FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig451 contig Ccv1_Contig451:38..493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_GEOKA (Chaperone protein dnaK OS=Geobacillus kaustophilus GN=dnaK PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 56/153 (36.60%), Postives = 87/153 (56.86%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            + V +FK ++  D+S +  AL+RL+ A E+AK+ LS   QT I +  +       +    T+TRA+FEEL+  L  + M PV + L+DA +  + +  V+LVGGSTRIP VQ+ ++    GKE  K +NPDE           +++GE  + V
Sbjct:  208 YLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGEVKDVV 359          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_FRATM (Chaperone protein dnaK OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/148 (37.16%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + + EFK +   D+  +  AL+R+R A E+AK  LSS  QT + +  +             +TRA+FE L  DL  + +EP +K L DA + KS + +V+LVGG TR+P VQ+ +++FF GKE  K++NPDE           +L+G+
Sbjct:  241 YLIDEFKKEQGIDLHNDKLALQRVREAAEKAKVELSSAQQTDVNLPYITADATGPKHLNIKVTRAKFESLVSDLVMRSLEPCKKALEDAGLSKSDITEVLLVGGQTRMPLVQEKVKEFF-GKEPRKDMNPDEAVAVGAAIQGGVLAGD 387          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_FLAPJ (Chaperone protein dnaK OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 53/144 (36.81%), Postives = 86/144 (59.72%), Query Frame = 1
Query:   13 EFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            EFK++   D+  +P +L+R++ A E+AK  LSS+A+T I +  +             +TRA+FE+L+  L ++ MEPV K L+DA +    + +V+LVGGSTR+P++   ++ FF GK+  K +NPDE           +LSG+
Sbjct:  237 EFKAEEGIDLRLDPMSLQRIKEAAEKAKIELSSSAETEINLPYVTATASGPKHLVKKLTRAKFEQLSDTLVKRSMEPVAKALKDAGLTVKDIDEVILVGGSTRMPRIADEVEKFF-GKKASKGVNPDEVVAIGAAIQGGVLSGD 379          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_ERWCT (Chaperone protein dnaK OS=Erwinia carotovora subsp. atroseptica GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/148 (37.16%), Postives = 84/148 (56.76%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + V EFK +   D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  +L  + +EP++  L+DA +  S + DV+LVGG TR+P VQ+ + DFF GKE  K++NPDE           +LSG+
Sbjct:  239 YLVDEFKKEQGFDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHLNIKVTRAKLESLVEELVNRSLEPLKVALQDAGLSVSEIQDVILVGGQTRMPLVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLSGD 385          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_EDWI9 (Chaperone protein dnaK OS=Edwardsiella ictaluri (strain 93-146) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/148 (37.16%), Postives = 84/148 (56.76%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + V EFK +   D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  +L  + MEP++  L+DA +  S + DV+LVGG TR+P VQ+ + DFF GKE  K++NPDE           +L+G+
Sbjct:  239 YLVDEFKKEQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEELVARSMEPLKVALKDAGLSVSDIDDVILVGGQTRMPMVQKQVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLAGD 385          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_BARQU (Chaperone protein dnaK OS=Bartonella quintana GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/148 (37.16%), Postives = 84/148 (56.76%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            +F  EFK +   D+  +  AL+RL+ A E+AK  LSS+ QT I +  +             +TRA+FE L  DL ++ +EP +  L+DA +    + +VVLVGG TR+PK+Q+++Q FF GK+  K +NPDE           +L G+
Sbjct:  234 YFADEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFITADQSGPKHLTMKLTRAKFESLVDDLVQRTIEPCKAALKDAGLKAGEIDEVVLVGGMTRMPKIQEVVQSFF-GKDPHKGVNPDEVVAMGAAIQGGVLQGD 380          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_BACHD (Chaperone protein dnaK OS=Bacillus halodurans GN=dnaK PE=2 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 55/153 (35.95%), Postives = 85/153 (55.56%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            H + EFK +N  D+S +  A++RL+ A E+AK+ LS    T I +  +            T+TRA+FEEL+  L  + + P  + L+D+ +  S +  VVLVGGSTRIP VQ+ +++   GKE  K +NPDE           +L+G+  + V
Sbjct:  208 HLIAEFKKENGIDLSQDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITADATGPKHLELTLTRAKFEELSSHLVERTLGPTRQALQDSGLSASEIDKVVLVGGSTRIPAVQEAIKN-LTGKEPHKGVNPDEVVALGAAVQAGVLTGDVKDVV 359          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_AZOC5 (Chaperone protein dnaK OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 56/148 (37.84%), Postives = 81/148 (54.73%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            +   EFK +   D+  +  AL+RL+ A E+AK  LSS  QT I +  +             +TRA+FE L  DL ++ MEP    L+DA +    + +VVLVGG TR+PKVQ++++ FF GKE  K +NPDE           +L G+
Sbjct:  234 YLADEFKKEQGIDLRNDKLALQRLKEAAEKAKIELSSATQTEINLPFITADASGPKHLTMKLTRAKFEALVEDLIQRTMEPCRLALKDAGLSAGQIDEVVLVGGMTRMPKVQEMVKQFF-GKEPHKGVNPDEVVAIGAAIQAGVLQGD 380          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_AQUPY (Chaperone protein dnaK (Fragment) OS=Aquifex pyrophilus GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.527e-20
Identity = 58/153 (37.91%), Postives = 89/153 (58.17%), Query Frame = 1
Query:    7 VQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY------EGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            ++EFK ++  D+  +  AL+RL+ A E+AK+ LS   +T I +  +       + +     +TRAR EE+  DL  + ++ V++ L DA +  S + +VVLVGGSTRIP VQQ +++FF GKE  K +NPDE           +L+GE  E V
Sbjct:  240 IEEFKKEHGIDLRQDRTALQRLKEAAEQAKKELSFKMETEINLPFITIDPNTNQPLHLQKKLTRARLEEMINDLIDRTIDIVKQALEDANVKPSDIDEVVLVGGSTRIPLVQQKIKEFF-GKEPHKGLNPDEVVAMGAAIQAGVLAGEVKEIV 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_THET8 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaK PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20
Identity = 55/152 (36.18%), Postives = 89/152 (58.55%), Query Frame = 1
Query:   10 QEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY------EGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            +EFK ++  D+  + +AL+RL  A E+AK  LSST +TTI +  +         +     +TRA+FEEL   L ++   PVE+ L+DA +  + + +V+LVGG+TR+P VQQ++++   GKE  +++NPDE           +L GE  + V
Sbjct:  234 EEFKKEHGVDLKADRQALQRLIEAAEKAKIELSSTLETTISLPFIALDPASKTPLHLEKKLTRAKFEELIQPLLKRLRGPVEQALKDAGLTPAQIDEVILVGGATRVPAVQQVVRELL-GKEPNRSVNPDEVVAMGAAIQAGVLMGEVRDVV 384          
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_GEOKA6.527e-2036.60Chaperone protein dnaK OS=Geobacillus kaustophilus... [more]
DNAK_FRATM6.527e-2037.16Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FLAPJ6.527e-2036.81Chaperone protein dnaK OS=Flavobacterium psychroph... [more]
DNAK_ERWCT6.527e-2037.16Chaperone protein dnaK OS=Erwinia carotovora subsp... [more]
DNAK_EDWI96.527e-2037.16Chaperone protein dnaK OS=Edwardsiella ictaluri (s... [more]
DNAK_BARQU6.527e-2037.16Chaperone protein dnaK OS=Bartonella quintana GN=d... [more]
DNAK_BACHD6.527e-2035.95Chaperone protein dnaK OS=Bacillus halodurans GN=d... [more]
DNAK_AZOC56.527e-2037.84Chaperone protein dnaK OS=Azorhizobium caulinodans... [more]
DNAK_AQUPY6.527e-2037.91Chaperone protein dnaK (Fragment) OS=Aquifex pyrop... [more]
DNAK_THET88.525e-2036.18Chaperone protein dnaK OS=Thermus thermophilus (st... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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