT
CCTACAGATGAAAAATCACCATGCCAGCTGCTTCAGTTCACTTTTCAGGA
GCTAAAATCAGCAACTGGAAATTTTAGGCCTGATAGTATTCTTGGGGAGG
GTGGATTTGGATATGTCTTCAAAGGATGGATTGAAGAAAATGGGACAGCT
CCGGCAAAACCCGGGTCGGGAATTACAGTTGCTGTTAAGAGCTTGAAGCC
AGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAGGTTGACTTTCTTG
GGCAGCTTCACCATCCTAATCTTGTTAAGCTTATTGGCTACTGCATTGAA
GATGATCAGCGTCTGCTTGTTTATGAATTCATGACTCGTGGTAGTCTTGA
AAATCATCTTTTTCGAAAGACTATACCTCTTCC
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