FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP77_HUMAN (Putative heat shock 70 kDa protein 7 OS=Homo sapiens GN=HSPA7 PE=5 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.335e-37
Identity = 71/100 (71.00%), Postives = 85/100 (85.00%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGG 300
            HF++EF+ K+ KD+SGN RALRRLRTACERAKRT SS+ Q T+EIDSL+EG+DFY +ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD VL GG
Sbjct:  242 HFMEEFRRKHGKDLSGNKRALRRLRTACERAKRTPSSSTQATLEIDSLFEGVDFYKSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDFVLGGG 341          

HSP 2 Score: 27.7202 bits (60), Expect = 2.335e-37
Identity = 15/26 (57.69%), Postives = 15/26 (57.69%), Query Frame = 3
Query:  294 GWFH*DSQGATAFARLLQWQGALQEH 371
            G  H   QGA   A LLQ QGA QEH
Sbjct:  340 GGLHSHPQGAEVAAGLLQRQGAEQEH 365          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.638e-37
Identity = 74/144 (51.39%), Postives = 103/144 (71.53%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            HF++ +K K  KD+  + RA+++LR   E+AKR LS+  Q+ IEI+S +EG DF  T+TRA+FEELNMDLFR  M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++ FNGKE  + INPDE           +LSG+
Sbjct:  266 HFIKLYKKKTGKDVRADKRAVQKLRREVEKAKRALSAQHQSRIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLDDSDLKKSDIDEIVLVGGSTRIPKIQQLVKELFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 409          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_DEBHA (78 kDa glucose-regulated protein homolog OS=Debaryomyces hansenii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 5.876e-37
Identity = 79/147 (53.74%), Postives = 104/147 (70.75%), Query Frame = 1
Query:   16 FKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            FK K+  DISGN +A+ +L+   E+AKRTLSS   T IEIDS  +GIDF  T++RA+FEELN++ F+K ++PV++ L+DA   KS V D+VLVGGSTRIPKVQ+LL+ FF+GK+  K INPDE           +LSGE  E V D+
Sbjct:  289 FKKKHNIDISGNSKAISKLKRETEKAKRTLSSQMSTRIEIDSFVDGIDFSETLSRAKFEELNIESFKKTLKPVQQVLKDAGFKKSDVDDIVLVGGSTRIPKVQELLEKFFDGKKASKGINPDEAVAYGAAVQAGVLSGE--EGVHDI 433          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_ECHGR (78 kDa glucose-regulated protein OS=Echinococcus granulosus GN=GRP78 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 4.975e-36
Identity = 74/143 (51.75%), Postives = 101/143 (70.63%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSG 429
            +FV+ +K K  KDI+ + RA+++LR   E+AKRTLS+   T IEID+L+EG DF   +TRARFEELN DLFR  ++PV K + D+ + K  + D+VLVGGSTRIPK+QQL+++FFNGKE  + INPDE           ++SG
Sbjct:  264 YFVKLYKKKEGKDITKDDRAVQKLRREVEKAKRTLSTEHSTMIEIDNLFEGKDFSEPLTRARFEELNNDLFRSTLKPVMKVMEDSGLKKEDIDDIVLVGGSTRIPKIQQLVKEFFNGKEPIRGINPDEAVAYGAAVQAGVISG 406          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 4.975e-36
Identity = 73/144 (50.69%), Postives = 101/144 (70.14%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            HF++ +K K  KDI  + RA+++LR   E+AKR LSS  Q  +EI+S ++G DF  ++TRA+FEELNMDLFR  M+PV++ L DA +    + ++VLVGGSTRIPKVQQL++++FNGKE  + INPDE           +LSGE
Sbjct:  274 HFIKLYKKKKGKDIRKDNRAVQKLRREVEKAKRALSSAHQVRLEIESFFDGEDFSESLTRAKFEELNMDLFRSTMKPVKQVLEDADLKTDDIDEIVLVGGSTRIPKVQQLVKEYFNGKEPSRGINPDEAVAYGAAVQAGVLSGE 417          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_ECHMU (78 kDa glucose-regulated protein OS=Echinococcus multilocularis GN=GRP78 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 5.500e-35
Identity = 73/143 (51.05%), Postives = 100/143 (69.93%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSG 429
            +FV+ +K K  KDI+ + RA+++LR   E+AKRTLS+   T IEID+L+EG DF   +TRARFEELN DLFR  ++PV K + D+ + K  + D+VLVGGSTRIPK+QQL+++FFN KE  + INPDE           ++SG
Sbjct:  264 YFVKLYKKKEGKDITKDDRAVQKLRREVEKAKRTLSTEHSTMIEIDNLFEGKDFSEPLTRARFEELNNDLFRSTLKPVMKVMEDSGLKKEDIDDIVLVGGSTRIPKIQQLVKEFFNVKEPSRGINPDEAVAYGAAVQAGVISG 406          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.018e-33
Identity = 73/146 (50.00%), Postives = 100/146 (68.49%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQ--DFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            +F++ FK KN  D+  + RA+++LR   E AKR LS    T IEI+ + EG +F  T+TRA+FEELN DLFR+ +EPV+K L DAK +KS + ++VLVGGSTRIPK+QQ+++  +FFNGKE  + INPDE           I+ GE
Sbjct:  263 YFIKMFKKKNNIDLRTDKRAIQKLRKEVEIAKRNLSVVHSTQIEIEDIVEGHNFSETLTRAKFEELNDDLFRETLEPVKKVLDDAKYEKSKIDEIVLVGGSTRIPKIQQIIKEFEFFNGKEPNRGINPDEAVAYGAAIQAGIILGE 408          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: GRP78_SCHPO (78 kDa glucose-regulated protein homolog OS=Schizosaccharomyces pombe GN=bip1 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 5.148e-33
Identity = 69/144 (47.92%), Postives = 99/144 (68.75%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            +  + +  KN  D++ + +A+ +L+   E+AKRTLSS     IEI+S + G DF  T++RA+FEE+NMDLF+K ++PVE+ L+D+ + KS + D+VLVGGSTRIPKVQ+LL+ FF GK+  K INPDE           +LSGE
Sbjct:  270 YLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGE 412          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HS7C5_DICDI (Heat shock 70-related protein 5 OS=Dictyostelium discoideum GN=DDB_G0285709 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.951e-25
Identity = 57/130 (43.85%), Postives = 86/130 (66.15%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKE--LCKNINPDE 384
            HF QEF  K + D++ N R+  +L++ACE+AKR LS+  Q  +EIDSLY+G DF++ ITRARFE++   L +  +  V + L    M K  V  V+LVGG++RIP VQ  L +FF+ ++  L +++N +E
Sbjct:  252 HFTQEFNRKYRCDLTDNARSKAKLKSACEKAKRNLSNMTQAALEIDSLYDGRDFFTNITRARFEDMASGLIKGSINAVSQLLEKCNMTKEQVDKVLLVGGASRIPSVQNQLLNFFDNRQDILERSMNQEE 381          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7A_DROSI (Heat shock 70 kDa protein cognate 1 (Fragments) OS=Drosophila simulans GN=Hsc70-1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.961e-24
Identity = 53/72 (73.61%), Postives = 63/72 (87.50%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFR 216
            H VQEF+ K+ KD+  N RALRRLRTACERAKRTLSS+ Q +IEIDSL+EG+DFY+++TRARFEELN DLFR
Sbjct:  141 HLVQEFQRKHGKDLGQNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNGDLFR 212          
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP77_HUMAN2.335e-3771.00Putative heat shock 70 kDa protein 7 OS=Homo sapie... [more]
GRP78_XENLA2.638e-3751.3978 kDa glucose-regulated protein OS=Xenopus laevis... [more]
GRP78_DEBHA5.876e-3753.7478 kDa glucose-regulated protein homolog OS=Debary... [more]
GRP78_ECHGR4.975e-3651.7578 kDa glucose-regulated protein OS=Echinococcus g... [more]
GRP78_APLCA4.975e-3650.6978 kDa glucose-regulated protein OS=Aplysia califo... [more]
GRP78_ECHMU5.500e-3551.0578 kDa glucose-regulated protein OS=Echinococcus m... [more]
GRP78_PLAFO3.018e-3350.0078 kDa glucose-regulated protein homolog OS=Plasmo... [more]
GRP78_SCHPO5.148e-3347.9278 kDa glucose-regulated protein homolog OS=Schizo... [more]
HS7C5_DICDI3.951e-2543.85Heat shock 70-related protein 5 OS=Dictyostelium d... [more]
HSP7A_DROSI1.961e-2473.61Heat shock 70 kDa protein cognate 1 (Fragments) OS... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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