FC868997

Overview
NameFC868997
Unique NameFC868997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length460
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868997 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 3.078e-41
Identity = 84/113 (74.34%), Postives = 99/113 (87.61%), Query Frame = 2
Query:  122 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 460
            TETFAFQAEINQL+SLIINTFYSNKEIFLRELISNSSDA DKIR++SLT+++ L  +  L I ++PDK N +L++ D+GIGMTKA+LVNNLGTIARSGTK FMEAL AG D+S
Sbjct:    2 TETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQAVLGDESHLRIRVVPDKANKTLTVEDTGIGMTKAELVNNLGTIARSGTKAFMEALEAGGDMS 114          
BLAST of FC868997 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 4.020e-41
Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 2
Query:  116 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 460
            ++ ET  F AEI+QL+SLIINT YSNKEIFLRELISN+SDALDKIR+++L+D S+L+++PELFI IIP K    L I DSGIGMTKADLVNNLGTIA+SGTK FMEAL+AGADVS
Sbjct:    4 AKVETHEFTAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPSQLESEPELFIRIIPQKDQKVLEIRDSGIGMTKADLVNNLGTIAKSGTKSFMEALSAGADVS 118          
BLAST of FC868997 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 1.528e-40
Identity = 85/116 (73.28%), Postives = 100/116 (86.21%), Query Frame = 2
Query:  116 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAG-ADVS 460
            S+ E F FQAEINQL+SLIINTFYSNKE+FLRELISN+SDALDKIR++SLTD S L+++ EL I IIPDKT  +L++IDSGIGMTK D+V NLGTIARSGTK FME L +G AD+S
Sbjct:    4 SQVERFTFQAEINQLMSLIINTFYSNKEVFLRELISNASDALDKIRYQSLTDASVLESKTELEIKIIPDKTAKTLTLIDSGIGMTKTDMVKNLGTIARSGTKNFMEQLQSGAADIS 119          
BLAST of FC868997 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.293e-39
Identity = 82/113 (72.57%), Postives = 96/113 (84.96%), Query Frame = 2
Query:  122 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 460
            +ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D  +L+ +P+LFI I P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:    3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 115          
BLAST of FC868997 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.881e-39
Identity = 82/115 (71.30%), Postives = 95/115 (82.61%), Query Frame = 2
Query:  116 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 460
            S  ET+ FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D   L++ PELFI + P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:    2 SSQETYEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPKVLESDPELFIRLTPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 116          
BLAST of FC868997 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 160.614 bits (405), Expect = 2.881e-39
Identity = 81/112 (72.32%), Postives = 95/112 (84.82%), Query Frame = 2
Query:  125 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 460
            ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR+++L+D  +L+ +P+LFI I P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:    4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPKQLETEPDLFIRITPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 115          
BLAST of FC868997 vs. ExPASy Swiss-Prot
Match: HSP83_DROPB (Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 6.418e-39
Identity = 84/117 (71.79%), Postives = 94/117 (80.34%), Query Frame = 2
Query:  110 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 460
            M  E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ S TD  KL          IP+KT  +L+IID+GI MTK+DLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:    1 MPEEAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYXSXTDPXKLXXXXXXXXXXIPNKTAGTLTIIDTGIXMTKSDLVNNLGTIAKSGTKAFMEALQAGADIS 117          
BLAST of FC868997 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 8.382e-39
Identity = 81/122 (66.39%), Postives = 102/122 (83.61%), Query Frame = 2
Query:  110 MASETET-----FAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 460
            MAS+ ET     +AF A+I+QLLSLIIN FYSNKEIFLRELISN+SDAL+KIR+E++ D  +++ QP+ +I +  DK NN+L+I DSGIGMTKADLVNNLGTIA+SGT+ FMEAL AG+D+S
Sbjct:    1 MASKEETPDQEVYAFNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMS 122          
BLAST of FC868997 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 1.095e-38
Identity = 77/114 (67.54%), Postives = 98/114 (85.96%), Query Frame = 2
Query:  119 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 460
            + E +AF A+I+QLLSLIIN FYSNKEIFLRELISN+SDAL+KIR+E++ D  +++ QP+ +I +  DK NN+L+I DSGIGMTKADLVNNLGTIA+SGT+ FMEAL AG+D+S
Sbjct:    9 DQEVYAFNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMS 122          
BLAST of FC868997 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.581e-37
Identity = 80/109 (73.39%), Postives = 94/109 (86.24%), Query Frame = 2
Query:  119 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 445
            E ETFAFQAEI QL+SLIINTFYSN+EIFL+ELISN+SDALDKIR+ESLTD SKLD+  EL I IIP+    +L+++D+GIGMTKADL+NNL TIA+SGTK  MEAL A
Sbjct:   11 EVETFAFQAEIAQLISLIINTFYSNEEIFLQELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLALVDTGIGMTKADLINNLRTIAKSGTKACMEALQA 119          
The following BLAST results are available for this feature:
BLAST of FC868997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HSP85_TRYCR3.078e-4174.34Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP90_CANAL4.020e-4173.91Heat shock protein 90 homolog OS=Candida albicans ... [more]
HSC90_DICDI1.528e-4073.28Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP82_YEAST1.293e-3972.57ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSP82_ASHGO2.881e-3971.30Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HSC82_YEAST2.881e-3972.32ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP83_DROPB6.418e-3971.79Heat shock protein 83 (Fragment) OS=Drosophila pse... [more]
HSP90_THEAN8.382e-3966.39Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP90_THEPA1.095e-3867.54Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
H90B3_HUMAN1.581e-3773.39Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionC31007D08EF AbioticL1 Citrus clementina cDNA clone C31007D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868997 ID=FC868997; Name=FC868997; organism=Citrus clementina; type=EST; length=460bp
GAACTCTCTGCGTTTTTTCTCTCTCTCTCTCTGTCTCTCGTTCGCTTCCA
AAAACCCTTGTTTATAACTCAGAAGAGATCGTTTTTTGGTTGAACGGCAG
GTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGGCTGAGAT
CAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGA
TCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATC
AGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCT
TTTCATTCACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTG
ACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACA
ATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGC
GGATGTGAGC
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