FC868999

Overview
NameFC868999
Unique NameFC868999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9440 contig Ccv1_Contig9440:1..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STRSV (6-phospho-beta-galactosidase OS=Streptococcus sanguinis (strain SK36) GN=lacG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26
Identity = 63/151 (41.72%), Postives = 90/151 (59.60%), Query Frame = 3
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            S P +F+FG A++AYQ EGA H  G+ P  WD +  D           + A +FY +Y  D+ L ++ G + +R SI+WSRI P G   G VN +GV+FY+NL  E     ++PFVTL H+DTP+AL    G FL+ + ++ F +YA  CF
Sbjct:    4 SLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNY-----WYTAEPASDFYHKYPVDLKLAEEYGVNGIRISIAWSRIFPTGY--GEVNPKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFVNYAAFCF 146          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_LACLA (6-phospho-beta-galactosidase OS=Lactococcus lactis subsp. lactis GN=lacG PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26
Identity = 62/151 (41.06%), Postives = 90/151 (59.60%), Query Frame = 3
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA H  G+ P  WD +  D           + A +FY +Y  D+ L ++ G + +R SI+WSRI P G   G VN++GV+FY+ L  E     ++PFVTL H+DTP+AL    G FL+ + ++ F DYA  CF
Sbjct:    4 TLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNY-----WYTAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTGY--GEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCF 146          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STRMU (6-phospho-beta-galactosidase OS=Streptococcus mutans GN=lacG PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 61/151 (40.40%), Postives = 90/151 (59.60%), Query Frame = 3
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA H  G+ P  WD +  D           + A +FY +Y  D+ L ++ G + +R SI+WSRI P G   G VN +G+ FY+NL  E     ++PFVTL H+DTP+AL    G FL+ + ++ F +YA+ CF
Sbjct:    4 TLPKDFIFGGATAAYQAEGATHADGKGPVAWDKYLEDNY-----WYTAEPASDFYHQYPVDLKLAEEFGVNGIRISIAWSRIFPKGY--GAVNPKGLAFYHNLFAECHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFVNYAEFCF 146          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_LACAC (6-phospho-beta-galactosidase OS=Lactobacillus acidophilus GN=lacG PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 63/151 (41.72%), Postives = 91/151 (60.26%), Query Frame = 3
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA    G+    WD F  +          GD A +FY  Y ED+ L ++ G + +R SI+WSRI P+G+  G V   GVDFY+ L  E  +  ++PFVTL H+DTP+ L ++ G FL+ + + DF +YAD CF
Sbjct:    4 TLPKDFIFGGATAAYQAEGATKTDGKGRVAWDKFLEEN-----FWYKGDPASDFYHNYVEDLELAEKFGGNVIRISIAWSRIFPNGD--GEVKPNGVDFYHKLFAECDARHVEPFVTLHHFDTPEGLHED-GDFLTHEKMDDFVEYADYCF 146          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_CLOAB (6-phospho-beta-galactosidase OS=Clostridium acetobutylicum GN=lacG PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 60/152 (39.47%), Postives = 93/152 (61.18%), Query Frame = 3
Query:  246 NSFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            N+F  +F+FG A++AYQ EGA    G+ P +WD +   +         GD A +FY +YKED+   ++ G + +R SI+WSR++P G   G VN +G+ FY++LI+E I   ++PFVTL H+DTP  L  + G +L+   +  F  +A +CF
Sbjct:    2 NNFGEDFIFGGATAAYQAEGATKEDGKGPCIWDEYLKKE-----GRFTGDTASDFYHKYKEDLKFSRKFGVNGIRISIAWSRVIPDG--KGEVNPKGLKFYSDLIDECIKNNVEPFVTLHHFDTPLTLFKD-GDWLNRNNIDYFVRFAKVCF 145          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STRA3 (6-phospho-beta-galactosidase OS=Streptococcus agalactiae serotype III GN=lacG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26
Identity = 62/151 (41.06%), Postives = 89/151 (58.94%), Query Frame = 3
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA H  G+ P  WD +  D           + A +FY +Y  D+AL ++ G + +R SI+WSRI P G   G VN +GV+FY+ L  E     ++PFVTL H+DTP+AL    G FL+   ++ F +YA  CF
Sbjct:    4 TLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNY-----WYTAEPASDFYHKYPVDLALAEEYGVNGIRISIAWSRIFPTGY--GEVNLKGVEFYHKLFEECHKRHVEPFVTLHHFDTPEALHSN-GDFLNRDNIEHFVNYAAFCF 146          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STAES (6-phospho-beta-galactosidase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=lacG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26
Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 3
Query:  255 PPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            P +F+FG A++AYQ EGA    G+    WDT+  +           + A +FY RY  D+ L ++ G + +R SI+WSRI P G   G VNQ+GV++Y+NL  E     ++PFVTL H+DTP+ L  + G FL+ K +  F DYA+ CF
Sbjct:    6 PDDFIFGGATAAYQAEGATQTDGKGRVAWDTYLEENY-----WYTAEPASDFYNRYPVDLELSERFGVNGIRISIAWSRIFPKGY--GEVNQKGVEYYHNLFKECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEFCF 146          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STAEQ (6-phospho-beta-galactosidase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=lacG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26
Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 3
Query:  255 PPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            P +F+FG A++AYQ EGA    G+    WDT+  +           + A +FY RY  D+ L ++ G + +R SI+WSRI P G   G VNQ+GV++Y+NL  E     ++PFVTL H+DTP+ L  + G FL+ K +  F DYA+ CF
Sbjct:    6 PDDFIFGGATAAYQAEGATQTDGKGRVAWDTYLEENY-----WYTAEPASDFYNRYPVDLELSERFGVNGIRISIAWSRIFPKGY--GEVNQKGVEYYHNLFKECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEFCF 146          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STRU0 (6-phospho-beta-galactosidase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=lacG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 60/151 (39.74%), Postives = 87/151 (57.62%), Query Frame = 3
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA    G+ P  WD +  D           + A +FY RY  D+ L ++   + +R SI+WSR+ P G   G VN++GV++Y+NL  E    G++PFVTL H+DTP+AL    G FL+   +  F  YA  CF
Sbjct:    4 TLPKDFIFGGATAAYQAEGATKTDGKGPVAWDKYLEDNY-----WYTAEPASDFYNRYPVDLKLAEEYNVNGIRISIAWSRVFPTGY--GEVNRKGVEYYHNLFAECHKRGVEPFVTLHHFDTPEALHSN-GDFLNRDNIDHFVAYAAFCF 146          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STAAW (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain MW2) GN=lacG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 3
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA +  G+    WDT+  +           + A +FY RY  D+ L ++ G + +R SI+WSRI P+G   G VN +GV++Y+ L  E     ++PFVTL H+DTP+ L  + G FL+ K +  F DYA+ CF
Sbjct:    4 TLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENY-----WYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCF 146          
The following BLAST results are available for this feature:
BLAST of FC868999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
LACG_STRSV1.098e-2641.726-phospho-beta-galactosidase OS=Streptococcus sang... [more]
LACG_LACLA1.873e-2641.066-phospho-beta-galactosidase OS=Lactococcus lactis... [more]
LACG_STRMU3.195e-2640.406-phospho-beta-galactosidase OS=Streptococcus muta... [more]
LACG_LACAC3.195e-2641.726-phospho-beta-galactosidase OS=Lactobacillus acid... [more]
LACG_CLOAB3.195e-2639.476-phospho-beta-galactosidase OS=Clostridium acetob... [more]
LACG_STRA34.173e-2641.066-phospho-beta-galactosidase OS=Streptococcus agal... [more]
LACG_STAES7.117e-2641.616-phospho-beta-galactosidase OS=Staphylococcus epi... [more]
LACG_STAEQ7.117e-2641.616-phospho-beta-galactosidase OS=Staphylococcus epi... [more]
LACG_STRU01.342e-2439.746-phospho-beta-galactosidase OS=Streptococcus uber... [more]
LACG_STAAW1.342e-2439.746-phospho-beta-galactosidase OS=Staphylococcus aur... [more]

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Properties
Property NameValue
Genbank descriptionC31007D10EF AbioticL1 Citrus clementina cDNA clone C31007D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868999 ID=FC868999; Name=FC868999; organism=Citrus clementina; type=EST; length=701bp
GGAAATTGAATAAAATAATAGCTCACTGTACGTACTGCTTAATTAATATA
TGTATTTGGGGGCGGGTTAGGTTATGCATCATATACTACTATTAGTTCAT
AATGATGAAGCTTCCATATATAATTCATCGGAAGGGAGAGGTAGGGAGAG
TGGAAGTTAAATTTCAGAATCTTTTTGTCTGTTATCTGATCACATCTTCG
ATTTGCTTATCATCTGTATGCCTCCCCTGCTACGGCTCCACTCGGAATAG
CTTTCCGCCTGAGTTTTTATTTGGAACAGCATCAAGTGCTTACCAGTATG
AAGGAGCAGCTCACGTTGGAGGGAGGAAACCAAGCGTATGGGATACCTTC
GCCATGGATCAACCAGAGAAAATTTTGGACCACAGTAATGGGGATGTAGC
TGACAACTTTTACTTTCGTTACAAGGAGGACATTGCTTTGGTGAAGCAAG
TTGGTTTCGACTCCCTAAGATTCTCAATATCATGGTCCAGAATTTTACCT
CATGGAAATATTAGTGGGGGAGTGAACCAACAAGGTGTCGATTTCTACAA
TAATCTCATCAACGAGCTCATTTCATACGGCTTAAAGCCCTTTGTGACTT
TATTCCACTGGGACACTCCACAAGCTCTAGAAGATGAATATGGTGGATTC
TTAAGTCCTAAAATTGTAAAAGATTTTGGTGACTATGCGGACTTGTGCTT
C
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