FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HYOU1_XENTR (Hypoxia up-regulated protein 1 (Fragment) OS=Xenopus tropicalis GN=hyou1 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 1
Query:   19 KSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDE 384
            + K+KKD+  N RA+ +L     R K  LS+      +I+ L + IDF + +TR   E+L  DLF +   PV+  L  A+M    +  V+LVGG+TR+PKVQ+LL      +EL KNIN DE
Sbjct:  280 QKKSKKDVRENQRAMSKLLKEANRVKTILSANNDHMAQIEGLMDDIDFKAKVTRQELEDLCADLFNRVSAPVQHALSSAEMKMEEIDQVILVGGATRVPKVQELLLKVVGKEELGKNINADE 401          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRZT (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H V EFK +N  D+S +  A++RL+ A E+AK+ LS    T I +  +  G    +    T+TRA+F++L  DL  +   PV + L DA +  S + +V+LVGGSTRIP V + ++    GKE  K++NPDE           +++G+  + V
Sbjct:  209 HLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVK-AETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV 360          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRZP (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain P1031) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H V EFK +N  D+S +  A++RL+ A E+AK+ LS    T I +  +  G    +    T+TRA+F++L  DL  +   PV + L DA +  S + +V+LVGGSTRIP V + ++    GKE  K++NPDE           +++G+  + V
Sbjct:  209 HLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVK-AETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV 360          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRZJ (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain JJA) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H V EFK +N  D+S +  A++RL+ A E+AK+ LS    T I +  +  G    +    T+TRA+F++L  DL  +   PV + L DA +  S + +V+LVGGSTRIP V + ++    GKE  K++NPDE           +++G+  + V
Sbjct:  209 HLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVK-AETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV 360          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRU0 (Chaperone protein dnaK OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/153 (35.95%), Postives = 88/153 (57.52%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            + V+EFK +N  D+S +  AL+RL+ A E+AK+ LS   QT I +  +  G    +    ++TRA+F++L  DL  +   PV + L DA +  S + +V+LVGGSTRIP V + ++    GKE  K++NPDE           +++G+  + V
Sbjct:  209 YLVEEFKKENGIDLSQDKMALQRLKDAAEKAKKDLSGVTQTQISLPFITAGAAGPLHLEVSLTRAKFDDLTRDLVERTKVPVRRALSDAGLSLSEIDEVILVGGSTRIPAVVEAVK-AETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV 360          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRR6 (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H V EFK +N  D+S +  A++RL+ A E+AK+ LS    T I +  +  G    +    T+TRA+F++L  DL  +   PV + L DA +  S + +V+LVGGSTRIP V + ++    GKE  K++NPDE           +++G+  + V
Sbjct:  209 HLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVK-AETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV 360          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRPS (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain CGSP14) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H V EFK +N  D+S +  A++RL+ A E+AK+ LS    T I +  +  G    +    T+TRA+F++L  DL  +   PV + L DA +  S + +V+LVGGSTRIP V + ++    GKE  K++NPDE           +++G+  + V
Sbjct:  209 HLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVK-AETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV 360          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRPN (Chaperone protein dnaK OS=Streptococcus pneumoniae GN=dnaK PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H V EFK +N  D+S +  A++RL+ A E+AK+ LS    T I +  +  G    +    T+TRA+F++L  DL  +   PV + L DA +  S + +V+LVGGSTRIP V + ++    GKE  K++NPDE           +++G+  + V
Sbjct:  209 HLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVK-AETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV 360          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRPJ (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H V EFK +N  D+S +  A++RL+ A E+AK+ LS    T I +  +  G    +    T+TRA+F++L  DL  +   PV + L DA +  S + +V+LVGGSTRIP V + ++    GKE  K++NPDE           +++G+  + V
Sbjct:  209 HLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVK-AETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV 360          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRPI (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H V EFK +N  D+S +  A++RL+ A E+AK+ LS    T I +  +  G    +    T+TRA+F++L  DL  +   PV + L DA +  S + +V+LVGGSTRIP V + ++    GKE  K++NPDE           +++G+  + V
Sbjct:  209 HLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVK-AETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV 360          
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HYOU1_XENTR6.527e-2040.98Hypoxia up-regulated protein 1 (Fragment) OS=Xenop... [more]
DNAK_STRZT6.527e-2035.95Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRZP6.527e-2035.95Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRZJ6.527e-2035.95Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRU06.527e-2035.95Chaperone protein dnaK OS=Streptococcus uberis (st... [more]
DNAK_STRR66.527e-2035.95Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRPS6.527e-2035.95Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRPN6.527e-2035.95Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRPJ6.527e-2035.95Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRPI6.527e-2035.95Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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