FC868996

Overview
NameFC868996
Unique NameFC868996
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: CDK8_DICDI (Probable cyclin-dependent kinase 8 OS=Dictyostelium discoideum GN=cdk8 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 62/179 (34.64%), Postives = 95/179 (53.07%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTET-NELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQS----LSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLL---NANC-DLKICDFGLAR-------PTSENEFMTEYVVTRWYRA 705
            IG G YG+V    + +  N  VA+KK  +  +    +    REI LL+   +EN++ + DV   P  +    +Y+  +  + DL+ II+ ++      S+   +  ++Q+L G+ Y+HS  VIHRDLKPSN+L+      C  +KI DFGLAR       P +EN      VVT WYR+
Sbjct:   50 IGSGTYGMVYKADDKKRPNNKVAVKKFRSTKEGEGLSLTAYREIGLLKELSNENIVKLLDVCLNPKDKL---LYLIFDYAEFDLFGIIKYHRENGSHFSDATIKSLIWQVLNGIHYLHSNWVIHRDLKPSNILVMGEGKECGTVKIGDFGLARIFQSPLKPLNEN----GVVVTIWYRS 221          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: NUAK2_MOUSE (NUAK family SNF1-like kinase 2 OS=Mus musculus GN=Nuak2 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 50/160 (31.25%), Postives = 82/160 (51.25%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIA-NAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTD----VYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEY 681
            +G+G YG V     + +  LVA+K I  +   +  D     REI+++   +H ++IA+ +V    L   F +    V +       DLY  I     LSE   ++F  Q++  L Y H   ++HRDLK  N+LL+AN ++KI DFGL+    + +F+  +
Sbjct:   63 LGKGTYGKVKKARES-SGRLVAIKSIRKDKIKDEQDLLHIRREIEIMSSLNHPHIIAIHEVGRSRLVTVFENSSKIVIVMEYASRGDLYDYISERPRLSERDARHFFRQIVSALHYCHQNGIVHRDLKLENILLDANGNIKIADFGLSNLYHKGKFLQTF 221          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: CIPK8_ARATH (CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 56/149 (37.58%), Postives = 79/149 (53.02%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTL-----REIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAE-LMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLA 645
            IG G +  V    NTET E VAMK +    D     KR +     REI +++   H  V+ + +V+        T +YI  E +   +L+  I  N  LSE   + + +QL+ G+ Y HS  V HRDLKP NLLL++  +LKI DFGL+
Sbjct:   15 IGEGTFAKVKFAQNTETGESVAMKIV----DRSTIIKRKMVDQIKREISIMKLVRHPCVVRLYEVLASR-----TKIYIILEYITGGELFDKIVRNGRLSESEARKYFHQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNLKISDFGLS 154          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: SIK1_MOUSE (Serine/threonine-protein kinase SIK1 OS=Mus musculus GN=Sik1 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 51/178 (28.65%), Postives = 94/178 (52.81%), Query Frame = 1
Query:  112 ADFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDV-YIAAELMDT-DLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFG 639
            ++F AVP+  GQ  Q  +    +++          +G+G + +V    +  T   VA+K I     +  + ++  RE++L++  +H N+I +  V+      E  D+ YI  E     +++  + SN  LSE   +   +Q+L  ++Y H+ +++HRDLK  NLLL++N D+K+ DFG
Sbjct:    5 SEFSAVPSGTGQGQQKPLRVGFYDVERT-------LGKGNFAVVKLARHRVTKTQVAIKIIDKTRLDSSNLEKIYREVQLMKLLNHPNIIKLYQVM------ETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARQKFWQILSAVEYCHNHHIVHRDLKTENLLLDSNMDIKLADFG 169          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: M2K5_ARATH (Mitogen-activated protein kinase kinase 5 OS=Arabidopsis thaliana GN=MKK5 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 51/146 (34.93%), Postives = 78/146 (53.42%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRT--LREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLAR 648
            IG GA G V  V++T T+   A+K I   + NH D  R    REI++L+  DH NV+   D+          ++ +  E MD      +       E+       Q+L GL Y+H  +++HRD+KPSNLL+N+  ++KI DFG++R
Sbjct:   76 IGSGAGGTVYKVIHTPTSRPFALKVI---YGNHEDTVRRQICREIEILRSVDHPNVVKCHDMFD-----HNGEIQVLLEFMDQGS---LEGAHIWQEQELADLSRQILSGLAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSR 210          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: CIPKV_ORYSJ (CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 52/150 (34.67%), Postives = 81/150 (54.00%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKI-ANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDT-DLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSE 660
            IG G +  V    NTE +E VA+K +       H   ++  REI  ++   H NV+ + +V+    R     ++I  E +   +L++II +N  L EE  + +  QL+  + Y HS  V HRDLK  NLLL+A+ +LK+ DFGL+  T +
Sbjct:   26 IGEGTFAKVRFAKNTENDEPVAIKILDKEKVQKHRLVEQIRREICTMKLVKHPNVVRLFEVMGSKAR-----IFIVLEYVTGGELFEIIATNGRLKEEEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKVSDFGLSALTEQ 170          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: WIN1_SCHPO (MAP kinase kinase kinase win1 OS=Schizosaccharomyces pombe GN=win1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 48/146 (32.88%), Postives = 82/146 (56.16%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIA--NAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLAR 648
            IG G++G V   +N +T +L+A+K++A      +    KR   E+ +L+ FDH NV++   +    + RE  ++++      + L++ +R  +   E   Q ++ QLL GL YIHS  V H+D+KP N+L + N  +K  DFG A+
Sbjct: 1126 IGSGSFGTVYRAVNLDTGDLMAVKEVALHKPRISRPMIKRIKGEMLVLELFDHPNVVSYYGI---EVHREKVNIFMEL-CQGSSLFEFLRYGRIEDELVIQVYVLQLLEGLAYIHSCGVSHQDVKPENILFDHNGIMKFTDFGSAK 1267          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: SNF1_CANGA (Carbon catabolite-derepressing protein kinase OS=Candida glabrata GN=SNF1 PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 45/156 (28.85%), Postives = 81/156 (51.92%), Query Frame = 1
Query:  208 IMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAK-RTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFM 672
            +  +G G++G V    +  T + VA+K I        D + R  REI  L+   H ++I + DV+     +   ++ +  E    +L+  I     +SE+  + F  Q++  ++Y H   ++HRDLKP NLLL+ + ++KI DFGL+   ++  F+
Sbjct:   42 VKTLGEGSFGKVKLAYHVTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI-----KSKDEIIMVIEYAGNELFDYIVQRNKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 192          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MP2K3_MOUSE (Dual specificity mitogen-activated protein kinase kinase 3 OS=Mus musculus GN=Map2k3 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 55/162 (33.95%), Postives = 91/162 (56.17%), Query Frame = 1
Query:  178 FEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKL-LQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDL----YQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSA-NVIHRDLKPSNLLLNANCDLKICDFGLA 645
            FE+ A     I  +GRGAYG+V  V + ++  ++A+K+I  A  N  + KR L ++ + ++  D    +         L RE  DV+I  ELMDT L     +++  N  + E+        ++R L+++HS  +VIHRD+KPSN+L+N    +K+CDFG++
Sbjct:   57 FEVEADDLVTISELGRGAYGVVEKVRHAQSGTIMAVKRI-RATVNTQEQKRLLMDLDINMRTVDCFYTVTFYGA----LFRE-GDVWICMELMDTSLDKFYRKVLEKNMKIPEDILGEIAVSIVRALEHLHSKLSVIHRDVKPSNVLINKEGHVKMCDFGIS 212          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: MP2K3_HUMAN (Dual specificity mitogen-activated protein kinase kinase 3 OS=Homo sapiens GN=MAP2K3 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 56/162 (34.57%), Postives = 91/162 (56.17%), Query Frame = 1
Query:  178 FEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKL-LQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRS----NQSLSEEHCQYFLYQLLRGLKYIHSA-NVIHRDLKPSNLLLNANCDLKICDFGLA 645
            FE+ A     I  +GRGAYG+V  V + ++  ++A+K+I  A  N  + KR L ++ + ++  D    +         L RE  DV+I  ELMDT L +  R     N ++ E+        ++R L+++HS  +VIHRD+KPSN+L+N    +K+CDFG++
Sbjct:   57 FEVEADDLVTISELGRGAYGVVEKVRHAQSGTIMAVKRI-RATVNSQEQKRLLMDLDINMRTVDCFYTVTFYGA----LFRE-GDVWICMELMDTSLDKFYRKVLDKNMTIPEDILGEIAVSIVRALEHLHSKLSVIHRDVKPSNVLINKEGHVKMCDFGIS 212          
The following BLAST results are available for this feature:
BLAST of FC868996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK8_DICDI3.369e-1534.64Probable cyclin-dependent kinase 8 OS=Dictyosteliu... [more]
NUAK2_MOUSE4.400e-1531.25NUAK family SNF1-like kinase 2 OS=Mus musculus GN=... [more]
CIPK8_ARATH4.400e-1537.58CBL-interacting serine/threonine-protein kinase 8 ... [more]
SIK1_MOUSE5.747e-1528.65Serine/threonine-protein kinase SIK1 OS=Mus muscul... [more]
M2K5_ARATH5.747e-1534.93Mitogen-activated protein kinase kinase 5 OS=Arabi... [more]
CIPKV_ORYSJ5.747e-1534.67CBL-interacting protein kinase 31 OS=Oryza sativa ... [more]
WIN1_SCHPO7.505e-1532.88MAP kinase kinase kinase win1 OS=Schizosaccharomyc... [more]
SNF1_CANGA7.505e-1528.85Carbon catabolite-derepressing protein kinase OS=C... [more]
MP2K3_MOUSE7.505e-1533.95Dual specificity mitogen-activated protein kinase ... [more]
MP2K3_HUMAN7.505e-1534.57Dual specificity mitogen-activated protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC31007D07EF AbioticL1 Citrus clementina cDNA clone C31007D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868996 ID=FC868996; Name=FC868996; organism=Citrus clementina; type=EST; length=705bp
GAGACTCGATAAAAACACAACCTCCAACGAGAGCGTAGAAAATTAATTAG
AGAGAAAAAGAGAGAGAGTAAAATGGCTGACGTGGCGCAGGTCAACGGCG
TAGGTCAAACGGCTGATTTTCCTGCGGTACCGACGCACGGCGGTCAGTTT
ATACAGTACAATATATTTGGAAACTTGTTTGAAATCACGGCCAAGTATCG
GCCTCCGATCATGCCGATTGGTCGCGGCGCGTACGGGATCGTTTGCTCGG
TGTTGAATACGGAGACGAATGAGCTCGTTGCGATGAAGAAAATAGCGAAC
GCTTTTGATAATCACATGGATGCCAAGCGAACGCTTCGTGAGATTAAGCT
TCTGCAACATTTCGATCATGAAAATGTGATAGCTGTAAAAGATGTGGTTC
CCCCACCGTTACGAAGAGAATTCACTGATGTCTATATTGCTGCGGAACTC
ATGGACACTGACCTTTACCAAATTATTCGCTCAAATCAAAGTTTATCCGA
GGAGCACTGCCAGTATTTCTTGTATCAACTTCTTCGAGGACTCAAGTATA
TCCATTCAGCAAATGTTATTCATCGGGATTTGAAGCCCAGCAATCTCTTG
TTAAATGCAAATTGTGATTTAAAAATTTGTGATTTTGGTCTTGCTCGTCC
AACCTCGGAGAATGAGTTCATGACAGAGTATGTTGTCACNAGATGGTACC
GAGCC
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