FC868996

Overview
NameFC868996
Unique NameFC868996
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC868996_ssr59 microsatellite FC868996_ssr59:59..68. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig9439 contig Ccv1_Contig9439:1..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MK07_HUMAN (Mitogen-activated protein kinase 7 OS=Homo sapiens GN=MAPK7 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.184e-52
Identity = 107/186 (57.53%), Postives = 135/186 (72.58%), Query Frame = 1
Query:  166 FGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRR-EFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLAR-----PTSENEFMTEYVVTRWYRA 705
            F   F++  +Y   I  IG GAYG+V S     T + VA+KKI NAFD   +AKRTLRE+K+L+HF H+N+IA+KD++ P +   EF  VY+  +LM++DL+QII S+Q L+ EH +YFLYQLLRGLKY+HSA VIHRDLKPSNLL+N NC+LKI DFG+AR     P     FMTEYV TRWYRA
Sbjct:   45 FDVTFDVGDEYEI-IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 229          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MK07_BOVIN (Mitogen-activated protein kinase 7 OS=Bos taurus GN=MAPK7 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.184e-52
Identity = 107/186 (57.53%), Postives = 135/186 (72.58%), Query Frame = 1
Query:  166 FGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRR-EFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLAR-----PTSENEFMTEYVVTRWYRA 705
            F   F++  +Y   I  IG GAYG+V S     T + VA+KKI NAFD   +AKRTLRE+K+L+HF H+N+IA+KD++ P +   EF  VY+  +LM++DL+QII S+Q L+ EH +YFLYQLLRGLKY+HSA VIHRDLKPSNLL+N NC+LKI DFG+AR     P     FMTEYV TRWYRA
Sbjct:   45 FDVTFDVGDEYEI-IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 229          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MPK15_ORYSJ (Mitogen-activated protein kinase 15 OS=Oryza sativa subsp. japonica GN=MPK15 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.547e-52
Identity = 98/167 (58.68%), Postives = 127/167 (76.05%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLAR----PTSENEFMTEYVVTRWYRA 705
            IG+G+YG+VCS L+T T E VA+KKI + F++  DA R LREIKLL+   H +++ +K ++ PP RREF D+Y+  ELM++DL+Q+I++N  L+ EH Q+FLYQLLRGLKYIH+ANV HRDLKP N+L NA+C LKICDFGLAR     T    F T+YV TRWYRA
Sbjct:   19 IGKGSYGVVCSALDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFSDTPTAIFWTDYVATRWYRA 185          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MPK8_ORYSJ (Mitogen-activated protein kinase 8 OS=Oryza sativa subsp. japonica GN=MPK8 PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.020e-52
Identity = 96/167 (57.49%), Postives = 126/167 (75.45%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLAR----PTSENEFMTEYVVTRWYRA 705
            IG+G+YG+VCS ++  T + VA+KKI N F++  DA R LREIKLL+   H +++ +K ++ PP RR+F D+Y+  ELMDTDL+Q+I++N  L++EH Q+FLYQ+LR LKYIH+ANV HRDLKP N+L NANC LKICDFGLAR     T    F T+YV TRWYRA
Sbjct:   19 IGKGSYGVVCSAIDQHTGDKVAIKKIHNIFEHLSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMDTDLHQVIKANDDLTKEHHQFFLYQMLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRA 185          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MPK7_ORYSJ (Mitogen-activated protein kinase 7 OS=Oryza sativa subsp. japonica GN=MPK7 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.639e-52
Identity = 95/167 (56.89%), Postives = 126/167 (75.45%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLAR----PTSENEFMTEYVVTRWYRA 705
            +G+G+YG+VCS ++  T + VA+KKI N F++  DA R LREIKLL+   H +++ +K ++ PP RR+F D+Y+  ELMDTDL+Q+I++N  L++EH Q+FLYQ+LR LKYIH+ANV HRDLKP N+L NANC LKICDFGLAR     T    F T+YV TRWYRA
Sbjct:   19 VGKGSYGVVCSAIDQHTGDKVAIKKIHNIFEHLSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMDTDLHQVIKANDDLTKEHHQFFLYQMLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRA 185          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MPK20_ARATH (Mitogen-activated protein kinase 20 OS=Arabidopsis thaliana GN=MPK20 PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 4.501e-52
Identity = 97/167 (58.08%), Postives = 126/167 (75.45%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLAR----PTSENEFMTEYVVTRWYRA 705
            IG+G+YG+VCS ++T T E VA+KKI + F++  DA R LREIKLL+   H +++ +K ++ PP RREF D+Y+  ELM++DL+Q+I++N  L+ EH Q+FLYQLLR LKYIH+ANV HRDLKP N+L NANC LKICDFGLAR     T    F T+YV TRWYRA
Sbjct:   31 IGKGSYGVVCSAIDTLTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MPK14_ORYSJ (Mitogen-activated protein kinase 14 OS=Oryza sativa subsp. japonica GN=MPK14 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.501e-52
Identity = 96/167 (57.49%), Postives = 127/167 (76.05%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLAR----PTSENEFMTEYVVTRWYRA 705
            IG+G+YG+VCS L+T T + VA+KKI + F++  DA R LREIKLL+   H +++ +K ++ PP RREF D+Y+  ELM++DL+Q+I++N  L+ EH Q+FLYQLLRGLKYIH+ANV HRDLKP N+L NA+C LKICDFGLAR     T    F T+Y+ TRWYRA
Sbjct:   19 IGKGSYGVVCSALDTHTGDKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFSDTPTAIFWTDYIATRWYRA 185          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MPK16_ARATH (Mitogen-activated protein kinase 16 OS=Arabidopsis thaliana GN=MPK16 PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 5.878e-52
Identity = 97/167 (58.08%), Postives = 126/167 (75.45%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLAR----PTSENEFMTEYVVTRWYRA 705
            IG+G+YG+VCS  +T T E VA+KKI + F++  DA R LREIKLL+   H +++ +K ++ PP RREF D+Y+  ELM++DL+Q+I++N  L+ EH Q+FLYQLLRGLKYIH+ANV HRDLKP N+L NA+C LKICDFGLAR     T    F T+YV TRWYRA
Sbjct:   31 IGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MAPK2_PNECA (Mitogen-activated protein kinase 2 OS=Pneumocystis carinii GN=MKP2 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.003e-51
Identity = 98/167 (58.68%), Postives = 131/167 (78.44%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENE----FMTEYVVTRWYRA 705
            IG GAYGIVCS ++  + + VA+KKI+  FD+ M   RTLRE+KLL++F+HEN+I++ D+  P     F++VY+  ELM+TD++++IR+ Q LS++HCQYF+YQ+LR LK +HSA+++HRDLKPSNLLLNANCDLK+CDFGLAR     E    FMTEYV TRWYRA
Sbjct:   22 IGEGAYGIVCSAIHKPSGQKVAIKKIS-PFDHSMFCLRTLREMKLLRYFNHENIISILDIQQPQDFESFSEVYLIQELMETDMHRVIRT-QDLSDDHCQYFIYQILRALKAMHSADILHRDLKPSNLLLNANCDLKVCDFGLARSAVSTEDSSSFMTEYVATRWYRA 186          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MAPK_FUSSO (Mitogen-activated protein kinase OS=Fusarium solani subsp. pisi GN=MAPK PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.310e-51
Identity = 98/167 (58.68%), Postives = 128/167 (76.65%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENE----FMTEYVVTRWYRA 705
            +G GAYG+VCS ++  + + VA+KKI   FD+ M   RTLRE+KLL++F+HEN+I++ D+  P     F +VY+  ELM+TD+++ IR+ Q LS++HCQYF+YQ LR LK +HSANV+HRDLKPSNLLLNANCDLK+CDFGLAR  +  E    FMTEYV TRWYRA
Sbjct:   29 VGEGAYGVVCSAIHKPSGQKVAIKKIT-PFDHSMFCLRTLREMKLLRYFNHENIISILDIQKPRNYESFNEVYLIQELMETDMHRAIRT-QDLSDDHCQYFIYQTLRALKAMHSANVLHRDLKPSNLLLNANCDLKVCDFGLARSAASQEDNSGFMTEYVATRWYRA 193          
The following BLAST results are available for this feature:
BLAST of FC868996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK07_HUMAN1.184e-5257.53Mitogen-activated protein kinase 7 OS=Homo sapiens... [more]
MK07_BOVIN1.184e-5257.53Mitogen-activated protein kinase 7 OS=Bos taurus G... [more]
MPK15_ORYSJ1.547e-5258.68Mitogen-activated protein kinase 15 OS=Oryza sativ... [more]
MPK8_ORYSJ2.020e-5257.49Mitogen-activated protein kinase 8 OS=Oryza sativa... [more]
MPK7_ORYSJ2.639e-5256.89Mitogen-activated protein kinase 7 OS=Oryza sativa... [more]
MPK20_ARATH4.501e-5258.08Mitogen-activated protein kinase 20 OS=Arabidopsis... [more]
MPK14_ORYSJ4.501e-5257.49Mitogen-activated protein kinase 14 OS=Oryza sativ... [more]
MPK16_ARATH5.878e-5258.08Mitogen-activated protein kinase 16 OS=Arabidopsis... [more]
MAPK2_PNECA1.003e-5158.68Mitogen-activated protein kinase 2 OS=Pneumocystis... [more]
MAPK_FUSSO1.310e-5158.68Mitogen-activated protein kinase OS=Fusarium solan... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31007D07EF AbioticL1 Citrus clementina cDNA clone C31007D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868996 ID=FC868996; Name=FC868996; organism=Citrus clementina; type=EST; length=705bp
GAGACTCGATAAAAACACAACCTCCAACGAGAGCGTAGAAAATTAATTAG
AGAGAAAAAGAGAGAGAGTAAAATGGCTGACGTGGCGCAGGTCAACGGCG
TAGGTCAAACGGCTGATTTTCCTGCGGTACCGACGCACGGCGGTCAGTTT
ATACAGTACAATATATTTGGAAACTTGTTTGAAATCACGGCCAAGTATCG
GCCTCCGATCATGCCGATTGGTCGCGGCGCGTACGGGATCGTTTGCTCGG
TGTTGAATACGGAGACGAATGAGCTCGTTGCGATGAAGAAAATAGCGAAC
GCTTTTGATAATCACATGGATGCCAAGCGAACGCTTCGTGAGATTAAGCT
TCTGCAACATTTCGATCATGAAAATGTGATAGCTGTAAAAGATGTGGTTC
CCCCACCGTTACGAAGAGAATTCACTGATGTCTATATTGCTGCGGAACTC
ATGGACACTGACCTTTACCAAATTATTCGCTCAAATCAAAGTTTATCCGA
GGAGCACTGCCAGTATTTCTTGTATCAACTTCTTCGAGGACTCAAGTATA
TCCATTCAGCAAATGTTATTCATCGGGATTTGAAGCCCAGCAATCTCTTG
TTAAATGCAAATTGTGATTTAAAAATTTGTGATTTTGGTCTTGCTCGTCC
AACCTCGGAGAATGAGTTCATGACAGAGTATGTTGTCACNAGATGGTACC
GAGCC
back to top