FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig451 contig Ccv1_Contig451:38..493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_HELP2 (Chaperone protein dnaK OS=Helicobacter pylori (strain P12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.827e-20
Identity = 55/144 (38.19%), Postives = 83/144 (57.64%), Query Frame = 1
Query:   13 EFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            EFKS+   +I  +  AL+RL+ A E AK+ LSS  +T I +  +             +TRA+FE L  DL  + +  +E  ++DA + K+ + +VV+VGGSTRIPKVQ+ ++ F N KEL K++NPDE           +L G+
Sbjct:  237 EFKSETGIEIKNDVMALQRLKEAAENAKKELSSAMETEINLPFITADATGPKHLVKKLTRAKFESLTEDLMEETISKIESVIKDAGLTKNEISEVVMVGGSTRIPKVQERVKAFIN-KELNKSVNPDEVVAVGASIQGGVLKGD 379          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_FRATT (Chaperone protein dnaK OS=Francisella tularensis subsp. tularensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.827e-20
Identity = 55/148 (37.16%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + + EFK +   D+  +  AL+R+R A E+AK  LSS  QT + +  +             +TRA+FE L  DL  + +EP +K L DA + KS + +V+LVGG TR+P VQ+ +++FF GKE  K++NPDE           +L+G+
Sbjct:  241 YLIDEFKKEQGIDLHNDKLALQRVREAAEKAKVELSSAQQTDVNLPYITADATGPKHLNIKVTRAKFESLVSDLVMRSLEPCKKALEDAGLSKSDITEVLLVGGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD 387          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_FRATO (Chaperone protein dnaK OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.827e-20
Identity = 55/148 (37.16%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + + EFK +   D+  +  AL+R+R A E+AK  LSS  QT + +  +             +TRA+FE L  DL  + +EP +K L DA + KS + +V+LVGG TR+P VQ+ +++FF GKE  K++NPDE           +L+G+
Sbjct:  241 YLIDEFKKEQGIDLHNDKLALQRVREAAEKAKVELSSAQQTDVNLPYITADATGPKHLNIKVTRAKFESLVSDLVMRSLEPCKKALEDAGLSKSDITEVLLVGGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD 387          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_FRATN (Chaperone protein dnaK OS=Francisella tularensis subsp. novicida (strain U112) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.827e-20
Identity = 55/148 (37.16%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + + EFK +   D+  +  AL+R+R A E+AK  LSS  QT + +  +             +TRA+FE L  DL  + +EP +K L DA + KS + +V+LVGG TR+P VQ+ +++FF GKE  K++NPDE           +L+G+
Sbjct:  241 YLIDEFKKEQGIDLHNDKLALQRVREAAEKAKVELSSAQQTDVNLPYITADATGPKHLNIKVTRAKFESLVSDLVMRSLEPCKKALEDAGLSKSDITEVLLVGGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD 387          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_FRATH (Chaperone protein dnaK OS=Francisella tularensis subsp. holarctica (strain LVS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.827e-20
Identity = 55/148 (37.16%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + + EFK +   D+  +  AL+R+R A E+AK  LSS  QT + +  +             +TRA+FE L  DL  + +EP +K L DA + KS + +V+LVGG TR+P VQ+ +++FF GKE  K++NPDE           +L+G+
Sbjct:  241 YLIDEFKKEQGIDLHNDKLALQRVREAAEKAKVELSSAQQTDVNLPYITADATGPKHLNIKVTRAKFESLVSDLVMRSLEPCKKALEDAGLSKSDITEVLLVGGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD 387          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_FRATF (Chaperone protein dnaK OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.827e-20
Identity = 55/148 (37.16%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + + EFK +   D+  +  AL+R+R A E+AK  LSS  QT + +  +             +TRA+FE L  DL  + +EP +K L DA + KS + +V+LVGG TR+P VQ+ +++FF GKE  K++NPDE           +L+G+
Sbjct:  241 YLIDEFKKEQGIDLHNDKLALQRVREAAEKAKVELSSAQQTDVNLPYITADATGPKHLNIKVTRAKFESLVSDLVMRSLEPCKKALEDAGLSKSDITEVLLVGGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD 387          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_FRAT1 (Chaperone protein dnaK OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.827e-20
Identity = 55/148 (37.16%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + + EFK +   D+  +  AL+R+R A E+AK  LSS  QT + +  +             +TRA+FE L  DL  + +EP +K L DA + KS + +V+LVGG TR+P VQ+ +++FF GKE  K++NPDE           +L+G+
Sbjct:  241 YLIDEFKKEQGIDLHNDKLALQRVREAAEKAKVELSSAQQTDVNLPYITADATGPKHLNIKVTRAKFESLVSDLVMRSLEPCKKALEDAGLSKSDITEVLLVGGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD 387          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_FRAP2 (Chaperone protein dnaK OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.827e-20
Identity = 55/148 (37.16%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + + EFK +   D+  +  AL+R+R A E+AK  LSS  QT + +  +             +TRA+FE L  DL  + +EP +K L DA + KS + +V+LVGG TR+P VQ+ +++FF GKE  K++NPDE           +L+G+
Sbjct:  241 YLIDEFKKEQGIDLHNDKLALQRVREAAEKAKVELSSAQQTDVNLPYITADATGPKHLNIKVTRAKFESLVSDLVMRSLEPCKKALEDAGLSKSDITEVLLVGGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD 387          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_FRAAA (Chaperone protein dnaK OS=Frankia alni (strain ACN14a) GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.827e-20
Identity = 55/148 (37.16%), Postives = 84/148 (56.76%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIE---IDSLYEG-IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            H ++ F  ++  D+  +  AL+RLR A E+AK  LS ++QT+I    I +  EG +    ++TRA F+ +  DL  +C  P ++ ++DA +  S +  VVLVGGSTR+P V  L++D   GKE  K +NPDE           +L GE
Sbjct:  211 HLIKTFNGQHGVDLGKDKMALQRLREAAEKAKIELSQSSQTSINLPYITASAEGPLHLDVSLTRAEFQRMTSDLIDRCKHPFQQAVKDAGIKVSDIDHVVLVGGSTRMPAVVDLVRDLTGGKEPNKGVNPDEVVAVGASLQAGVLKGE 358          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_BDEBA (Chaperone protein dnaK OS=Bdellovibrio bacteriovorus GN=dnaK PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.827e-20
Identity = 55/146 (37.67%), Postives = 86/146 (58.90%), Query Frame = 1
Query:    7 VQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSL---YEGIDFYST-ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + EFK     D+  +  AL+RL+ A E+AK  LSS  +T I +  +     G     T ++RA+F+++  DL ++ MEP  K L D+ +  S + +VVLVGGSTRIP +Q+ ++DFF GKE  +++NPDE           +L+G+
Sbjct:  233 ITEFKKDQAIDLKNDKMALQRLKEAAEKAKIELSSAQETEINLPFITADQSGPKHLQTRLSRAKFDQMTEDLVKRSMEPCRKALADSGLKASEIDEVVLVGGSTRIPAIQKAVKDFF-GKEPNRSVNPDEVVAIGAAVQGGVLAGD 377          
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_HELP23.827e-2038.19Chaperone protein dnaK OS=Helicobacter pylori (str... [more]
DNAK_FRATT3.827e-2037.16Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATO3.827e-2037.16Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATN3.827e-2037.16Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATH3.827e-2037.16Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATF3.827e-2037.16Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRAT13.827e-2037.16Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRAP23.827e-2037.16Chaperone protein dnaK OS=Francisella philomiragia... [more]
DNAK_FRAAA3.827e-2037.16Chaperone protein dnaK OS=Frankia alni (strain ACN... [more]
DNAK_BDEBA3.827e-2037.67Chaperone protein dnaK OS=Bdellovibrio bacteriovor... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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