FC868987

Overview
NameFC868987
Unique NameFC868987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12
Identity = 55/171 (32.16%), Postives = 82/171 (47.95%), Query Frame = 3
Query:  210 GIRWGSVSLQGLREEMEDG--AVIQ-SDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECV------AALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGG 695
            G+R+G  S+QG R EMED   AV+    GL+ +SF AV+DGH G     +    L +         AA + G  L     + +K G++  F   D  + N+ ++    D SG+TA  V I    ++  + GD   VL R G+    T  H+P      + +E  RI+ AGG
Sbjct:   21 GLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALE-LSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKP-----CNPREKERIQNAGG 185          
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12
Identity = 45/163 (27.61%), Postives = 81/163 (49.69%), Query Frame = 3
Query:  219 WGSVSLQGLREEMEDGAVIQSDGLDG--FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGGWI 701
            +G  S  G R  MED    + D +DG       VFDGHGG    ++++  L+          LL   K     K  + +A+++ D +   +LE ++ +++ G+TA+   +  D LF++++GD   ++ R G A  ++  H+P         E +RI +AGG++
Sbjct:   28 YGYASSPGKRASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSH--------LLRHPKFISDTKVAIDDAYKSTDSE---FLESDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKP-----DQTDERQRIEDAGGFV 174          
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12
Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 3
Query:  213 IRWGSVSLQGLREEMEDGAVIQSDGLDG--FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGG 695
            ++ G  S +G R  MED   ++   +DG   S   VFDGHGG    ++L++ L++         LL   +     K  + E ++  D   L   E NA  D+    +T V +G   L+++++GD   V+S+ GKA  L+  H+P  S      E +RI  AGG
Sbjct:  110 LKCGYSSFRGKRATMEDFYDVKLTEIDGQAVSLFGVFDGHGGPRAAEYLKENLFEN--------LLKHPEFLTDTKLAISETYQKTDTDFLE-SESNAFRDDGSTASTAVLVGGH-LYVANVGDSRAVVSKAGKAMALSEDHKPNRS-----DERKRIENAGG 257          
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12
Identity = 48/163 (29.45%), Postives = 73/163 (44.79%), Query Frame = 3
Query:  213 IRWGSVSLQGLREEMEDGAVIQSDGLDG--FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGG 695
            + WG  S QG R  MED   I+S  ++G   S   VFDGHGG    ++L+  L+K         L+   K     K  + + F   D   L  +  +   D+       + IG   L+++++GD   V  + GKA  L+  H+P         E +RI +AGG
Sbjct:  121 LSWGYSSFQGRRPSMEDRLSIKSTTVNGETVSLFGVFDGHGGPRAAEYLKKHLFKN--------LVKHPKFLKDTKLAINQTFLKTDADFLQSISSDRYRDDGSTAVAAILIGNR-LYVANVGDSRAVALKAGKAVPLSEDHKPN-----KKDERKRIEDAGG 269          
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11
Identity = 47/160 (29.38%), Postives = 78/160 (48.75%), Query Frame = 3
Query:  222 GSVSLQGLREEMEDGAVIQSDGLDG--FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGG 695
            G  S +G R  MED   I+S  +D    S   +FDGHGG    ++L++ L++         L+   +     K  + E ++  D + L+  E +   D+    +T V +G   L+++++GD   V+S+ GKA  L+  H+P  S      E +RI  AGG
Sbjct:  231 GYSSFRGKRASMEDFYDIKSSKIDDKQISLFGIFDGHGGSRAAEYLKEHLFEN--------LMKHPEFMTNTKLAISETYKKTDSEFLD-SESHTHRDDGSTASTAVLVGNH-LYVANVGDSRAVISKAGKAIALSEDHKPNRS-----DERKRIESAGG 375          
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11
Identity = 46/163 (28.22%), Postives = 79/163 (48.47%), Query Frame = 3
Query:  219 WGSVSLQGLREEMEDGAVIQSDGLDGFSFA--AVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGGWI 701
            +G  S  G R  MED    + DG+DG +     VFDGHGG    ++++  L+          L+   K    IK  + E + + D + L     ++   ++G+TA+   +  D L ++++GD   V+ R G A  ++  H+P  S      E +RI +AGG++
Sbjct:   83 YGYASAPGKRASMEDFYETRIDGVDGETIGLFGVFDGHGGARAAEYVKQHLFSN--------LIKHPKFISDIKSAIAETYNHTDSEFLK--AESSHTRDAGSTASTAILVGDRLLVANVGDSRAVVCRGGDAIAVSRDHKPDQS-----DERQRIEDAGGFV 230          
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: P2C74_ORYSJ (Probable protein phosphatase 2C 74 OS=Oryza sativa subsp. japonica GN=Os11g0242200 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 53/174 (30.46%), Postives = 82/174 (47.13%), Query Frame = 3
Query:  204 VAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFS---FAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLL----SGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGGWIS 704
            V G  +   S +GLR  MEDG  + +  ++G S   F  V+DGHGG + V F+   L    VAA +   L     S    D +   ++ A+   D + L+      +    GA A    +    L+++++GDC  V+SR G A  LT+ H P    + S     RI  +GG++S
Sbjct:  129 VEGEGFWVASRRGLRHAMEDGYGVITHKIEGHSQMAFYGVYDGHGGRAAVDFVAGRLGNNVVAAAEKQRLSEKASSPAAADHVAAAIRAAYLATDSEFLS------QGTRGGACAATALVIDGDLYVANLGDCRAVISRHGAAAALTSDHTPARDDERS-----RIESSGGYVS 291          
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11
Identity = 48/179 (26.82%), Postives = 83/179 (46.37%), Query Frame = 3
Query:  180 DAPSSFSGVAG---IRWGSVSLQGLREEMEDGAVIQSDGLDG--FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGGWI 701
            D P S  G++      +G  S  G R  MED    + DG++G       VFDGHGG    ++++  L+          L+   K        + +A+   D + L     N++  ++G+TA+   +  D L ++++GD   V+ R G A  ++  H+P  S      E +RI +AGG++
Sbjct:   18 DGPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKQNLFSN--------LIRHPKFISDTTAAIADAYNQTDSEFLK--SENSQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQS-----DERQRIEDAGGFV 181          
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: PPM1A_HUMAN (Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11
Identity = 52/165 (31.52%), Postives = 71/165 (43.03%), Query Frame = 3
Query:  210 GIRWGSVSLQGLREEMEDG--AVIQ-SDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGG 695
            G+R+G  S+QG R EMED   AVI    GL+ +SF AV+DGH G    K+  + L                   + +K G++  F   D  +    E     D SG+TA  V I     +  + GD   +L R  K    T  H+P         E  RI+ AGG
Sbjct:   21 GLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNP-----LEKERIQNAGG 180          
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11
Identity = 53/168 (31.55%), Postives = 80/168 (47.62%), Query Frame = 3
Query:  210 GIRWGSVSLQGLREEMEDGAV--IQSDGLD-GFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLN-WLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGGWI 701
            G+R+G+ + QG R  MED     +   GL  G++  AV DGHGG    +F    L    +  L         + + +++ L+ AF +AD +L + W  +    +  G TA V+ +    L+++H GD   VLSR G     T  HRP     +  +E  RI  AGG I
Sbjct:   64 GLRFGASAAQGWRARMEDAHCTWLSLPGLPPGWALFAVLDGHGGARAARFGARHLPGHVLQELGP----EPSEPEGVREALRRAFLSADERLRSLWPRV----ETGGCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRP-----LRPRERERIHAAGGTI 218          
The following BLAST results are available for this feature:
BLAST of FC868987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
PPM1B_HUMAN2.027e-1232.16Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE... [more]
P2C45_ORYSJ2.648e-1227.61Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C13_ORYSJ4.516e-1230.67Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
P2C55_ORYSJ7.703e-1229.45Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]
P2C52_ORYSJ1.006e-1129.38Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C10_ORYSJ1.314e-1128.22Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C74_ORYSJ1.716e-1130.46Probable protein phosphatase 2C 74 OS=Oryza sativa... [more]
P2C59_ARATH2.927e-1126.82Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
PPM1A_HUMAN3.823e-1131.52Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE... [more]
PPMBL_HUMAN6.521e-1131.55Probable protein phosphatase 1B-like OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionC31007C10EF AbioticL1 Citrus clementina cDNA clone C31007C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868987 ID=FC868987; Name=FC868987; organism=Citrus clementina; type=EST; length=705bp
GGAACTCACTCCTTCAAACTCGCTGAGTCAGTCAATTAATGGCGTTGCTG
AACCAACAGTTACAGAGGTTTCTCTTAACAAGGCTCAACTATAACTTCAA
GCCCACCGTCAAAAACAACCTTGTCAATACAACAACAGCAAGAGCTAAAA
GCCAGTGCTACTGCTCGGCGATTGCAATAGACGCGCCGTCTTCGTTCAGT
GGTGTTGCCGGAATCCGATGGGGGTCTGTAAGTTTACAGGGCCTACGTGA
GGAAATGGAGGATGGTGCTGTTATTCAATCGGATGGCCTTGATGGGTTCT
CTTTTGCAGCTGTTTTTGATGGCCATGGTGGAGTCTCTACTGTCAAGTTT
CTTAGGGATGAGCTATACAAAGAATGTGTTGCAGCTTTACAAGGAGGATT
GCTGTTGAGTGGAAAAGATTTTGATGCCATTAAGAAGGGATTACAGGAGG
CTTTTGAAAATGCTGATATGAAATTGTTGAATTGGCTTGAAATGAATGCG
GAGGAGGATGAATCTGGTGCAACCGCTACTGTTGTGTTCATTGGAAGGGA
TATTTTGTTCATCTCACATATTGGTGACTGTTGTGTGGTTCTATCTCGTA
CTGGAAAAGCAGATGTATTGACTAATCCTCATCGGCCTTATGGAAGCAGC
CAGGTCTCACTTCAGGAAATTAGAAGAATCAGAGAAGCGGGCGGATGGAT
TTCCA
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