FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.399e-38
Identity = 77/144 (53.47%), Postives = 103/144 (71.53%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            HF++ +K K  KD+  + RA+++LR   E+AKR LSS  Q  IEI+S YEG DF  T+TRA+FEELNMDLFR  M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE  + INPDE           +LSG+
Sbjct:  265 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 408          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_PONAB (78 kDa glucose-regulated protein OS=Pongo abelii GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.399e-38
Identity = 77/144 (53.47%), Postives = 103/144 (71.53%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            HF++ +K K  KD+  + RA+++LR   E+AKR LSS  Q  IEI+S YEG DF  T+TRA+FEELNMDLFR  M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE  + INPDE           +LSG+
Sbjct:  265 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 408          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_HUMAN (78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 1.399e-38
Identity = 77/144 (53.47%), Postives = 103/144 (71.53%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            HF++ +K K  KD+  + RA+++LR   E+AKR LSS  Q  IEI+S YEG DF  T+TRA+FEELNMDLFR  M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE  + INPDE           +LSG+
Sbjct:  265 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 408          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_BOVIN (78 kDa glucose-regulated protein OS=Bos taurus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.399e-38
Identity = 77/144 (53.47%), Postives = 103/144 (71.53%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            HF++ +K K  KD+  + RA+++LR   E+AKR LSS  Q  IEI+S YEG DF  T+TRA+FEELNMDLFR  M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE  + INPDE           +LSG+
Sbjct:  266 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 409          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7D_CAEEL (Heat shock 70 kDa protein D OS=Caenorhabditis elegans GN=hsp-4 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 1.827e-38
Identity = 77/146 (52.74%), Postives = 106/146 (72.60%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGN 438
            +F++ +K K+ KD+  + RA+++LR   E+AKR LS+  QT IEI+SL++G DF  T+TRA+FEELNMDLFR  ++PV+K L DA M K+ VH++VLVGGSTRIPKVQQL++D+FNGKE  + INPDE           ++ G  N
Sbjct:  267 YFIKLYKKKSGKDLRKDNRAVQKLRREVEKAKRALSTQHQTKIEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDADMKKTDVHEIVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGGVEN 412          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 2.386e-38
Identity = 75/144 (52.08%), Postives = 106/144 (73.61%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            +F++ +K K+ KD+  + RA+++LR   E+AKR LS+  QT +EI+SL++G DF  T+TRA+FEELNMDLFR  ++PV+K L D+ + K  VH++VLVGGSTRIPKVQQL+++FFNGKE  + INPDE           ++SGE
Sbjct:  270 YFIKLYKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE 413          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 2.386e-38
Identity = 75/144 (52.08%), Postives = 106/144 (73.61%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            +F++ +K K+ KD+  + RA+++LR   E+AKR LS+  QT +EI+SL++G DF  T+TRA+FEELNMDLFR  ++PV+K L D+ + K  VH++VLVGGSTRIPKVQQL+++FFNGKE  + INPDE           ++SGE
Sbjct:  270 YFIKLYKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE 413          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_CANGA (78 kDa glucose-regulated protein homolog OS=Candida glabrata GN=KAR2 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 2.386e-38
Identity = 81/150 (54.00%), Postives = 104/150 (69.33%), Query Frame = 1
Query:    7 VQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            ++ FK K+  D+S N +AL +L+   E+AKR LSS   T IEIDS  +GID   T+TRA+FEELN+DLF+K ++PVEK L DA ++K  + D VLVGGSTRIPKVQQLL+ FFNGK+  K INPDE           +LSGE  E V+D+
Sbjct:  273 IKTFKKKHGIDVSDNEKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLEDAGLEKKDIDDFVLVGGSTRIPKVQQLLESFFNGKKASKGINPDEAVAYGAAVQAGVLSGE--EGVEDI 420          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_RAT (78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 4.069e-38
Identity = 76/144 (52.78%), Postives = 103/144 (71.53%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            HF++ +K K  KD+  + RA+++LR   E+AKR LSS  Q  IEI+S +EG DF  T+TRA+FEELNMDLFR  M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE  + INPDE           +LSG+
Sbjct:  265 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 408          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_MOUSE (78 kDa glucose-regulated protein OS=Mus musculus GN=Hspa5 PE=1 SV=3)

HSP 1 Score: 156.762 bits (395), Expect = 4.069e-38
Identity = 76/144 (52.78%), Postives = 103/144 (71.53%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            HF++ +K K  KD+  + RA+++LR   E+AKR LSS  Q  IEI+S +EG DF  T+TRA+FEELNMDLFR  M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE  + INPDE           +LSG+
Sbjct:  266 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 409          
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_SPETR1.399e-3853.4778 kDa glucose-regulated protein OS=Spermophilus t... [more]
GRP78_PONAB1.399e-3853.4778 kDa glucose-regulated protein OS=Pongo abelii G... [more]
GRP78_HUMAN1.399e-3853.4778 kDa glucose-regulated protein OS=Homo sapiens G... [more]
GRP78_BOVIN1.399e-3853.4778 kDa glucose-regulated protein OS=Bos taurus GN=... [more]
HSP7D_CAEEL1.827e-3852.74Heat shock 70 kDa protein D OS=Caenorhabditis eleg... [more]
HSP7C_CAEEL2.386e-3852.08Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
HSP7C_CAEBR2.386e-3852.08Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]
GRP78_CANGA2.386e-3854.0078 kDa glucose-regulated protein homolog OS=Candid... [more]
GRP78_RAT4.069e-3852.7878 kDa glucose-regulated protein OS=Rattus norvegi... [more]
GRP78_MOUSE4.069e-3852.7878 kDa glucose-regulated protein OS=Mus musculus G... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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