FC868971

Overview
NameFC868971
Unique NameFC868971
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9432 contig Ccv1_Contig9432:1..714. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868971 vs. ExPASy Swiss-Prot
Match: P20D1_XENTR (Probable carboxypeptidase PM20D1 OS=Xenopus tropicalis GN=pm20d1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 3
Query:  357 GSDPSLPSILLNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYLEAIRNLILVKNFKPIRTVHVSCVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQA 698
            GSD +L   +L +H+D VPA P+ W  PPFS       G I+ RG+ DDK   I  L+++   +L +  KP R+ ++    DEEI G  G  K VE  + + + + FV+DEG A
Sbjct:  121 GSDHNLLPYMLLAHIDVVPAPPESWEVPPFSG--EERDGYIYGRGTLDDKNCVIGILQSLE-FLLKRGHKPRRSFYIGLGHDEEISGHKGAQKIVEKLQSQGVKLAFVLDEGLA 231          
BLAST of FC868971 vs. ExPASy Swiss-Prot
Match: P20D1_BOVIN (Probable carboxypeptidase PM20D1 OS=Bos taurus GN=PM20D1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.884e-14
Identity = 44/117 (37.61%), Postives = 66/117 (56.41%), Query Frame = 3
Query:  342 LLTWPGSDPSLPSILLNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYLEAIRNLILVKNFKPIRTVHVSCVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEG 692
            L T  GSDPS+   +L +H+D VPA    W  PPFS       G I+ RG+ D+K   +  L+A+  L+L++N+ P R+  ++   DEEI G +G  K     + R + + FV+DEG
Sbjct:  107 LFTIKGSDPSMQPYILLAHIDVVPAPDKGWDVPPFSGLE--RDGFIYGRGTLDNKNYLMAILQAL-ELLLIRNYIPRRSFFIALGHDEEISGINGAQKISALLQARGVQLAFVVDEG 220          
BLAST of FC868971 vs. ExPASy Swiss-Prot
Match: P20D1_MOUSE (Probable carboxypeptidase PM20D1 OS=Mus musculus GN=Pm20d1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 43/117 (36.75%), Postives = 65/117 (55.56%), Query Frame = 3
Query:  342 LLTWPGSDPSLPSILLNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYLEAIRNLILVKNFKPIRTVHVSCVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEG 692
            L T  GSDPSL   +L +H+D VPA  + W  PPFS       G I+ RG+ D+K   +  L A+  L+L++N+ P R+  ++   DEE+ G  G  K     + R + + F++DEG
Sbjct:  107 LFTIQGSDPSLQPYMLMAHIDVVPAPEEGWEVPPFSGLE--RNGFIYGRGALDNKNSVMAILHAL-ELLLIRNYSPKRSFFIALGHDEEVSGEKGAQKISALLQARGVQLAFLVDEG 220          
BLAST of FC868971 vs. ExPASy Swiss-Prot
Match: CBPS1_DICDI (Probable carboxypeptidase S-like 1 OS=Dictyostelium discoideum GN=DDB_G0270582 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 45/126 (35.71%), Postives = 67/126 (53.17%), Query Frame = 3
Query:  321 VPNKPVLLLTWPGSDPSLPSILLNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYLEAIRNLILVKNFKPIRTVHVSCVPDEEIGGFDGMAKFVESNEFRE--LNVGFVMDEG 692
            V NK  LL  W GSD +L  +LLNSH D VP    +W+  P+    +     I+ RGS D+K I +  +E+I  ++     +PIRT+++    DEE+GG +G      +  FRE  +    + DEG
Sbjct:   86 VINKYSLLFEWTGSDKTLKPLLLNSHYDVVPVTESEWTFNPWGEIRN---DNIYGRGSIDNKVIVMATMESIEAILANNYTQPIRTIYLCFGHDEELGGLNGHRMI--ARHFRENLVRAEAIFDEG 206          
BLAST of FC868971 vs. ExPASy Swiss-Prot
Match: P20D1_HUMAN (Probable carboxypeptidase PM20D1 OS=Homo sapiens GN=PM20D1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.680e-12
Identity = 44/117 (37.61%), Postives = 63/117 (53.85%), Query Frame = 3
Query:  342 LLTWPGSDPSLPSILLNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYLEAIRNLILVKNFKPIRTVHVSCVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEG 692
            L T  GSDPSL   LL +H D VPA  + W  PPFS       G I+ RG+ DDK   +  L+A+  L+L++ + P R+  +S   DEE  G  G  +     + R + + F++DEG
Sbjct:  107 LFTIQGSDPSLQPYLLMAHFDVVPAPEEGWEVPPFSGLE--RDGVIYGRGTLDDKNSVMALLQAL-ELLLIRKYIPRRSFFISLGHDEESSG-TGAQRISALLQSRGVQLAFIVDEG 219          
BLAST of FC868971 vs. ExPASy Swiss-Prot
Match: CBPS2_YEAST (Putative carboxypeptidase YOL153C OS=Saccharomyces cerevisiae GN=YOL153C PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.500e-12
Identity = 43/103 (41.75%), Postives = 55/103 (53.40%), Query Frame = 3
Query:  327 NKPVLLLTWPGSDPSLPSILLNSHLDSVPAEP---DKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYLEAIRNLILVKNFKPIRTVHVSCVPDEEIGGFDG 626
            N+  LL TW G+DPSL  IL  +H D VP      D W +PP S  +  ET  ++ RGS D K + +  LE I  L L   ++  RTV +S   DEE  GF G
Sbjct:  147 NQLGLLYTWEGTDPSLKPILFMAHQDVVPVNREIWDSWQYPPLSGHYDQETDYVWGRGSNDCKNLMLAELEGIEQL-LADGYQTERTVILSLGFDEESSGFMG 248          
BLAST of FC868971 vs. ExPASy Swiss-Prot
Match: YE48_SCHPO (Uncharacterized carboxypeptidase C24C9.08 OS=Schizosaccharomyces pombe GN=SPAC24C9.08 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11
Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 3
Query:  339 LLLTWPGSDPSLPSILLNSHLDSVP---AEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYLEAIRNLILVKNFKPIRTVHVSCVPDEEIGGFDGMAKFVES--NEFRELNVGFVMDEGQASTN 707
            LL+T  GS+  L  ++L  H D VP   A  D+W  PPFSA +    G +++RG+ DDK   +  LEA+  ++ + ++KP +TV  S   DEE+ G+ G           + +  V  ++DEG  + N
Sbjct:  178 LLITLEGSNKDLKPLVLMGHQDVVPVNQASLDRWYFPPFSATY--HNGHVYSRGAADDKNSVVAILEAL-EILAISDYKPEQTVIASFGFDEEVSGYRGALPLAHKLYERYGKDGVALILDEGGFTIN 302          
BLAST of FC868971 vs. ExPASy Swiss-Prot
Match: P20D1_DANRE (Probable carboxypeptidase PM20D1 OS=Danio rerio GN=pm20d1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11
Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = 3
Query:  342 LLTWPGSDPSLPSILLNSHLDSVPA-EPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYLEAIRNLILVKNFKPIRTVHVSCVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQA 698
            L T  G+D  L   +L +H+D VPA E D W  PPFSA      G I+ RG+ D+K   +  L+A+  L L K + P RT ++    DEE+ G  G    V+  + R + + +V+DEG A
Sbjct:  124 LFTIAGTDADLEPYMLLAHIDVVPANEADGWDAPPFSA--QEINGFIYGRGTIDNKQSVMGILQALEYL-LEKGYTPRRTFYIGLGHDEEVNGLHGAVNIVKLLKSRGVKLLYVLDEGLA 240          
The following BLAST results are available for this feature:
BLAST of FC868971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
P20D1_XENTR2.192e-1438.60Probable carboxypeptidase PM20D1 OS=Xenopus tropic... [more]
P20D1_BOVIN4.884e-1437.61Probable carboxypeptidase PM20D1 OS=Bos taurus GN=... [more]
P20D1_MOUSE6.379e-1436.75Probable carboxypeptidase PM20D1 OS=Mus musculus G... [more]
CBPS1_DICDI3.166e-1335.71Probable carboxypeptidase S-like 1 OS=Dictyosteliu... [more]
P20D1_HUMAN2.680e-1237.61Probable carboxypeptidase PM20D1 OS=Homo sapiens G... [more]
CBPS2_YEAST3.500e-1241.75Putative carboxypeptidase YOL153C OS=Saccharomyces... [more]
YE48_SCHPO1.018e-1133.59Uncharacterized carboxypeptidase C24C9.08 OS=Schiz... [more]
P20D1_DANRE1.018e-1137.50Probable carboxypeptidase PM20D1 OS=Danio rerio GN... [more]

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Properties
Property NameValue
Genbank descriptionC31007B06EF AbioticL1 Citrus clementina cDNA clone C31007B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868971 ID=FC868971; Name=FC868971; organism=Citrus clementina; type=EST; length=714bp
GGAAATGACAAACATTAATGCTCTGTGTTTACAGTTTCCCACTCGTCGAG
TTCTTTGCTACAGTATCACAGTCCACTCTATTACAGTCTACAGTCACTTC
CATGGCCGCCGGTCGCCATATGCTTCTGATGCTCGCAGCCGCGATCCTCT
TCTCCTTCACTTCATCTGGAAAATCACACGAAGAACGAGAGCCCATAACT
CGCTTCAAACAATACCTCCGATTCAATACCGCCCACCCGAATCCCAACTA
CACAGCTCCGGTGTCCTTCCTCGTATCCCAAGCTCAATCCATTGGCCTTC
AATTCAAGACCCTAGAATTTGTCCCGAATAAACCCGTCTTACTCCTAACT
TGGCCCGGCTCAGACCCTTCTCTCCCTTCTATCCTCTTGAACTCCCACCT
CGACTCCGTCCCCGCCGAGCCAGACAAATGGTCCCACCCTCCCTTCTCCG
CCTTCCACTCCCCTGAAACCGGCCAAATATTTGCCCGTGGGTCCCAGGAC
GACAAGTGCATCGCCATCCAGTACCTCGAAGCCATCCGCAACTTGATACT
GGTCAAAAACTTCAAGCCAATCCGTACCGTCCACGTGTCCTGCGTGCCCG
ACGAGGAAATCGGAGGGTTTGACGGGATGGCGAAGTTCGTTGAGTCTAAC
GAGTTTCGGGAACTGAATGTTGGGTTTGTTATGGACGAAGGACAGGCTTC
GACGAACGATGATT
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