FC868996

Overview
NameFC868996
Unique NameFC868996
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC868996_ssr59 microsatellite FC868996_ssr59:59..68. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig9439 contig Ccv1_Contig9439:1..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MPK4_ARATH (Mitogen-activated protein kinase 4 OS=Arabidopsis thaliana GN=MPK4 PE=1 SV=2)

HSP 1 Score: 314.694 bits (805), Expect = 3.088e-85
Identity = 146/201 (72.64%), Postives = 171/201 (85.07%), Query Frame = 1
Query:  103 GQTADFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYRA 705
            G  +    V THGG ++QYN++GNLFE++ KY PP+ PIGRGAYGIVC+  N+ET E VA+KKI NAFDN +DAKRTLREIKLL+H DHENVIAVKD++ PP R  F DVYI  ELMDTDL+QIIRSNQ L+++HC++FLYQLLRGLKY+HSANV+HRDLKPSNLLLNANCDLK+ DFGLAR  SE +FMTEYVVTRWYRA
Sbjct:   11 GDQSSSKGVATHGGSYVQYNVYGNLFEVSRKYVPPLRPIGRGAYGIVCAATNSETGEEVAIKKIGNAFDNIIDAKRTLREIKLLKHMDHENVIAVKDIIKPPQRENFNDVYIVYELMDTDLHQIIRSNQPLTDDHCRFFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKLGDFGLARTKSETDFMTEYVVTRWYRA 211          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MMK2_MEDSA (Mitogen-activated protein kinase homolog MMK2 OS=Medicago sativa GN=MMK2 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.173e-84
Identity = 142/193 (73.58%), Postives = 171/193 (88.60%), Query Frame = 1
Query:  127 VPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYRA 705
            VPTHGG+++QYNI+GNLFE++ KY PPI  +GRGAYGIVC+ +N ET E VA+KKI NAFDN +DAKRTLREIKLL+H DHENV+++KD++ PP +  F  VYI +ELMDTDL+QIIRSNQ ++++HC+YF+YQLLRGLKY+HSANV+HRDLKPSNLLLNANCDLKI DFGLAR TSE +FMTEYVVTRWYRA
Sbjct:   13 VPTHGGRYLQYNIYGNLFEVSRKYVPPIRSVGRGAYGIVCAAVNAETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENVMSIKDIIRPPQKENFNHVYIVSELMDTDLHQIIRSNQPMTDDHCRYFVYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRA 205          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MPK5_ARATH (Mitogen-activated protein kinase 5 OS=Arabidopsis thaliana GN=MPK5 PE=2 SV=2)

HSP 1 Score: 310.071 bits (793), Expect = 7.606e-84
Identity = 142/209 (67.94%), Postives = 176/209 (84.21%), Query Frame = 1
Query:   79 DVAQVNGVGQTADFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYRA 705
            ++     +G T +   V  HGG++ QYN++GNLFE++ KY PPI PIGRGAYG VC+ +++ET+E +A+KKI  AFDN +DAKRTLREIKLL+H +HENV+ +KD++ PP + +F DVYI  ELMDTDL+QIIRSNQSL+++HCQYFLYQ+LRGLKYIHSANV+HRDLKPSNLLLN+NCDLKI DFGLAR TSE E+MTEYVVTRWYRA
Sbjct:    4 EIESATDLGDT-NIKGVLVHGGRYFQYNVYGNLFEVSNKYVPPIRPIGRGAYGFVCAAVDSETHEEIAIKKIGKAFDNKVDAKRTLREIKLLRHLEHENVVVIKDIIRPPKKEDFVDVYIVFELMDTDLHQIIRSNQSLNDDHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNSNCDLKITDFGLARTTSETEYMTEYVVTRWYRA 211          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MPK2_ORYSJ (Mitogen-activated protein kinase 2 OS=Oryza sativa subsp. japonica GN=MPK2 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 7.119e-82
Identity = 136/201 (67.66%), Postives = 170/201 (84.58%), Query Frame = 1
Query:  103 GQTADFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYRA 705
            G  A      THGG+++QYN++GNLFE+++KY PPI P+GRGA GI+C+V+N +T + VA+KKI NAFDN +DAKRTLREIKLL+H DH+NVI++KD++ PP R  F DVYI  ELMDTDL+ ++RSNQ L+++HCQYFLYQ+LRGLKY+HSANV+HRDL+PSNLLLNA CDLKI DFGLAR T+E +FM EYVVTRWYRA
Sbjct:   29 GGEAQIKGTLTHGGRYVQYNVYGNLFEVSSKYVPPIRPVGRGACGIICAVVNAQTRQEVAIKKIGNAFDNQIDAKRTLREIKLLRHMDHDNVISIKDIIRPPRRENFNDVYIVYELMDTDLHHLLRSNQPLTDDHCQYFLYQVLRGLKYVHSANVLHRDLRPSNLLLNAKCDLKIGDFGLARTTNETDFMMEYVVTRWYRA 229          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MPK13_ARATH (Mitogen-activated protein kinase 13 OS=Arabidopsis thaliana GN=MPK13 PE=1 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.705e-81
Identity = 138/191 (72.25%), Postives = 165/191 (86.39%), Query Frame = 1
Query:  133 THGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYRA 705
            T+ G+++ YN+ GN+FE+++KY PPI PIGRGAYGIVC   N+ETNE VA+KKIANAFDN +DAKRTLREIKLL H DH+NVI +KD++  P +  F DVYI  ELMDTDL+QIIRS Q+L+++HCQYFLYQ+LRGLKYIHSANV+HRDLKPSNL+LN NCDLKICDFGLAR ++E E MTEYVVTRWYRA
Sbjct:   11 TYDGRYVMYNVLGNIFELSSKYIPPIEPIGRGAYGIVCCATNSETNEEVAIKKIANAFDNRVDAKRTLREIKLLSHMDHDNVIKIKDIIELPEKERFEDVYIVYELMDTDLHQIIRSTQTLTDDHCQYFLYQILRGLKYIHSANVLHRDLKPSNLVLNTNCDLKICDFGLARTSNETEIMTEYVVTRWYRA 201          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MPK10_ARATH (Mitogen-activated protein kinase 10 OS=Arabidopsis thaliana GN=MPK10 PE=1 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.800e-78
Identity = 133/199 (66.83%), Postives = 166/199 (83.42%), Query Frame = 1
Query:  109 TADFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYRA 705
            T D P   +H G++IQYN+FG++FE+ AKY+PPI PIGRGA GIVCS +++ETNE VA+KKI   FDN ++AKRTLREIKLL+HFDHEN++A++DV+ PP R  F DVYI  ELM+ DLY+ ++S+Q L+++H  YF+YQ+LRGLKYIHSANV+HRDLKPSNLLL+  CDLKICDFGLAR T E+  MTEYVVTRWYRA
Sbjct:   30 TIDIPGTLSHDGRYIQYNLFGHIFELPAKYKPPIRPIGRGACGIVCSAVDSETNEKVAIKKITQVFDNTIEAKRTLREIKLLRHFDHENIVAIRDVILPPQRDSFEDVYIVNELMEFDLYRTLKSDQELTKDHGMYFMYQILRGLKYIHSANVLHRDLKPSNLLLSTQCDLKICDFGLARATPESNLMTEYVVTRWYRA 228          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MPK11_ARATH (Mitogen-activated protein kinase 11 OS=Arabidopsis thaliana GN=MPK11 PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 6.896e-77
Identity = 135/193 (69.95%), Postives = 163/193 (84.46%), Query Frame = 1
Query:  127 VPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYRA 705
            V  +GG+++QYN++GNLFE++ KY PP+ PIGRGA GIVC+  N+ET E VA+KKI NAF N +DAKRTLREIKLL+H DH+NVIA+ D++ PP    F DV+I  ELMDTDL+ IIRSNQ L+++H ++FLYQLLRGLKY+HSANV+HRDLKPSNLLLNANCDLKI DFGLAR  SE +FMTEYVVTRWYRA
Sbjct:   16 VSINGGRYVQYNVYGNLFEVSKKYVPPLRPIGRGASGIVCAAWNSETGEEVAIKKIGNAFGNIIDAKRTLREIKLLKHMDHDNVIAIIDIIRPPQPDNFNDVHIVYELMDTDLHHIIRSNQPLTDDHSRFFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTKSETDFMTEYVVTRWYRA 208          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MPK12_ARATH (Mitogen-activated protein kinase 12 OS=Arabidopsis thaliana GN=MPK12 PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.176e-76
Identity = 132/193 (68.39%), Postives = 164/193 (84.97%), Query Frame = 1
Query:  127 VPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYRA 705
            VPTHGG+++QYN++G LFE++ KY PPI PIGRGA GIVC+ +N+ T E VA+KKI NAFDN +DAKRTLREIKLL+H DHENVI +KD+V PP R  F DVYI  ELMDTDL +I+RSNQ+L+ + C++ +YQLLRGLKY+HSAN++HRDL+PSN+LLN+  +LKI DFGLAR TS+ +FMTEYVVTRWYRA
Sbjct:   17 VPTHGGRYVQYNVYGQLFEVSRKYVPPIRPIGRGACGIVCAAVNSVTGEKVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENVITIKDIVRPPQRDIFNDVYIVYELMDTDLQRILRSNQTLTSDQCRFLVYQLLRGLKYVHSANILHRDLRPSNVLLNSKNELKIGDFGLARTTSDTDFMTEYVVTRWYRA 209          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MAPK_PETHY (Mitogen-activated protein kinase homolog 1 OS=Petunia hybrida GN=MEK1 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 3.916e-72
Identity = 132/184 (71.74%), Postives = 159/184 (86.41%), Query Frame = 1
Query:  157 YNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTS-ENEFMTEYVVTRWYRA 705
            Y+++ +LFEI  KY  PI PIGRGAYGIVCS +N ETNE VA+KKI NAF+N +DA RTLRE+KLL+H  HENVIA+KDV+ P  RR F DVY+  ELMDTDL+QII+S+Q+LS +HCQYFL+QLLRGLKY+HSAN++HRDLKP NLL+NANCDLKICDFGLAR +S +++FMTEYVVTRWYRA
Sbjct:   19 YSMWQSLFEIDTKY-VPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRIDALRTLRELKLLRHLRHENVIALKDVMMPIQRRSFKDVYLVYELMDTDLHQIIKSSQTLSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTSSGKDQFMTEYVVTRWYRA 201          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: NTF3_TOBAC (Mitogen-activated protein kinase homolog NTF3 OS=Nicotiana tabacum GN=NTF3 PE=1 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.114e-72
Identity = 132/184 (71.74%), Postives = 159/184 (86.41%), Query Frame = 1
Query:  157 YNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTS-ENEFMTEYVVTRWYRA 705
            Y+++ +LFEI  KY  PI PIGRGAYGIVCS +N ETNE VA+KKI NAF+N +DA RTLRE+KLL+H  HENVIA+KDV+ P  RR F DVY+  ELMDTDL+QII+S+Q+LS +HCQYFL+QLLRGLKY+HSAN++HRDLKP NLL+NANCDLKICDFGLAR +S +++FMTEYVVTRWYRA
Sbjct:   19 YSMWQSLFEIDTKY-VPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRIDALRTLRELKLLRHLRHENVIALKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQTLSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTSSGKDQFMTEYVVTRWYRA 201          
The following BLAST results are available for this feature:
BLAST of FC868996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MPK4_ARATH3.088e-8572.64Mitogen-activated protein kinase 4 OS=Arabidopsis ... [more]
MMK2_MEDSA1.173e-8473.58Mitogen-activated protein kinase homolog MMK2 OS=M... [more]
MPK5_ARATH7.606e-8467.94Mitogen-activated protein kinase 5 OS=Arabidopsis ... [more]
MPK2_ORYSJ7.119e-8267.66Mitogen-activated protein kinase 2 OS=Oryza sativa... [more]
MPK13_ARATH2.705e-8172.25Mitogen-activated protein kinase 13 OS=Arabidopsis... [more]
MPK10_ARATH2.800e-7866.83Mitogen-activated protein kinase 10 OS=Arabidopsis... [more]
MPK11_ARATH6.896e-7769.95Mitogen-activated protein kinase 11 OS=Arabidopsis... [more]
MPK12_ARATH1.176e-7668.39Mitogen-activated protein kinase 12 OS=Arabidopsis... [more]
MAPK_PETHY3.916e-7271.74Mitogen-activated protein kinase homolog 1 OS=Petu... [more]
NTF3_TOBAC5.114e-7271.74Mitogen-activated protein kinase homolog NTF3 OS=N... [more]

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Properties
Property NameValue
Genbank descriptionC31007D07EF AbioticL1 Citrus clementina cDNA clone C31007D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868996 ID=FC868996; Name=FC868996; organism=Citrus clementina; type=EST; length=705bp
GAGACTCGATAAAAACACAACCTCCAACGAGAGCGTAGAAAATTAATTAG
AGAGAAAAAGAGAGAGAGTAAAATGGCTGACGTGGCGCAGGTCAACGGCG
TAGGTCAAACGGCTGATTTTCCTGCGGTACCGACGCACGGCGGTCAGTTT
ATACAGTACAATATATTTGGAAACTTGTTTGAAATCACGGCCAAGTATCG
GCCTCCGATCATGCCGATTGGTCGCGGCGCGTACGGGATCGTTTGCTCGG
TGTTGAATACGGAGACGAATGAGCTCGTTGCGATGAAGAAAATAGCGAAC
GCTTTTGATAATCACATGGATGCCAAGCGAACGCTTCGTGAGATTAAGCT
TCTGCAACATTTCGATCATGAAAATGTGATAGCTGTAAAAGATGTGGTTC
CCCCACCGTTACGAAGAGAATTCACTGATGTCTATATTGCTGCGGAACTC
ATGGACACTGACCTTTACCAAATTATTCGCTCAAATCAAAGTTTATCCGA
GGAGCACTGCCAGTATTTCTTGTATCAACTTCTTCGAGGACTCAAGTATA
TCCATTCAGCAAATGTTATTCATCGGGATTTGAAGCCCAGCAATCTCTTG
TTAAATGCAAATTGTGATTTAAAAATTTGTGATTTTGGTCTTGCTCGTCC
AACCTCGGAGAATGAGTTCATGACAGAGTATGTTGTCACNAGATGGTACC
GAGCC
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