FC868992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868992 vs. ExPASy Swiss-Prot
Match: TLP2_ORYSJ (Tubby-like F-box protein 2 OS=Oryza sativa subsp. japonica GN=TULP2 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.423e-37 Identity = 74/140 (52.86%), Postives = 95/140 (67.86%), Query Frame = 1 Query: 271 WANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNF 690 W+ L +LL +IL +EA WP RR VVACA VCR WR + +V+ P SG +TFP S+KQPGPRD +QCFIKRN+ T+ LYL LT L DD KFLLAAR+CRR +Y I+++SD + GS + +G L+SNF Sbjct: 51 WSALVPDLLADILRCVEAGSERWPPRRDVVACASVCRRWRDVAVAVVQPPLESGKITFPSSLKQPGPRDAPMQCFIKRNKKNSTFFLYLGLTQELTDDEKFLLAARRCRRGLHKEYAITINSDGLFHGSQSCVGNLKSNF 190
BLAST of FC868992 vs. ExPASy Swiss-Prot
Match: TLP10_ORYSJ (Tubby-like F-box protein 10 OS=Oryza sativa subsp. japonica GN=TULP10 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.204e-36 Identity = 69/141 (48.94%), Postives = 101/141 (71.63%), Query Frame = 1 Query: 271 WANLPQELLREILAKIEAADSA-WPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNF 690 W L EL+ E++ ++EA+ WP+R+ +V+CA VCR WR+ +V+ SG +TFP S+KQPGP+D+ +QCF+KRN+ ++LYL L N D GKFL+AAR+ RR T+Y+ISL +DD+S+GS+ Y+GKLRS+F Sbjct: 24 WGGLLPELVEEVVRRVEASGGERWPARKDLVSCACVCRRWREAAAAVVRPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKKSMFYLYLGLLNGTMDKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDF 164
BLAST of FC868992 vs. ExPASy Swiss-Prot
Match: TLP4_ARATH (Putative Tubby-like protein 4 OS=Arabidopsis thaliana GN=TULP4 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.022e-27 Identity = 53/86 (61.63%), Postives = 71/86 (82.56%), Query Frame = 1 Query: 280 LPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYL 537 +P ELLR++L +IE ++ WPSR++VV+C GVC++WRQI KEIV VPE+S TFPIS+KQPGP L+QC++KRNRS QT++LYL Sbjct: 1 MPPELLRDVLMRIERSEDTWPSRKNVVSCVGVCKNWRQIFKEIVNVPEVSSKFTFPISLKQPGPGGSLVQCYVKRNRSNQTFYLYL 86 The following BLAST results are available for this feature:
BLAST of FC868992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868992 ID=FC868992; Name=FC868992; organism=Citrus clementina; type=EST; length=714bpback to top |