FC868998

Overview
NameFC868998
Unique NameFC868998
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length460
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868998 vs. ExPASy Swiss-Prot
Match: HTPG_COXBR (Chaperone protein htpG OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 7.360e-27
Identity = 58/113 (51.33%), Postives = 86/113 (76.11%), Query Frame = 2
Query:  104 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 442
            +S+  + ET +F+AE+ QLL L+ ++ YSNKEIFLRELISNSSDA DK+R+++L+D +  +   +L I I  DK N +++I D+GIGM++ +++ NLGTIA+SGT+ F E LA
Sbjct:    1 MSLQPQAETLSFEAEVKQLLHLVAHSLYSNKEIFLRELISNSSDAADKLRYQALSDAALYENDADLKIWIDFDKDNRTITIRDNGIGMSREEVIENLGTIAKSGTRAFRELLA 113          
BLAST of FC868998 vs. ExPASy Swiss-Prot
Match: HTPG_BURCH (Chaperone protein htpG OS=Burkholderia cenocepacia (strain HI2424) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 7.360e-27
Identity = 60/106 (56.60%), Postives = 79/106 (74.53%), Query Frame = 2
Query:  125 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 442
            ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE L D +  +  P L I I  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEGLADNALYENDPNLRIRIGYDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFTKLS 109          
BLAST of FC868998 vs. ExPASy Swiss-Prot
Match: HTPG_BURCA (Chaperone protein htpG OS=Burkholderia cenocepacia (strain AU 1054) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 7.360e-27
Identity = 60/106 (56.60%), Postives = 79/106 (74.53%), Query Frame = 2
Query:  125 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 442
            ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE L D +  +  P L I I  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEGLADNALYENDPNLRIRIGYDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFTKLS 109          
BLAST of FC868998 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJR (Chaperone protein htpG OS=Campylobacter jejuni (strain RM1221) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 9.612e-27
Identity = 63/105 (60.00%), Postives = 78/105 (74.29%), Query Frame = 2
Query:  137 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 451
            FQ E+NQLL L+I++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   +LSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:    3 FQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of FC868998 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJJ (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 9.612e-27
Identity = 63/105 (60.00%), Postives = 78/105 (74.29%), Query Frame = 2
Query:  137 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 451
            FQ E+NQLL L+I++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   +LSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:    3 FQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of FC868998 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJE (Chaperone protein htpG OS=Campylobacter jejuni GN=htpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 9.612e-27
Identity = 63/105 (60.00%), Postives = 78/105 (74.29%), Query Frame = 2
Query:  137 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 451
            FQ E+NQLL L+I++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   +LSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:    3 FQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of FC868998 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJD (Chaperone protein htpG OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 9.612e-27
Identity = 63/105 (60.00%), Postives = 78/105 (74.29%), Query Frame = 2
Query:  137 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 451
            FQ E+NQLL L+I++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   +LSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:    3 FQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKNDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of FC868998 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJ8 (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 9.612e-27
Identity = 63/105 (60.00%), Postives = 78/105 (74.29%), Query Frame = 2
Query:  137 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 451
            FQ E+NQLL L+I++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   +LSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:    3 FQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of FC868998 vs. ExPASy Swiss-Prot
Match: HTPG_BURCM (Chaperone protein htpG OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 9.612e-27
Identity = 60/106 (56.60%), Postives = 79/106 (74.53%), Query Frame = 2
Query:  125 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 442
            ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE L D +  +  P L I I  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEGLADNALYENDPNLRIRIGFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFTKLS 109          
BLAST of FC868998 vs. ExPASy Swiss-Prot
Match: HTPG_WIGBR (Chaperone protein htpG OS=Wigglesworthia glossinidia brevipalpis GN=htpG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.640e-26
Identity = 59/105 (56.19%), Postives = 83/105 (79.05%), Query Frame = 2
Query:  125 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 439
            ET  FQ+E+ QLL+L+I++ YSNKEIFLRELISN+SDALDK+RF S++D+     Q +L I I  DK   S++I D+GIGM+K +++ NLGTIA+SGTK F++++
Sbjct:    5 ETLEFQSEVKQLLNLMIHSLYSNKEIFLRELISNASDALDKLRFLSISDEKIKIKQNKLCIFIDYDKNKKSITIQDNGIGMSKKEVIENLGTIAKSGTKSFIKSI 109          
The following BLAST results are available for this feature:
BLAST of FC868998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_COXBR7.360e-2751.33Chaperone protein htpG OS=Coxiella burnetii (strai... [more]
HTPG_BURCH7.360e-2756.60Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_BURCA7.360e-2756.60Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_CAMJR9.612e-2760.00Chaperone protein htpG OS=Campylobacter jejuni (st... [more]
HTPG_CAMJJ9.612e-2760.00Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJE9.612e-2760.00Chaperone protein htpG OS=Campylobacter jejuni GN=... [more]
HTPG_CAMJD9.612e-2760.00Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJ89.612e-2760.00Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_BURCM9.612e-2756.60Chaperone protein htpG OS=Burkholderia ambifaria (... [more]
HTPG_WIGBR1.640e-2656.19Chaperone protein htpG OS=Wigglesworthia glossinid... [more]

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Properties
Property NameValue
Genbank descriptionC31007D09EF AbioticL1 Citrus clementina cDNA clone C31007D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868998 ID=FC868998; Name=FC868998; organism=Citrus clementina; type=EST; length=460bp
GAACTCTCTGCGTTTTTTCTCTCTCTCTCTCTGTCTCTCGTTCGCTTCCA
AAAACCCTTGTTTATAACTCAGAAGAGATCGTTTTTTGGTTGAACGGCAG
GTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGGCTGAGAT
CAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGA
TCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATC
AGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCT
TTTCATTCACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTG
ACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACA
ATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGC
GGATGTGAGC
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