FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRP7 (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain 70585) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H V EFK +N  D+S +  A++RL+ A E+AK+ LS    T I +  +  G    +    T+TRA+F++L  DL  +   PV + L DA +  S + +V+LVGGSTRIP V + ++    GKE  K++NPDE           +++G+  + V
Sbjct:  209 HLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVK-AETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV 360          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRP4 (Chaperone protein dnaK OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H V EFK +N  D+S +  A++RL+ A E+AK+ LS    T I +  +  G    +    T+TRA+F++L  DL  +   PV + L DA +  S + +V+LVGGSTRIP V + ++    GKE  K++NPDE           +++G+  + V
Sbjct:  209 HLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVK-AETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV 360          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRP2 (Chaperone protein dnaK OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H V EFK +N  D+S +  A++RL+ A E+AK+ LS    T I +  +  G    +    T+TRA+F++L  DL  +   PV + L DA +  S + +V+LVGGSTRIP V + ++    GKE  K++NPDE           +++G+  + V
Sbjct:  209 HLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVK-AETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV 360          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRM5 (Chaperone protein dnaK OS=Stenotrophomonas maltophilia (strain R551-3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 57/148 (38.51%), Postives = 81/148 (54.73%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + V+EF      D+  +P AL+RL+ A ERAK  LSS  QT + +  +             +TRA+ E L  +L RK +EP    L DA +  S + +V+LVGG TR+PKVQQ + +FF GKE  K++NPDE           +L G+
Sbjct:  241 YLVEEFNKDQGIDLRKDPLALQRLKDAAERAKIELSSAQQTEVNLPYVTADASGPKHLNIKLTRAKLESLVEELIRKSIEPCRVALNDAGLRSSDISEVILVGGQTRMPKVQQAVTEFF-GKEPRKDVNPDEAVALGAAIQGGVLGGD 387          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_SHESW (Chaperone protein dnaK OS=Shewanella sp. (strain W3-18-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 56/148 (37.84%), Postives = 84/148 (56.76%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            +   EFK +   D+  +P A++RL+ A E+AK  LSST  T + +  +             ITRA+ E L  DL  + +EP++  L DA +  S V++V+LVGG TR+PKVQ+ + +FF GKE  K++NPDE           +LSG+
Sbjct:  238 YLADEFKKEQGLDLRKDPLAMQRLKEAAEKAKIELSSTNHTEVNLPYITADATGPKHLVIKITRAKLESLVEDLILRTLEPLKVALADADLSVSDVNEVILVGGQTRMPKVQEAVTNFF-GKEPRKDVNPDEAVAVGAAIQAGVLSGD 384          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_SHEPC (Chaperone protein dnaK OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 56/148 (37.84%), Postives = 84/148 (56.76%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            +   EFK +   D+  +P A++RL+ A E+AK  LSST  T + +  +             ITRA+ E L  DL  + +EP++  L DA +  S V++V+LVGG TR+PKVQ+ + +FF GKE  K++NPDE           +LSG+
Sbjct:  238 YLADEFKKEQGLDLRKDPLAMQRLKEAAEKAKIELSSTNHTEVNLPYITADATGPKHLVIKITRAKLESLVEDLILRTLEPLKVALADADLSVSDVNEVILVGGQTRMPKVQEAVTNFF-GKEPRKDVNPDEAVAVGAAIQAGVLSGD 384          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_PSEMY (Chaperone protein dnaK OS=Pseudomonas mendocina (strain ymp) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 54/148 (36.49%), Postives = 86/148 (58.11%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + V EFK +   ++ G+P A++RL+ A E+AK  LSS+ QT + +  +             I+R++ E L  DL ++ +EP    L+DA +D S + DV+LVGG TR+P VQ+ + +FF GKE  K++NPDE           +L+G+
Sbjct:  239 YLVDEFKKETGMNLKGDPLAMQRLKEAAEKAKIELSSSQQTDVNLPYITADATGPKHLNVKISRSKLESLVEDLVQRTIEPCRTALKDAGIDVSKIDDVILVGGQTRMPLVQKTVAEFF-GKEPRKDVNPDEAVAMGAAIQGAVLAGD 385          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_PECCP (Chaperone protein dnaK OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/148 (37.16%), Postives = 84/148 (56.76%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + V EFK +   D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  +L  + +EP++  L+DA +  S + DV+LVGG TR+P VQ+ + DFF GKE  K++NPDE           +LSG+
Sbjct:  239 YLVDEFKKEQGFDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHLNIKVTRAKLESLVEELVNRSLEPLKVALQDAGLSVSEIQDVILVGGQTRMPLVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLSGD 385          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_METFK (Chaperone protein dnaK OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 1
Query:   13 EFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            EFK +N  D+  +  A +RL+ A E+AK  LSS+ QT + +  +             ITRA+FE L  DL  + ++P E  L+DA +  S + DV+LVGG TR+PKVQ+ +++FF GKE  K++NPDE           +L G+
Sbjct:  243 EFKKENGIDLRNDLLAKQRLKEAAEKAKIELSSSTQTEVNLPYITADASGPKHLVVKITRAKFESLVEDLIERSIKPCEVALKDAGVKVSDIQDVILVGGQTRMPKVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLQGD 385          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_IDILO (Chaperone protein dnaK OS=Idiomarina loihiensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/150 (36.67%), Postives = 86/150 (57.33%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID------FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + V++F+     D+  +P A++RL+ A E+AK  LSS  QT  E++  Y   D          +TRA+ E L  DL +K +EP+++ L DA +  S + D+++VGG TR+PKVQ  + DFF GKE  +++NPDE           +L G+
Sbjct:  239 YLVEQFQKDQGMDLRKDPLAMQRLKEAAEKAKIELSSAQQT--EVNLPYITADNAGPKHMAIKVTRAKLESLVEDLIKKSLEPLKQALADADLSVSDIQDIIMVGGQTRMPKVQAAVTDFF-GKEPRRDVNPDEAVAVGAAVQAGVLQGD 385          
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_STRP76.527e-2035.95Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRP46.527e-2035.95Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRP26.527e-2035.95Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRM56.527e-2038.51Chaperone protein dnaK OS=Stenotrophomonas maltoph... [more]
DNAK_SHESW6.527e-2037.84Chaperone protein dnaK OS=Shewanella sp. (strain W... [more]
DNAK_SHEPC6.527e-2037.84Chaperone protein dnaK OS=Shewanella putrefaciens ... [more]
DNAK_PSEMY6.527e-2036.49Chaperone protein dnaK OS=Pseudomonas mendocina (s... [more]
DNAK_PECCP6.527e-2037.16Chaperone protein dnaK OS=Pectobacterium carotovor... [more]
DNAK_METFK6.527e-2038.89Chaperone protein dnaK OS=Methylobacillus flagella... [more]
DNAK_IDILO6.527e-2036.67Chaperone protein dnaK OS=Idiomarina loihiensis GN... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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