FC868986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_SALSA (Ribosome biogenesis protein wdr12 OS=Salmo salar GN=wdr12 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.245e-24 Identity = 66/176 (37.50%), Postives = 97/176 (55.11%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVDAE 675 ++Q RF T K V +IP+ LS+V+N LL+A N FDFLV G+ +R SL + A+GIS E V+EIEY++ + EE +HDDW+S+V+ + +ILTG YD ++W G + GH V V +K DGL + + T DQT+ LW+ ++E Sbjct: 3 QLQTRFFTDNKK-YSVDDVPFSIPAASEVQELSNVINKLLEAKNGSRSQIEFDFLVQGQFLRTSLSNHMEAEGISTEDVVEIEYVERFTAPQPEECMMHDDWISSVEADSE-WILTGSYDKTAKIWSLEGKAVMTVAGHTDVVKDVAWVKRDGLTSL-LLTASLDQTILLWEWNSE 175
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: YTM1_PICGU (Ribosome biogenesis protein YTM1 OS=Pichia guilliermondii GN=YTM1 PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.242e-24 Identity = 67/186 (36.02%), Postives = 99/186 (53.23%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGF--------------ILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWK 663 +V+VRF T + KV N I +P +L R+GLS +VN+LL + K+ PFDFLV+G L+R SL+ +L +G+S E V++++Y +AV P ++DW+S++D NPG IL+G YD + R + G GH G V SV I + + D +LRLWK Sbjct: 18 QVKVRFFTNEEDDLKVSENPIFVPVSLKRYGLSEIVNHLLNDGETK-KAIPFDFLVDGVLLRTSLQDYLTKQGLSTETVIDLQYTRAVLPPSFLASFTNEDWISSIDTINPGHGAVLASNMKLQESKILSGSYDGVVRTYNMSGEVESQYIGHSGPVKSVRWISP-----TRIVSAGNDHSLRLWK 197
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: YTM1_COCIM (Ribosome biogenesis protein YTM1 OS=Coccidioides immitis GN=YTM1 PE=3 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 9.458e-24 Identity = 70/198 (35.35%), Postives = 106/198 (53.54%), Query Frame = 1 Query: 121 EDQNEENSRRVQVRFKTK---LKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAV----DGSNPGFILTGCYDNLGRVWKAGGVCTHILE-----GHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVDAEE 678 E Q++ + ++RF T+ L P+ + I +P+ L R+ LS++VNNLL P P +FL+NG +R S+++FL A GISAE L++EY++A+ P LHDDWVS+V D N I++ YD L RVW H GH A+ V + + + V++G D+T+RLWK +E Sbjct: 8 EVQSQTAQTQARLRFSTRDEDLALPES--TGPILVPTGLRRYALSTLVNNLLATEKPV----PLEFLINGTYLRTSVDEFLTANGISAETTLDVEYVRALIPPLHVASFLHDDWVSSVDVLSDSQNEERIISASYDGLLRVWNMSSEIIHTSASAKDGGHQSAIKCVRFLSASQI----VSSGI-DRTVRLWKYTDQE 194
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_BOVIN (Ribosome biogenesis protein WDR12 OS=Bos taurus GN=WDR12 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.007e-23 Identity = 61/176 (34.66%), Postives = 97/176 (55.11%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVDAE 675 ++Q RF T K V +IP+ LS+++N LL+A N K FDFL+ G+ +RM L + + + IS+E+V+E+EY++ + E+ HDDW+SA++G+ +ILTG YD R+W G + GH V V +K D L + ++ DQT+ LW+ + E Sbjct: 3 QLQTRFFTDNKK-YAVDDVPFSIPAASEIADLSNLINKLLEAKNEFHKHVEFDFLIKGQFLRMPLFKHMELENISSEEVVELEYVEKYTAPQPEQCMFHDDWISAIEGTEE-WILTGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASM-DQTILLWEWNVE 175
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_HUMAN (Ribosome biogenesis protein WDR12 OS=Homo sapiens GN=WDR12 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.784e-22 Identity = 60/176 (34.09%), Postives = 96/176 (54.55%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVDAE 675 ++Q RF T K V +IP+ LS+++N LL+ N K FDFL+ G+ +RM L++ + + IS+E+V+EIEY++ + E+ HDDW+S++ G+ +ILTG YD R+W G + GH V V +K D L + ++ DQT+ LW+ + E Sbjct: 3 QLQTRFYTDNKK-YAVDDVPFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQFLRMPLDKHMEMENISSEEVVEIEYVEKYTAPQPEQCMFHDDWISSIKGAEE-WILTGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASM-DQTILLWEWNVE 175
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_PONAB (Ribosome biogenesis protein WDR12 OS=Pongo abelii GN=WDR12 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.330e-22 Identity = 59/176 (33.52%), Postives = 96/176 (54.55%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVDAE 675 ++Q RF T K + +IP+ LS+++N LL+ N K FDFL+ G+ +RM L++ + + IS+E+V+EIEY++ + E+ HDDW+S++ G+ +ILTG YD R+W G + GH V V +K D L + ++ DQT+ LW+ + E Sbjct: 3 QLQTRFYTDNKK-YAIDDVPFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQFLRMPLDKHMEMENISSEEVVEIEYVEKYTAPQPEQCMFHDDWISSIKGAEE-WILTGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASM-DQTILLWEWNVE 175
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_IXOSC (Ribosome biogenesis protein WDR12 homolog OS=Ixodes scapularis GN=ISCW009002 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22 Identity = 66/178 (37.08%), Postives = 98/178 (55.06%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQ--AVNPEWKSEP-FDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVD 669 ++Q +F TK VP +I + T LSS++N LL+ + +P+ +P FDFL+NGEL+R++LE+ L K I E ++ +EY++ P + +HDDWVSAV S G IL+GCYDN +W A G + GH G + SV + V+T D+T LW+ D Sbjct: 6 QIQAKFFTK-DERYSVPDTPFSIAGSTTPEQLSSLINALLKESSASPDQDEQPAFDFLINGELLRLTLEEHLETKEIPQETIVHLEYLEKCPPPSPVDSLIHDDWVSAVHASEAG-ILSGCYDNTLHIWDTATGTRRLTIPGHLGPIKSVKWVAVAEPPCTFVSTS-HDETAMLWQWD 180
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_RAT (Ribosome biogenesis protein WDR12 OS=Rattus norvegicus GN=Wdr12 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.190e-22 Identity = 59/176 (33.52%), Postives = 96/176 (54.55%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVDAE 675 ++Q RF T+ K V +IP+ LS+++N LL+ N K FDFL+ G+ +RM L + + + IS+E+V+E+EY++ + E+ HDDW+S++ G+ +IL+G YD R+W G + GH V V +K D L + + T DQT+ LW+ + E Sbjct: 3 QLQARFYTENKK-YAVDDVPFSIPATSEVADLSNIINKLLETKNELHKHVEFDFLIKGQFLRMPLVKHMELEDISSEEVVELEYVEKYTAPQPEQCMFHDDWISSIKGAEE-WILSGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCL-LLTASMDQTILLWEWNIE 175
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: YTM1_AJECN (Ribosome biogenesis protein YTM1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=YTM1 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.510e-21 Identity = 73/218 (33.49%), Postives = 114/218 (52.29%), Query Frame = 1 Query: 97 MDMNIETPEDQNEENSRRVQVRFKTKLKPPQK---VPSNS--IAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVD--------GS----NPG--FILTGCYDNLGRVWKAGGVCTHILE-----GHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVDAEE 678 MD + P D + S++ Q + + KL + +P ++ I +P+ L R+ LS++VNNLL++ P PF+FL+NG +R S++++L A GISAE L++EY++A+ P LHDDWVSAVD GS N G IL+ YD L R+W + GH +V ++ + +++G D+T+RLWK E Sbjct: 1 MDGLEDGPLDASTATSQKPQRQVRLKLTSRHEDIALPESTGPILVPTGLRRYALSTLVNNLLESEKPI----PFEFLINGTYLRTSIDEYLTANGISAETTLDVEYVRALVPPLHVASFLHDDWVSAVDVLSDTSIAGSKSRVNAGQERILSASYDGLLRMWNMSSETIALSPAAREGGHTASVKCARMVSPSQI----ISSGL-DRTVRLWKYTESE 209
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_MOUSE (Ribosome biogenesis protein WDR12 OS=Mus musculus GN=Wdr12 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.510e-21 Identity = 57/177 (32.20%), Postives = 98/177 (55.37%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVDAEE 678 ++Q RF ++ K V +IP+ LS+++N LL+ N K FDFL+ G+ +R+ L + + + IS+E+V+E+EY++ + E+ HDDW+S+++G+ +IL+G YD R+W G + GH V V +K D L + + T DQT+ LW+ + E+ Sbjct: 3 QLQARFYSENKK-YAVDDVPFSIPAAAEVADLSNIINKLLETKNELHKHVEFDFLIKGQFLRVPLVKHMELENISSEEVVELEYVEKYTAPQPEQCMFHDDWISSIEGAEE-WILSGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCL-LLTASMDQTVLLWEWNVEK 176 The following BLAST results are available for this feature:
BLAST of FC868986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868986 ID=FC868986; Name=FC868986; organism=Citrus clementina; type=EST; length=736bpback to top |