FC868996

Overview
NameFC868996
Unique NameFC868996
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: ULK1_MOUSE (Serine/threonine-protein kinase ULK1 OS=Mus musculus GN=Ulk1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 52/161 (32.30%), Postives = 84/161 (52.17%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTL--REIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDT-DLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLN---------ANCDLKICDFGLARPTSEN 663
            IG GA+ +V    + E ++L    K  N    ++   +TL  +EIK+L+   HEN++A+ D      +     VY+  E  +  DL   + + ++LSE+  + FL Q+   ++ +HS  +IHRDLKP N+LL+         +N  +KI DFG AR    N
Sbjct:   22 IGHGAFAVVFKGRHREKHDLEVAVKCINK--KNLAKSQTLLGKEIKILKELKHENIVALYD-----FQEMANSVYLVMEYCNGGDLADYLHTMRTLSEDTVRLFLQQIAGAMRLLHSKGIIHRDLKPQNILLSNPGGRRANPSNIRVKIADFGFARYLQSN 175          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: PRP4_SCHPO (Serine/threonine-protein kinase prp4 OS=Schizosaccharomyces pombe GN=prp4 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 54/170 (31.76%), Postives = 89/170 (52.35%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREF---TDVYIAAELMDTDLYQIIRS---NQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCD-LKICDFGLARPTSENEFMTEYVVTRWYRA 705
            +G+G +  V S L+   N+  A+K I N   N +  K  L+E+ +L+     +    + ++     R F     + +  E++  +L  I++    N  LS +  + + YQ+   L  +   NVIH D+KP N+L+N   + LKICD G A   SENE +T Y+V+R+YRA
Sbjct:  165 LGKGMFSTVVSALDRNRNQTFAIKIIRN---NEVMYKEGLKEVSILERLQAADREGKQHIIH--YERHFMHKNHLCMVFEMLSLNLRDILKKFGRNVGLSIKAVRLYAYQMFMALDLLKQCNVIHSDIKPDNMLVNEKRNILKICDLGSASDASENE-ITPYLVSRFYRA 328          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: PPK9_SCHPO (Protein kinase domain-containing protein ppk9 OS=Schizosaccharomyces pombe GN=ppk9 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 53/164 (32.32%), Postives = 83/164 (50.61%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDA-KRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYRA 705
            +G+G    V    + +TNE VA+K + N      D  KR  RE+ +L+   H N+I +  V   P   ++T   +A E MDTDL+ ++  +  L E   +    Q++  + Y H   V HRDLK  N+LLN +  +K+ DFGL+    +  F++    T  Y A
Sbjct:   29 LGQGNLAKVKLGKHFQTNEKVALKMVYNDELEDKDTWKRLQREVTILRQLHHPNIITLYQVFRVP---KYT--VLALEYMDTDLHSMVVKHNRLDECTTRKIFRQIVHAIDYCHLHRVAHRDLKLENILLNKDLVVKLTDFGLSNFMLDGSFLSTSCGTPHYAA 187          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: IPL1_KLULA (Spindle assembly checkpoint kinase OS=Kluyveromyces lactis GN=IPL1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 45/143 (31.47%), Postives = 78/143 (54.55%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANA-FDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDT-DLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFG 639
            +G+G +G V  V + ET  + A+K +       +   K+  RE+++   F H+N+  +        R     VY+  E +   +LY+ +++N  L+E    YF+YQ+   L Y+HS N++HRD+KP N+L+  N  +K+ DFG
Sbjct:  106 LGKGKFGKVYCVKHRETGLICALKAMEKKEIVQYTIQKQFRREVEIQGSFKHKNLTQLYGFFYDEKR-----VYLLMEYVYYGELYKFLKNNGPLNETLASYFVYQMANALDYMHSKNILHRDIKPENILIGFNNTIKLTDFG 243          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 53/146 (36.30%), Postives = 75/146 (51.37%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKI--ANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDT-DLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLA 645
            +G G +  V    N E  + VA+K I       N M A+   REI  ++   H NVI + +V+        T +Y   E +   +L+  I SN  L E+  + +  QL+  + Y HS  V HRDLKP NLLL+AN  LK+ DFGL+
Sbjct:   37 LGEGTFAKVKFARNVENGDNVAIKVIDKEKVLKNKMIAQ-IKREISTMKLIKHPNVIRMFEVMASK-----TKIYFVLEFVTGGELFDKISSNGRLKEDEARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDANGALKVSDFGLS 176          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: KCC1_YEAST (Calcium/calmodulin-dependent protein kinase I OS=Saccharomyces cerevisiae GN=CMK1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 51/156 (32.69%), Postives = 77/156 (49.36%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAF--DNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDT-DLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCD---LKICDFGLARPTSENE 666
            +G G +G+V    NTET E VA+K +       N +  +    E+ +LQ   H N++A KD      +      YI  +L    +L+  I      +EE     L ++L  +KY+HS N++HRDLKP NLL     D   L + DFG+A+    +E
Sbjct:   43 LGAGTFGVVRQAKNTETGEDVAVKILIKKALKGNKVQLEALYDELDILQRLHHPNIVAFKDWFESKDK-----FYIITQLAKGGELFDRILKKGKFTEEDAVRILVEILSAVKYMHSQNIVHRDLKPENLLYIDKSDESPLVVADFGIAKRLKSDE 193          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: CSK2A_CAEEL (Casein kinase II subunit alpha OS=Caenorhabditis elegans GN=kin-3 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 51/167 (30.54%), Postives = 91/167 (54.49%), Query Frame = 1
Query:  208 IMPIGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLREIKLLQHF-DHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNA-NCDLKICDFGLARPTSENEFMTEYVVTRWYR 702
            +  +GRG Y  V       T+E V +K +       +  K+  REIK+L++     N+I + DVV  P+ R  T   I   + ++D  Q+    Q+LS+   +Y+LY+LL+ L + HS  ++HRD+KP N++++A   +L++ D+GLA      +     V +R+++
Sbjct:   41 VRKLGRGKYSEVFEGFKMSTDEKVVVKIL-----KPVKKKKIKREIKILENLRGGTNIITLLDVVKDPISR--TPALIFEHVNNSDFKQLY---QTLSDYDIRYYLYELLKALDFCHSQGIMHRDVKPHNVMIDAEKRELRLIDWGLAEFYHPRQDYNVRVASRYFK 197          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: CIPK9_ARATH (CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 48/145 (33.10%), Postives = 76/145 (52.41%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKI-ANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDT-DLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLA 645
            +G G++  V    NT T +  A+K +       H   ++  REI  ++   H NV+ + +V+        T +YI  EL++  +L+  I     L E+  + +  QL+  + Y HS  V HRDLKP NL+L+AN  LK+ DFGL+
Sbjct:   25 LGEGSFAKVKYAKNTVTGDQAAIKILDREKVFRHKMVEQLKREISTMKLIKHPNVVEIIEVMASK-----TKIYIVLELVNGGELFDKIAQQGRLKEDEARRYFQQLINAVDYCHSRGVYHRDLKPENLILDANGVLKVSDFGLS 164          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: CIPK8_ORYSJ (CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica GN=CIPK8 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 50/145 (34.48%), Postives = 80/145 (55.17%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKI-ANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDT-DLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLA 645
            IG G +  V    NTE+ E VAMK +  ++   H  A +  REI +++   H NV+ + +V+    +     ++I  E +   +L+  I  +  L+E   + +  QL+ G+ + HS  V HRDLKP NLLL++  +LKI DFGL+
Sbjct:   19 IGEGTFAKVKFAQNTESGESVAMKVVDRSSILKHKMADQIKREISIMKLVRHPNVVRLHEVLASRKK-----IFIILEFITGGELFDKIIRHGRLNEADARRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNLKISDFGLS 158          
BLAST of FC868996 vs. ExPASy Swiss-Prot
Match: AAPK1_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 50/154 (32.47%), Postives = 82/154 (53.25%), Query Frame = 1
Query:  217 IGRGAYGIVCSVLNTETNELVAMKKIANAFDNHMDAKRTLR-EIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDT-DLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFM 672
            +G G +G V    +  T   VA+K +       +D    +R EI+ L+ F H ++I +  V+  P     +D+++  E +   +L+  I  N  L E+  +    Q+L G+ Y H   V+HRDLKP N+LL+A+ + KI DFGL+   S+ EF+
Sbjct:   33 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP-----SDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 181          
The following BLAST results are available for this feature:
BLAST of FC868996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ULK1_MOUSE2.852e-1432.30Serine/threonine-protein kinase ULK1 OS=Mus muscul... [more]
PRP4_SCHPO2.852e-1431.76Serine/threonine-protein kinase prp4 OS=Schizosacc... [more]
PPK9_SCHPO2.852e-1432.32Protein kinase domain-containing protein ppk9 OS=S... [more]
IPL1_KLULA2.852e-1431.47Spindle assembly checkpoint kinase OS=Kluyveromyce... [more]
CIPKN_ARATH2.852e-1436.30CBL-interacting serine/threonine-protein kinase 23... [more]
KCC1_YEAST3.725e-1432.69Calcium/calmodulin-dependent protein kinase I OS=S... [more]
CSK2A_CAEEL3.725e-1430.54Casein kinase II subunit alpha OS=Caenorhabditis e... [more]
CIPK9_ARATH3.725e-1433.10CBL-interacting serine/threonine-protein kinase 9 ... [more]
CIPK8_ORYSJ3.725e-1434.48CBL-interacting protein kinase 8 OS=Oryza sativa s... [more]
AAPK1_RAT3.725e-1432.475'-AMP-activated protein kinase catalytic subunit ... [more]

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Properties
Property NameValue
Genbank descriptionC31007D07EF AbioticL1 Citrus clementina cDNA clone C31007D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868996 ID=FC868996; Name=FC868996; organism=Citrus clementina; type=EST; length=705bp
GAGACTCGATAAAAACACAACCTCCAACGAGAGCGTAGAAAATTAATTAG
AGAGAAAAAGAGAGAGAGTAAAATGGCTGACGTGGCGCAGGTCAACGGCG
TAGGTCAAACGGCTGATTTTCCTGCGGTACCGACGCACGGCGGTCAGTTT
ATACAGTACAATATATTTGGAAACTTGTTTGAAATCACGGCCAAGTATCG
GCCTCCGATCATGCCGATTGGTCGCGGCGCGTACGGGATCGTTTGCTCGG
TGTTGAATACGGAGACGAATGAGCTCGTTGCGATGAAGAAAATAGCGAAC
GCTTTTGATAATCACATGGATGCCAAGCGAACGCTTCGTGAGATTAAGCT
TCTGCAACATTTCGATCATGAAAATGTGATAGCTGTAAAAGATGTGGTTC
CCCCACCGTTACGAAGAGAATTCACTGATGTCTATATTGCTGCGGAACTC
ATGGACACTGACCTTTACCAAATTATTCGCTCAAATCAAAGTTTATCCGA
GGAGCACTGCCAGTATTTCTTGTATCAACTTCTTCGAGGACTCAAGTATA
TCCATTCAGCAAATGTTATTCATCGGGATTTGAAGCCCAGCAATCTCTTG
TTAAATGCAAATTGTGATTTAAAAATTTGTGATTTTGGTCTTGCTCGTCC
AACCTCGGAGAATGAGTTCATGACAGAGTATGTTGTCACNAGATGGTACC
GAGCC
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