FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_CLOK5 (Chaperone protein dnaK OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 57/150 (38.00%), Postives = 87/150 (58.00%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY------EGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            +    FK+ N  D+  +  AL+RL+ A E+AK  LSS+ QT I +  +       + ID   ++TRA+F EL  DL  + +EP++K L DA +  + ++ V+LVGGSTRIP VQ+ ++  F GKE  K +NPDE           +L+G+
Sbjct:  211 YIADTFKADNGIDLKNDKMALQRLKEAAEKAKIELSSSTQTNINLPFITADATGPKHIDM--SLTRAKFNELTQDLVDRTIEPMKKALNDAGLTINDINKVILVGGSTRIPAVQEAVKS-FTGKEPSKGVNPDECVAMGAAIQAGVLTGD 357          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_CLOK1 (Chaperone protein dnaK OS=Clostridium kluyveri (strain NBRC 12016) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 57/150 (38.00%), Postives = 87/150 (58.00%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY------EGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            +    FK+ N  D+  +  AL+RL+ A E+AK  LSS+ QT I +  +       + ID   ++TRA+F EL  DL  + +EP++K L DA +  + ++ V+LVGGSTRIP VQ+ ++  F GKE  K +NPDE           +L+G+
Sbjct:  211 YIADTFKADNGIDLKNDKMALQRLKEAAEKAKIELSSSTQTNINLPFITADATGPKHIDM--SLTRAKFNELTQDLVDRTIEPMKKALNDAGLTINDINKVILVGGSTRIPAVQEAVKS-FTGKEPSKGVNPDECVAMGAAIQAGVLTGD 357          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_CLOD6 (Chaperone protein dnaK OS=Clostridium difficile (strain 630) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 59/148 (39.86%), Postives = 84/148 (56.76%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIE---IDSLYEGIDFYST-ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            +  +EFK     D+  +  AL+RL+ A E+AK+ LSST  + I    I +  EG    +  ++RA+FEEL   L  K MEP +  L+DA +    + DV+LVGGSTRIP VQ+ ++ F  GKE  K INPDE           +L+G+
Sbjct:  211 YLAEEFKKAEGVDLRNDKMALQRLKEAAEKAKKELSSTMSSNINLPFITATAEGPKHLNIDLSRAKFEELTRGLVEKTMEPTKTALQDAGLSTGDIDDVLLVGGSTRIPAVQEAVKKFI-GKEPHKGINPDECVAAGASIQAGVLAGD 357          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTE (Chaperone protein dnaK OS=Chlorobium tepidum GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 59/148 (39.86%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIE---IDSLYEGID-FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            +   EFK +   D+  +  AL+RL+ A E+AK  LSS   T I    I +  EG       +TRA+FE ++  LF K  EP  + ++++K D   + +VVLVGGSTRIPKVQ L+++FF GKE  K++NPDE           +L G+
Sbjct:  232 YLADEFKKQEGIDLRKDAIALQRLKEAAEKAKIELSSRTDTEINLPFITATQEGPKHLVINLTRAKFEAMSAALFDKLFEPCRRAIKNSKFDIKEIDEVVLVGGSTRIPKVQALVKEFF-GKEPNKSVNPDEVVAIGAAIQGGVLQGD 378          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_BIFLI (Chaperone protein dnaK OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 56/147 (38.10%), Postives = 82/147 (55.78%), Query Frame = 1
Query:    7 VQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID-----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            V E K+K   D+S +  AL+RL+ A E+AK+ LSS+  T+I +  L    D        T+TRA FEE+  DL  +C  P    L DA +  S +  VVLVGGSTR+P V+ L+++   GKE  +++NPDE           ++ G+
Sbjct:  218 VSEVKNKYGVDLSKDKIALQRLKEAAEQAKKELSSSTSTSISMQYLAMTPDGTPVHLDETLTRAHFEEMTSDLLGRCRTPFNNVLHDAGISVSDIDHVVLVGGSTRMPAVKDLVKELTGGKEANQSVNPDEVVAVGAAVQSGVIKGD 364          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_BIFA0 (Chaperone protein dnaK OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 56/147 (38.10%), Postives = 83/147 (56.46%), Query Frame = 1
Query:    7 VQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID-----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            V E K+K   D+S +  AL+RL+ A E+AK+ LSS+  TTI +  L    D        T+TRA FEE+  DL  +C  P    L DA +  S +  V+LVGGSTR+P V++L+++   GKE  +++NPDE           ++ G+
Sbjct:  218 VGEVKNKYGVDLSKDKIALQRLKEAAEQAKKELSSSMSTTINMQYLAMTPDGTPVHLDETLTRAHFEEMTKDLLDRCRTPFNNVLADAGISVSQIDHVILVGGSTRMPAVKELVKELDGGKEANQSVNPDEVVAIGAAVQSGVIKGD 364          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_ANOFW (Chaperone protein dnaK OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 56/153 (36.60%), Postives = 88/153 (57.52%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            + V+EFK ++  D+S +  AL+RL+ A E+AK+ LS   QT I +  +       +    T+TRA+FEEL+  L  + M PV + L+DA +  + +  V+LVGGSTRIP VQ+ ++    GKE  K +NPDE           +++G+  + V
Sbjct:  209 YLVEEFKKEHGIDLSKDKMALQRLKDAAEKAKKELSGVMQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALKDAGLTPADIDKVILVGGSTRIPAVQEAIKKEI-GKEPHKGVNPDEVVAIGAAIQGGVIAGDVKDVV 360          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_ACTSZ (Chaperone protein dnaK OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20
Identity = 58/147 (39.46%), Postives = 83/147 (56.46%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSG 429
            + V EFK +   D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  DL  + MEPV+  L+DA +  S + DV+LVGG TR+P VQQ + +FF GKE  K++NPDE           +LSG
Sbjct:  239 YLVDEFKKEQGVDLRNDPLAMQRLKEAGEKAKIELSSAQQTDVNLPYITADATGPKHLNIKLTRAKLEALVEDLVARSMEPVKVALKDAGLSVSEIDDVILVGGQTRMPLVQQKVAEFF-GKEPRKDVNPDEAVAVGAAVQGGVLSG 384          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_XANCP (Chaperone protein dnaK OS=Xanthomonas campestris pv. campestris GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.827e-20
Identity = 57/148 (38.51%), Postives = 83/148 (56.08%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + V EF      D+  +P AL+RL+ A ERAK  LS++ QT + +  +             +TRA+ E L  DL +K +EP    L DA +  S +++V+LVGG TR+PKVQQ + DFF GKE  K++NPDE           +L+G+
Sbjct:  240 YLVDEFNKDQGIDLRKDPLALQRLKDAAERAKIELSTSQQTEVNLPYVTADASGPKHLNIKLTRAKLEALVEDLVKKSIEPCRTALNDAGLRASDINEVILVGGQTRMPKVQQAVADFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD 386          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_XANCB (Chaperone protein dnaK OS=Xanthomonas campestris pv. campestris (strain B100) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.827e-20
Identity = 57/148 (38.51%), Postives = 83/148 (56.08%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + V EF      D+  +P AL+RL+ A ERAK  LS++ QT + +  +             +TRA+ E L  DL +K +EP    L DA +  S +++V+LVGG TR+PKVQQ + DFF GKE  K++NPDE           +L+G+
Sbjct:  240 YLVDEFNKDQGIDLRKDPLALQRLKDAAERAKIELSTSQQTEVNLPYVTADASGPKHLNIKLTRAKLEALVEDLVKKSIEPCRTALNDAGLRASDINEVILVGGQTRMPKVQQAVADFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD 386          
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CLOK52.930e-2038.00Chaperone protein dnaK OS=Clostridium kluyveri (st... [more]
DNAK_CLOK12.930e-2038.00Chaperone protein dnaK OS=Clostridium kluyveri (st... [more]
DNAK_CLOD62.930e-2039.86Chaperone protein dnaK OS=Clostridium difficile (s... [more]
DNAK_CHLTE2.930e-2039.86Chaperone protein dnaK OS=Chlorobium tepidum GN=dn... [more]
DNAK_BIFLI2.930e-2038.10Chaperone protein dnaK OS=Bifidobacterium longum s... [more]
DNAK_BIFA02.930e-2038.10Chaperone protein dnaK OS=Bifidobacterium animalis... [more]
DNAK_ANOFW2.930e-2036.60Chaperone protein dnaK OS=Anoxybacillus flavitherm... [more]
DNAK_ACTSZ2.930e-2039.46Chaperone protein dnaK OS=Actinobacillus succinoge... [more]
DNAK_XANCP3.827e-2038.51Chaperone protein dnaK OS=Xanthomonas campestris p... [more]
DNAK_XANCB3.827e-2038.51Chaperone protein dnaK OS=Xanthomonas campestris p... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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