FC868987
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: PPM1A_RAT (Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm1a PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 52/165 (31.52%), Postives = 71/165 (43.03%), Query Frame = 3 Query: 210 GIRWGSVSLQGLREEMEDG--AVIQ-SDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGG 695 G+R+G S+QG R EMED AVI GL+ +SF AV+DGH G K+ + L + +K G++ F D + E D SG+TA V I + + GD +L R K T H+P E RI+ AGG Sbjct: 21 GLRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNP-----LEKERIQNAGG 180
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: PPM1A_RABIT (Protein phosphatase 1A OS=Oryctolagus cuniculus GN=PPM1A PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 52/165 (31.52%), Postives = 71/165 (43.03%), Query Frame = 3 Query: 210 GIRWGSVSLQGLREEMEDG--AVIQ-SDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGG 695 G+R+G S+QG R EMED AVI GL+ +SF AV+DGH G K+ + L + +K G++ F D + E D SG+TA V I + + GD +L R K T H+P E RI+ AGG Sbjct: 21 GLRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNP-----LEKERIQNAGG 180
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: PPM1A_MOUSE (Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 52/165 (31.52%), Postives = 71/165 (43.03%), Query Frame = 3 Query: 210 GIRWGSVSLQGLREEMEDG--AVIQ-SDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGG 695 G+R+G S+QG R EMED AVI GL+ +SF AV+DGH G K+ + L + +K G++ F D + E D SG+TA V I + + GD +L R K T H+P E RI+ AGG Sbjct: 21 GLRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFRGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNP-----LEKERIQNAGG 180
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 46/163 (28.22%), Postives = 76/163 (46.63%), Query Frame = 3 Query: 222 GSVSLQGLREEMEDGAVIQSDGLDG--FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGKADVLTNPHRPYGSSQVSLQEIRRIREAGGWIS 704 G S +G R MED I+S +D + +FDGHGG + L+ L++ LL K + E + D L+ E N ++ +T +F+G I +++++GD V+S+ GKA L++ H+P E +RI AGG ++ Sbjct: 117 GYSSFRGRRANMEDFYDIKSSKVDDNQINLFGIFDGHGGSHAAEHLKKHLFEN--------LLKHPSFITDTKSAISETYRKTDSDFLD-AETNINREDGSTASTAIFVGNHI-YVANVGDSRTVMSKAGKAIALSSDHKPNRK-----DERKRIENAGGVVT 264
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: ILKAP_MOUSE (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Mus musculus GN=Ilkap PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 52/182 (28.57%), Postives = 86/182 (47.25%), Query Frame = 3 Query: 198 SGVAGIRWGSVSLQGLREEMEDGAVIQSDG----------LDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGK------ADVLTNPHRPYGSSQVSLQEIRRIREAGG 695 S + G++ +G REEM+D VI +D + S+ AVFDGHGG+ KF L++ + G ++S + +K+ L + F++ D + L + G+TAT V +IL+I+++GD +L R + A L+ H P +E RI++AGG Sbjct: 102 SVIFGLKGYVAERKGEREEMQDAHVILNDITQECNPPSSLITRVSYFAVFDGHGGIRASKFAAQNLHQNLIRKFPKGDIISVEK--TVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNP-----TQYEERMRIQKAGG 276
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: ILKAP_RAT (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Rattus norvegicus GN=Ilkap PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 52/182 (28.57%), Postives = 86/182 (47.25%), Query Frame = 3 Query: 198 SGVAGIRWGSVSLQGLREEMEDGAVIQSDG----------LDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGK------ADVLTNPHRPYGSSQVSLQEIRRIREAGG 695 S + G++ +G REEM+D VI +D + S+ AVFDGHGG+ KF L++ + G ++S + +K+ L + F++ D + L + G+TAT V +IL+I+++GD +L R + A L+ H P +E RI++AGG Sbjct: 102 SVIFGLKGYVAERKGEREEMQDAHVILNDITQECNPPSSLITRVSYFAVFDGHGGIRASKFAAQNLHQNLIRKFPKGDVISVEK--TVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNP-----TQYEERMRIQKAGG 276
BLAST of FC868987 vs. ExPASy Swiss-Prot
Match: ILKAP_HUMAN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Homo sapiens GN=ILKAP PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 52/182 (28.57%), Postives = 86/182 (47.25%), Query Frame = 3 Query: 198 SGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDG----------FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKGLQEAFENADMKLLNWLEMNAEEDESGATATVVFIGRDILFISHIGDCCVVLSRTGK------ADVLTNPHRPYGSSQVSLQEIRRIREAGG 695 S + G++ +G REEM+D VI +D + S+ AVFDGHGG+ KF L++ + G ++S + +K+ L + F++ D + L + G+TAT V +IL+I+++GD +L R + A L+ H P +E RI++AGG Sbjct: 102 SVIFGLKGYVAERKGEREEMQDAHVILNDITEECRPPSSLITRVSYFAVFDGHGGIRASKFAAQNLHQNLIRKFPKGDVISVEK--TVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNP-----TQYEERMRIQKAGG 276 The following BLAST results are available for this feature:
BLAST of FC868987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868987 ID=FC868987; Name=FC868987; organism=Citrus clementina; type=EST; length=705bpback to top |