FC869008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_HYPNA (Porphobilinogen deaminase OS=Hyphomonas neptunium (strain ATCC 15444) GN=hemC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21 Identity = 55/110 (50.00%), Postives = 75/110 (68.18%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAI--QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI 655 +R+GTRGSPLALAQAH+ + + A A GA +IV TTGDK+ ++ L + GGKGLFT+E+D+AL ++D+AVHS+KDVP+ LP I +RED RD F+ Sbjct: 13 LRLGTRGSPLALAQAHQIADGIRA-----ASAGAYDCEIVAFTTTGDKLTTERLINSGGKGLFTRELDDALSRGELDLAVHSLKDVPSVLPPGQIFAAFPKREDPRDGFL 117
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_CAMFF (Porphobilinogen deaminase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=hemC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21 Identity = 54/108 (50.00%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI 655 I+I +R S LAL Q H R+ L +AQ +++I+ +KT GD IL PLA IGGKGLFTKE++ +++ DIAVHS+KDVPT P+ L C REDVRDA + Sbjct: 3 IKIASRNSALALWQTHHIRDLL------IAQGHSVEIITMKTKGDVILDTPLAKIGGKGLFTKELENSMLEGSADIAVHSLKDVPTTFPDGLKLACVCSREDVRDAML 104
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_WOLWR (Porphobilinogen deaminase OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=hemC PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.829e-21 Identity = 55/109 (50.46%), Postives = 74/109 (67.89%), Query Frame = 2 Query: 329 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI 655 +++IGTRGS LA+ QA E + KL+ P L+ I+IV IKT+GDK + LA+IGGKGLF KEI+ L+ + ID+AVHS+KDVP + +PC L+R DAFI Sbjct: 2 LVKIGTRGSKLAVVQALEAKQKLLDSFPNLS----IEIVKIKTSGDKYANANLAEIGGKGLFIKEIEAELLENNIDMAVHSLKDVPAFFSWGLTIPCVLERLSPCDAFI 106
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_EHRCR (Porphobilinogen deaminase OS=Ehrlichia chaffeensis (strain Arkansas) GN=hemC PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.829e-21 Identity = 56/108 (51.85%), Postives = 73/108 (67.59%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI 655 IRIGTRGS LA+AQ E +N L PE++ +QIV IKT+GD PL+ IGGK LF KEI+EAL+ ++D+AVHS+KD+P + E I+PC L+R D FI Sbjct: 3 IRIGTRGSILAIAQTLEIKNLLNRYFPEIS----VQIVKIKTSGDINNQVPLSAIGGKSLFIKEIEEALLMGKVDLAVHSVKDIPAFYCEGLIIPCVLKRNSPYDVFI 106
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_SHEWM (Porphobilinogen deaminase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=hemC PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.389e-21 Identity = 56/125 (44.80%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 329 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 +IRI TR SPLAL QA + +L HP+L ++++ + T GD IL PLA +GGKGLF KE++ A++ ++ DIAVHSMKDVP PE L +RED RDAF+ P ++V Sbjct: 5 VIRIATRKSPLALWQAEFVKAELEKFHPDLT----VELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLENRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNYKSISELPKGAVV 125
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_RICCK (Porphobilinogen deaminase OS=Rickettsia canadensis (strain McKiel) GN=hemC PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.389e-21 Identity = 56/124 (45.16%), Postives = 78/124 (62.90%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 IRIGTR SPLAL Q + ++ P++ + IV I T+GD I ++PL DIGGK LF KEI++AL++ +ID+AVHS+KDVP +PE I+ L+RED RD F+ P +I+ Sbjct: 5 IRIGTRKSPLALIQTNLVIQQIKQFVPDINYK----IVPITTSGDLIQNKPLYDIGGKALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEDLIIAAVLEREDPRDVFVCLKYKSIEELPQNAII 124
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_PASMU (Porphobilinogen deaminase OS=Pasteurella multocida GN=hemC PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.389e-21 Identity = 58/124 (46.77%), Postives = 75/124 (60.48%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 +RI TR SPLAL QA+ + L +H L +++V + T GD IL PLA IGGKGLF KE+++AL+ + DIAVHSMKDVP P +L QRED RDAF+ PA ++V Sbjct: 7 LRIATRQSPLALWQANYVKACLEKIHAGLV----VELVPMVTKGDVILDTPLAKIGGKGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLMELPAGAVV 126
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_PSEPK (Porphobilinogen deaminase OS=Pseudomonas putida (strain KT2440) GN=hemC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 60/124 (48.39%), Postives = 75/124 (60.48%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 IRI TR S LAL QA + +L H L + +V + + GDK+L PLA IGGKGLF KE++ AL++++ DIAVHSMKDVP PE L C +RED RDAF+ PA SIV Sbjct: 6 IRIATRKSALALWQAEYVKARLEQAHTGLQ----VTLVPMVSRGDKLLDAPLAKIGGKGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEALPAGSIV 125
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_PSEP1 (Porphobilinogen deaminase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=hemC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 60/124 (48.39%), Postives = 75/124 (60.48%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 IRI TR S LAL QA + +L H L + +V + + GDK+L PLA IGGKGLF KE++ AL++++ DIAVHSMKDVP PE L C +RED RDAF+ PA SIV Sbjct: 6 IRIATRKSALALWQAEYVKARLEQAHTGLQ----VTLVPMVSRGDKLLDAPLAKIGGKGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLETLPAGSIV 125
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_PSEFS (Porphobilinogen deaminase OS=Pseudomonas fluorescens (strain SBW25) GN=hemC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 59/124 (47.58%), Postives = 74/124 (59.68%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 IRI TR S LAL QA + +L HP L + +V + + GDK+L PL+ IGGKGLF KE++ AL+ ++ DIAVHSMKDVP PE L C +RED RDAF+ P SIV Sbjct: 6 IRIATRKSALALWQAEYVKARLEQAHPGLK----VSLVPMVSRGDKLLDSPLSKIGGKGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDALPLGSIV 125 The following BLAST results are available for this feature:
BLAST of FC869008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 432
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869008 ID=FC869008; Name=FC869008; organism=Citrus clementina; type=EST; length=703bpback to top |