FC869008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_YERE8 (Porphobilinogen deaminase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=hemC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23 Identity = 63/125 (50.40%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 329 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 IIRI TR SPLAL QAH ++ L A HP L +++V + T GD IL PLA +GGKGLF KE++ AL+ + DIAVHSMKDVP PE L +R+D RDAF+ PA SIV Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANHPGLQ----VELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSINYAHLDELPAGSIV 125
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_PELPD (Porphobilinogen deaminase OS=Pelobacter propionicus (strain DSM 2379) GN=hemC PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23 Identity = 57/108 (52.78%), Postives = 74/108 (68.52%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI 655 +RIGTR S LAL QA+ +++L +P + + + IKT GD+IL PLA +GGKGLF KEI+EA++ +IDIAVHSMKDVPT PE L C +RED RDA + Sbjct: 6 LRIGTRASQLALWQANWVKSELEKRYPAME----VTLTKIKTMGDRILDVPLAQVGGKGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVV 109
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_MANSM (Porphobilinogen deaminase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=hemC PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23 Identity = 59/124 (47.58%), Postives = 79/124 (63.71%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 ++I TR SPLAL QA+ +++L AL+P+L +++V + T GD IL PLA IGGKGLF KE++ AL+N + DIAVHSMKDVP P+ L +RED RDAF+ P +IV Sbjct: 7 LKIATRQSPLALWQANYVKDRLTALYPDLQ----VELVTMVTKGDVILDTPLAKIGGKGLFVKELEHALLNHEADIAVHSMKDVPMEFPQGLGLSVICKREDPRDAFVSNKYRSLAELPQGAIV 126
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_ENTS8 (Porphobilinogen deaminase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=hemC PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23 Identity = 60/125 (48.00%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 329 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 ++RI TR SPLAL QA + +L A HP L +++V + T GD IL PLA +GGKGLF KE++ A+++ + DIAVHSMKDVP PE L +RED RDAF+ PA SIV Sbjct: 5 VLRIATRQSPLALWQAQYVKQRLEACHPGLT----VELVPMVTRGDVILDTPLAKVGGKGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYKSLDEMPAGSIV 125
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_ACIF5 (Porphobilinogen deaminase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=hemC PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23 Identity = 54/108 (50.00%), Postives = 74/108 (68.52%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI 655 +RIGTR SPLA+ QA R L+ LHP +A ++I+ + T+GD +L PL +GGKGLF KEI++AL ++D+AVHSMKDVP P+ + + REDVRDAF+ Sbjct: 5 LRIGTRASPLAVWQAEHVRAALLRLHPGMA----VEIITMTTSGDVLLDAPLHALGGKGLFVKEIEDALQQRRVDVAVHSMKDVPALQPDGLEIVAIMAREDVRDAFV 108
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_ACIF2 (Porphobilinogen deaminase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=hemC PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23 Identity = 54/108 (50.00%), Postives = 74/108 (68.52%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI 655 +RIGTR SPLA+ QA R L+ LHP +A ++I+ + T+GD +L PL +GGKGLF KEI++AL ++D+AVHSMKDVP P+ + + REDVRDAF+ Sbjct: 5 LRIGTRASPLAVWQAEHVRAALLRLHPGMA----VEIITMTTSGDVLLDAPLHALGGKGLFVKEIEDALQQRRVDVAVHSMKDVPALQPDGLEIVAIMAREDVRDAFV 108
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_SERP5 (Porphobilinogen deaminase OS=Serratia proteamaculans (strain 568) GN=hemC PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22 Identity = 61/125 (48.80%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 329 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 IIRI TR SPLAL QAH + +LMA HP L +++V + T GD IL PLA +GGKGLF KE++ AL++ + DIAVHSMKDVP P L +R+D RDAF+ P S+V Sbjct: 5 IIRIATRQSPLALWQAHYVQQRLMANHPGLQ----VELVPMVTKGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPVDFPAGLGLVTICERDDPRDAFVSNRFTSLDQLPQGSVV 125
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_METCA (Porphobilinogen deaminase OS=Methylococcus capsulatus GN=hemC PE=3 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.654e-22 Identity = 57/120 (47.50%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPA 691 +RI TR SPLAL QA ++L A HP+L +++V + T GDK+L PLA +GGKGLF KE+++ L+ + DIAVHSMKDVP PE L L+RED RDA + PA Sbjct: 18 LRIATRKSPLALWQAEYVASRLRAAHPDLR----VELVGMTTRGDKLLDAPLAKVGGKGLFVKELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPA 133
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_YERIN (Porphobilinogen deaminase (Fragment) OS=Yersinia intermedia GN=hemC PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.161e-22 Identity = 62/125 (49.60%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 329 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 IIRI TR SPLAL QAH ++ L A HP L +++V + T GD IL PLA +GGKGLF KE++ AL++ + DIAVHSMKDVP PE L + +D RDAF+ PA SIV Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANHPGLQ----VELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEPDDPRDAFVSPHFAHIDDLPAGSIV 125
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_SYNFM (Porphobilinogen deaminase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=hemC PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.161e-22 Identity = 55/109 (50.46%), Postives = 74/109 (67.89%), Query Frame = 2 Query: 329 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI 655 +IRIGTRGS LAL Q+ + + AL P L +++ +++TTGDKIL PLA +GGKGLF KEI++AL+ +D+AVHSMKDVP LPE + +RED RD + Sbjct: 5 VIRIGTRGSMLALKQSGNVKAAMEALWPGLR----VELQVVRTTGDKILDVPLAKVGGKGLFVKEIEDALLARTVDLAVHSMKDVPAILPEGLEIGAIPKREDPRDVIV 109 The following BLAST results are available for this feature:
BLAST of FC869008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 432
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869008 ID=FC869008; Name=FC869008; organism=Citrus clementina; type=EST; length=703bpback to top |