FC868999

Overview
NameFC868999
Unique NameFC868999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STAAU (6-phospho-beta-galactosidase OS=Staphylococcus aureus GN=lacG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 3 
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA +  G+    WDT+  +           + A +FY RY  D+ L ++ G + +R SI+WSRI P+G   G VN +GV++Y+ L  E     ++PFVTL H+DTP+ L  + G FL+ K +  F DYA+ CF
Sbjct:    4 TLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENY-----WYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCF 146
[Close]
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STAAT (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=lacG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 3 
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA +  G+    WDT+  +           + A +FY RY  D+ L ++ G + +R SI+WSRI P+G   G VN +GV++Y+ L  E     ++PFVTL H+DTP+ L  + G FL+ K +  F DYA+ CF
Sbjct:    4 TLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENY-----WYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCF 146
[Close]
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STAAS (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain MSSA476) GN=lacG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 3 
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA +  G+    WDT+  +           + A +FY RY  D+ L ++ G + +R SI+WSRI P+G   G VN +GV++Y+ L  E     ++PFVTL H+DTP+ L  + G FL+ K +  F DYA+ CF
Sbjct:    4 TLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENY-----WYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCF 146
[Close]
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STAAR (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain MRSA252) GN=lacG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 3 
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA +  G+    WDT+  +           + A +FY RY  D+ L ++ G + +R SI+WSRI P+G   G VN +GV++Y+ L  E     ++PFVTL H+DTP+ L  + G FL+ K +  F DYA+ CF
Sbjct:    4 TLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENY-----WYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCF 146
[Close]
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STAAN (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain N315) GN=lacG PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 3 
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA +  G+    WDT+  +           + A +FY RY  D+ L ++ G + +R SI+WSRI P+G   G VN +GV++Y+ L  E     ++PFVTL H+DTP+ L  + G FL+ K +  F DYA+ CF
Sbjct:    4 TLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENY-----WYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCF 146
[Close]
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STAAM (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=lacG PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 3 
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA +  G+    WDT+  +           + A +FY RY  D+ L ++ G + +R SI+WSRI P+G   G VN +GV++Y+ L  E     ++PFVTL H+DTP+ L  + G FL+ K +  F DYA+ CF
Sbjct:    4 TLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENY-----WYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCF 146
[Close]
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STAAE (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain Newman) GN=lacG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 3 
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA +  G+    WDT+  +           + A +FY RY  D+ L ++ G + +R SI+WSRI P+G   G VN +GV++Y+ L  E     ++PFVTL H+DTP+ L  + G FL+ K +  F DYA+ CF
Sbjct:    4 TLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENY-----WYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCF 146
[Close]
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STAAC (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain COL) GN=lacG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 3 
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA +  G+    WDT+  +           + A +FY RY  D+ L ++ G + +R SI+WSRI P+G   G VN +GV++Y+ L  E     ++PFVTL H+DTP+ L  + G FL+ K +  F DYA+ CF
Sbjct:    4 TLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENY-----WYTAEPASDFYDRYPVDLELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCF 146
[Close]
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STAAB (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=lacG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 3 
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA +  G+    WDT+  +           + A +FY RY  D+ L ++ G + +R SI+WSRI P+G   G VN +GV++Y+ L  E     ++PFVTL H+DTP+ L  + G FL+ K +  F DYA+ CF
Sbjct:    4 TLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENY-----WYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCF 146
[Close]
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LACG_STAA9 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain JH9) GN=lacG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 3 
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + P +F+FG A++AYQ EGA +  G+    WDT+  +           + A +FY RY  D+ L ++ G + +R SI+WSRI P+G   G VN +GV++Y+ L  E     ++PFVTL H+DTP+ L  + G FL+ K +  F DYA+ CF
Sbjct:    4 TLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENY-----WYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCF 146
The following BLAST results are available for this feature:
BLAST of FC868999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
LACG_STAAU1.342e-2439.746-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAT1.342e-2439.746-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAS1.342e-2439.746-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAR1.342e-2439.746-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAN1.342e-2439.746-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAM1.342e-2439.746-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAE1.342e-2439.746-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAC1.342e-2439.746-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAB1.342e-2439.746-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA91.342e-2439.746-phospho-beta-galactosidase OS=Staphylococcus aur... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31007D10EF AbioticL1 Citrus clementina cDNA clone C31007D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868999 ID=FC868999; Name=FC868999; organism=Citrus clementina; type=EST; length=701bp
GGAAATTGAATAAAATAATAGCTCACTGTACGTACTGCTTAATTAATATA
TGTATTTGGGGGCGGGTTAGGTTATGCATCATATACTACTATTAGTTCAT
AATGATGAAGCTTCCATATATAATTCATCGGAAGGGAGAGGTAGGGAGAG
TGGAAGTTAAATTTCAGAATCTTTTTGTCTGTTATCTGATCACATCTTCG
ATTTGCTTATCATCTGTATGCCTCCCCTGCTACGGCTCCACTCGGAATAG
CTTTCCGCCTGAGTTTTTATTTGGAACAGCATCAAGTGCTTACCAGTATG
AAGGAGCAGCTCACGTTGGAGGGAGGAAACCAAGCGTATGGGATACCTTC
GCCATGGATCAACCAGAGAAAATTTTGGACCACAGTAATGGGGATGTAGC
TGACAACTTTTACTTTCGTTACAAGGAGGACATTGCTTTGGTGAAGCAAG
TTGGTTTCGACTCCCTAAGATTCTCAATATCATGGTCCAGAATTTTACCT
CATGGAAATATTAGTGGGGGAGTGAACCAACAAGGTGTCGATTTCTACAA
TAATCTCATCAACGAGCTCATTTCATACGGCTTAAAGCCCTTTGTGACTT
TATTCCACTGGGACACTCCACAAGCTCTAGAAGATGAATATGGTGGATTC
TTAAGTCCTAAAATTGTAAAAGATTTTGGTGACTATGCGGACTTGTGCTT
C
back to top