FC868991

Overview
NameFC868991
Unique NameFC868991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868991 vs. ExPASy Swiss-Prot
Match: NAC5_ARATH (NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.625e-25
Identity = 67/163 (41.10%), Postives = 93/163 (57.06%), Query Frame = 1
Query:  163 PLGFRFRPTDEELINHYLRLK-INGRDSEV-EVIPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQ-AAFVLCRLFRKPEEK 642
            P+GFRFRPTD E+++ YLR K +    S V EVI  +D+C  +PWDLP  S +KT D  W+FF  ++ KY  G R  R T++G+WK TG    I  RK G    IG K+ LVF   +   G +++W MHEY  T        + P+Q   + LC++  K E +
Sbjct:    4 PVGFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVDICSFDPWDLPSHSRMKTRDQVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDI-MRKTGDREKIGEKRVLVF---KNHGGSKSDWAMHEYHAT-------FSSPNQIMTYTLCKVKFKGERR 155          
BLAST of FC868991 vs. ExPASy Swiss-Prot
Match: NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25
Identity = 58/136 (42.65%), Postives = 85/136 (62.50%), Query Frame = 1
Query:  154 ESLPLGFRFRPTDEELINHYLRLKINGRDSEVE-VIPEIDVCKLEPWDLPGLSV--IKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYR 552
            E L +GFRF PT+ EL+ +YLR+++ G ++ +  +IP +DV  +EP  LP L+    + +  +W FF PR  +   G R +R T +GYWKATG    + S     N  IG+KKT+VFY G+AP G +T W M+EY+
Sbjct:    3 EELSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPD---NRVIGVKKTMVFYTGKAPTGRKTKWKMNEYK 135          
BLAST of FC868991 vs. ExPASy Swiss-Prot
Match: NAC1_ARATH (NAC domain-containing protein 1 OS=Arabidopsis thaliana GN=NAC001 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24
Identity = 67/170 (39.41%), Postives = 96/170 (56.47%), Query Frame = 1
Query:  166 LGFRFRPTDEELINHYLRLKINGRDS-EVEV-IPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSR----KAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLS 657
            +GF FRP DEEL+ HYLR KI G  S +VEV I E+++C  +PW+L   S  K+ D  W+FF  R+     G R +R T +G WK TG+   ++ +      G    IG K+ LVF  GR P   +++W++HE+     DLL       Q  +V+CRL  K ++  D+LS
Sbjct:    5 VGFGFRPNDEELVGHYLRNKIEGNTSRDVEVAISEVNICSYDPWNLRFQSKYKSRDAMWYFFSRRENN--KGNRQSRTTVSGKWKLTGESVEVKDQWGFCSEGFRGKIGHKRVLVFLDGRYPDKTKSDWVIHEF---HYDLLPE----HQRTYVICRLEYKGDD-ADILS 164          
BLAST of FC868991 vs. ExPASy Swiss-Prot
Match: NAC3_ARATH (NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21
Identity = 57/132 (43.18%), Postives = 84/132 (63.64%), Query Frame = 1
Query:  163 PLGFRFRPTDEELINHYLRLKINGRD-SEVE-VIPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTI-RSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEY 549
            P+G RF PTDEE++  YL  K + RD S V+  I  + VC+L+PW+LP  S IK +D  W FF P++ KY  G +  R T++G+WK+TG+ + I R+R+      IG KK L+FY     K  +++W++HEY
Sbjct:    4 PVGLRFCPTDEEIVVDYLWPKNSDRDTSHVDRFINTVPVCRLDPWELPCQSRIKLKDVAWCFFRPKENKYGRGDQQMRKTKSGFWKSTGRPKPIMRNRQQ-----IGEKKILMFY---TSKESKSDWVIHEY 127          
The following BLAST results are available for this feature:
BLAST of FC868991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC5_ARATH1.625e-2541.10NAC domain-containing protein 5 OS=Arabidopsis tha... [more]
NAC61_ARATH6.176e-2542.65Putative NAC domain-containing protein 61 OS=Arabi... [more]
NAC1_ARATH4.003e-2439.41NAC domain-containing protein 1 OS=Arabidopsis tha... [more]
NAC3_ARATH1.424e-2143.18NAC domain-containing protein 3 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC31007D02EF AbioticL1 Citrus clementina cDNA clone C31007D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868991 ID=FC868991; Name=FC868991; organism=Citrus clementina; type=EST; length=708bp
GGAGTGCAGAGAGAGAAGAAAGCGAGAGACAGATACAATACAAACAACAG
AATTGCACAAAAATTTGGTAAAGTGAAAAAAAAGCTAAGAAATTGAACAT
CTGAATTTCTGTCTGAGATTAATTAGTAGAAGAAGATGGCAGTAATATCG
ATGGAATCTCTGCCGTTGGGTTTCAGATTCAGACCGACAGACGAGGAACT
GATCAACCACTACCTTAGATTAAAGATCAACGGCCGTGATTCGGAGGTCG
AGGTTATTCCCGAGATCGATGTTTGCAAACTGGAGCCGTGGGACTTGCCT
GGATTATCGGTGATAAAGACAGAAGATCCAGAGTGGTTCTTTTTCTGCCC
GCGCGATAGAAAATACCCGAACGGGCTTCGTTCGAATCGTGCAACAGAAG
CTGGATACTGGAAAGCTACGGGCAAGGATCGCACCATAAGGAGCCGAAAG
GCGGGGACTAATGCATGCATAGGAATGAAAAAGACATTGGTGTTTTATAG
GGGTCGTGCTCCTAAAGGTGAACGCACCAATTGGATCATGCACGAGTACC
GCCCCACCCGTGAAGATCTCCTAGATAGCTCTACCAAGCCTAGTCAGGCT
GCATTTGTCCTCTGTCGCTTGTTCAGGAAGCCAGAAGAGAAGGTCGATGT
CCTAAGTATGACGAAGTGGAACAACAGAATCTCCTGATACAATAAATCAT
CTCTTGAT
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