FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig451 contig Ccv1_Contig451:38..493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_PROMH (Chaperone protein dnaK OS=Proteus mirabilis (strain HI4320) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 56/148 (37.84%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + V EFK +   D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  DL ++ M+PV+  L DA +  S V+DV+LVGG TR+P VQ+ + +FF GKE  K++NPDE           +L+G+
Sbjct:  239 YLVDEFKKEQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYVTADATGPKHLNIKVTRAKLESLVEDLVKRSMDPVKVALEDAGLKVSEVNDVILVGGQTRMPMVQKTVAEFF-GKEPRKDVNPDEAVAMGAAVQGGVLAGD 385          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_NEOSM (Chaperone protein dnaK OS=Neorickettsia sennetsu (strain Miyayama) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 56/145 (38.62%), Postives = 84/145 (57.93%), Query Frame = 1
Query:    7 VQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGI----DFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSG 429
            V+EFK +N  D+  +P AL+RL+ A E+AK+ LSST +T I +  +              TRA+ E L  DL  + +EP +K L+D+ + +  +++VVLVGG TR+P V + + +FF GKE  K +NPDE           IL+G
Sbjct:  235 VEEFKKENGMDLKNDPLALQRLKEAAEKAKKELSSTQETDINLPYITADAAGPKHLNVKFTRAKLESLVSDLIDRTIEPCKKALKDSGLKREEINEVVLVGGMTRMPAVVKKVTEFF-GKEPHKGVNPDEVVAIGAAIQANILAG 378          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_NEIMA (Chaperone protein dnaK OS=Neisseria meningitidis serogroup A GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID------FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSG 429
            + + EFK +   D+  +  AL+RL+ A E+AK  LSS  QT  EI+  Y  +D          ITRA+FE L  DL  + +EP    L+DA +    + DV+LVGG +R+PKVQ+ ++DFF GKE  K++NPDE           +LSG
Sbjct:  240 YIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSSGQQT--EINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGDIDDVILVGGQSRMPKVQEAVRDFF-GKEPRKDVNPDEAVAVGAAIQGEVLSG 385          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_NEIG1 (Chaperone protein dnaK OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID------FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSG 429
            + + EFK +   D+  +  AL+RL+ A E+AK  LSS  QT  EI+  Y  +D          ITRA+FE L  DL  + +EP    L+DA +    + DV+LVGG +R+PKVQ+ ++DFF GKE  K++NPDE           +LSG
Sbjct:  240 YIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSSGQQT--EINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGDIDDVILVGGQSRMPKVQEAVKDFF-GKEPRKDVNPDEAVAVGAAIQGEVLSG 385          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_MACCJ (Chaperone protein dnaK OS=Macrococcus caseolyticus (strain JCSC5402) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 53/153 (34.64%), Postives = 89/153 (58.17%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            + V+EFK +N  D+S +  A++RL+ A E+AK+ LS  + T I +  +  G    +    T++RA+FEEL+  L  + M P  + ++DA +  + + +V+LVGGSTRIP VQ+ ++    GKE  K +NPDE           +++G+  + V
Sbjct:  209 YLVEEFKKENGLDLSQDKMAMQRLKDAAEKAKKDLSGVSSTQISLPFISAGEAGPLHLEVTLSRAKFEELSHTLVERTMGPTRQAMKDAGLSNADIDEVILVGGSTRIPAVQEAIKKEL-GKEPNKGVNPDEVVAMGAAIQGGVITGDVKDVV 360          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_LACCB (Chaperone protein dnaK OS=Lactobacillus casei (strain BL23) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 56/151 (37.09%), Postives = 85/151 (56.29%), Query Frame = 1
Query:    7 VQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            V EFK  N  D+S +  A++RL+ A E+AK+ LS   QT I +  +  G    +    T+TRA+F+E+  DL  K   PVE  L+DAK+  + +  V+L GGSTR P VQ+ ++  + GK+   +INPDE           ++SG+  + V
Sbjct:  212 VAEFKKDNNIDLSKDKMAMQRLKDAAEKAKKDLSGVTQTQISLPFISAGPNGPLHLERTLTRAQFDEMTADLVAKTKIPVENALKDAKLTNADIDKVILNGGSTRTPAVQEAVKQ-WTGKDPDHSINPDEAVALGAAIQGGVISGDVKDVV 361          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_LACC3 (Chaperone protein dnaK OS=Lactobacillus casei (strain ATCC 334) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 56/151 (37.09%), Postives = 85/151 (56.29%), Query Frame = 1
Query:    7 VQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            V EFK  N  D+S +  A++RL+ A E+AK+ LS   QT I +  +  G    +    T+TRA+F+E+  DL  K   PVE  L+DAK+  + +  V+L GGSTR P VQ+ ++  + GK+   +INPDE           ++SG+  + V
Sbjct:  212 VAEFKKDNNIDLSKDKMAMQRLKDAAEKAKKDLSGVTQTQISLPFISAGPNGPLHLERTLTRAQFDEMTADLVAKTKIPVENALKDAKLTNADIDKVILNGGSTRTPAVQEAVKQ-WTGKDPDHSINPDEAVALGAAIQGGVISGDVKDVV 361          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_HALSA (Chaperone protein dnaK OS=Halobacterium salinarium GN=dnaK PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 57/153 (37.25%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H    F++++  D+  + +AL+RL  A E AK  LSS  +TT+ +  +       +     ITRA FE +  DL  + + P E+ L DA + KS + DV+LVGGSTR+P+VQ  ++D   G+E  KN+NPDE           +LSGE ++ V
Sbjct:  212 HLADNFENEHGIDLREDRQALQRLTEAAEEAKIELSSRKETTVNLPFVTATDSGPVHLEQDITRATFESITEDLIERTVGPTEQALEDAGLSKSDIDDVILVGGSTRMPQVQAQVEDLV-GQEPKKNVNPDEAVALGAAVQGGVLSGEVDDIV 363          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_HALS3 (Chaperone protein dnaK OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=dnaK PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 57/153 (37.25%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H    F++++  D+  + +AL+RL  A E AK  LSS  +TT+ +  +       +     ITRA FE +  DL  + + P E+ L DA + KS + DV+LVGGSTR+P+VQ  ++D   G+E  KN+NPDE           +LSGE ++ V
Sbjct:  212 HLADNFENEHGIDLREDRQALQRLTEAAEEAKIELSSRKETTVNLPFVTATDSGPVHLEQDITRATFESITEDLIERTVGPTEQALEDAGLSKSDIDDVILVGGSTRMPQVQAQVEDLV-GQEPKKNVNPDEAVALGAAVQGGVLSGEVDDIV 363          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_EHRSE (Chaperone protein dnaK OS=Ehrlichia sennetsu GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 56/145 (38.62%), Postives = 84/145 (57.93%), Query Frame = 1
Query:    7 VQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGI----DFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSG 429
            V+EFK +N  D+  +P AL+RL+ A E+AK+ LSST +T I +  +              TRA+ E L  DL  + +EP +K L+D+ + +  +++VVLVGG TR+P V + + +FF GKE  K +NPDE           IL+G
Sbjct:  235 VEEFKKENGMDLKNDPLALQRLKEAAEKAKKELSSTQETDINLPYITADAAGPKHLNVKFTRAKLESLVSDLIDRTIEPCKKALKDSGLKREEINEVVLVGGMTRMPAVVKKVTEFF-GKEPHKGVNPDEVVAIGAAIQANILAG 378          
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PROMH2.930e-2037.84Chaperone protein dnaK OS=Proteus mirabilis (strai... [more]
DNAK_NEOSM2.930e-2038.62Chaperone protein dnaK OS=Neorickettsia sennetsu (... [more]
DNAK_NEIMA2.930e-2040.27Chaperone protein dnaK OS=Neisseria meningitidis s... [more]
DNAK_NEIG12.930e-2040.27Chaperone protein dnaK OS=Neisseria gonorrhoeae (s... [more]
DNAK_MACCJ2.930e-2034.64Chaperone protein dnaK OS=Macrococcus caseolyticus... [more]
DNAK_LACCB2.930e-2037.09Chaperone protein dnaK OS=Lactobacillus casei (str... [more]
DNAK_LACC32.930e-2037.09Chaperone protein dnaK OS=Lactobacillus casei (str... [more]
DNAK_HALSA2.930e-2037.25Chaperone protein dnaK OS=Halobacterium salinarium... [more]
DNAK_HALS32.930e-2037.25Chaperone protein dnaK OS=Halobacterium salinarum ... [more]
DNAK_EHRSE2.930e-2038.62Chaperone protein dnaK OS=Ehrlichia sennetsu GN=dn... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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