FC869024 | Citrus Genome Database

Overview


Name	FC869024
Unique Name	FC869024
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	565

Libraries


Library Name	Type
AbioticL1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Ccv1_Contig9336	contig	Ccv1_Contig9336:103..668.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.929e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 127.872 bits (320), Expect = 3.421e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 77.411 bits (189), Expect = 2.889e-14
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVESSDTID+VKAKIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 2.889e-14
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.098e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 126.716 bits (317), Expect = 7.622e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 77.411 bits (189), Expect = 2.889e-14
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVESSDTID+VKAKIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 2.889e-14
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.434e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 126.331 bits (316), Expect = 9.955e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 75.8702 bits (185), Expect = 8.245e-14
Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVESSDTI++VKAKIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 8.245e-14
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.446e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 125.561 bits (314), Expect = 1.698e-28
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 76.2554 bits (186), Expect = 6.344e-14
Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVESSDTID+VK+KIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 6.344e-14
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.446e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 125.561 bits (314), Expect = 1.698e-28
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 76.2554 bits (186), Expect = 6.344e-14
Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVESSDTID+VK+KIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 6.344e-14
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_KLULA (Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.446e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 125.561 bits (314), Expect = 1.698e-28
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 76.2554 bits (186), Expect = 6.344e-14
Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVESSDTID+VK+KIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 6.344e-14
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.446e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 125.561 bits (314), Expect = 1.698e-28
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 76.2554 bits (186), Expect = 6.344e-14
Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVESSDTID+VK+KIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 6.344e-14
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_CANAL (Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.446e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 125.561 bits (314), Expect = 1.698e-28
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 76.2554 bits (186), Expect = 6.344e-14
Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVESSDTID+VK+KIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 6.344e-14
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.195e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 125.176 bits (313), Expect = 2.218e-28
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 74.7146 bits (182), Expect = 1.810e-13
Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVESSDTI +VKAK+QDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 1.810e-13
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.173e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 124.79 bits (312), Expect = 2.896e-28
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 75.485 bits (184), Expect = 1.072e-13
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVESSDTID+VK KIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 1.072e-13
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

The following BLAST results are available for this feature:

BLAST of FC869024 vs. ExPASy Swiss-Prot

BLAST of FC869024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98


Match Name	E-value	Identity	Description
UBIQ_ARATH	4.929e-36	100.00	Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=...	[more]
UBIQ_COPCO	1.098e-35	98.68	Ubiquitin OS=Coprinus congregatus PE=1 SV=1	[more]
UBIQ_CHLRE	1.434e-35	98.68	Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=...	[more]
UBIQ_YEAST	2.446e-35	97.37	Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1...	[more]
UBIQ_SCHPO	2.446e-35	97.37	Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=...	[more]
UBIQ_KLULA	2.446e-35	97.37	Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=...	[more]
UBIQ_CRYNE	2.446e-35	97.37	Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ...	[more]
UBIQ_CANAL	2.446e-35	97.37	Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1	[more]
UBL1_ORYSJ	3.195e-35	97.37	Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja...	[more]
UBIQ_NEUCR	4.173e-35	97.37	Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	C31007F12EF AbioticL1 Citrus clementina cDNA clone C31007F12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC869024 ID=FC869024; Name=FC869024; organism=Citrus clementina; type=EST; length=565bp
CCATTACTCTCGAAGTCGAGAGCTCCGACACCATCGACAACGTCAAGGCC
AAGATCCAAGACAAGGAAGGAATCCCTCCGGACCAGCAGCGTCTGATCTT
CGCCGGAAAACAGCTCGAAGACGGCCGCACCTTGGCCGATTACAATATCC
AAAAGGAATCGACGCTTCATCTGGTGCTTCGTCTCCGTGGAGGCATGCAG
ATCTTCGTGAAAACCCTAACCGGCAAGACCATTACTCTCGAAGTTGAGAG
CTCCGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGA
TTCCGCCGGACCAGCAGAGGCTGATCTTCGCCGGAAAGCAACTCGAGGAC
GGCCGCACCTTGGCCGATTACAATATCCAGAAGGAATCAACTCTTCACCT
CGTGCTTCGTCTCCGTGGGGGCATGCAGATATTCGTCAAAACCCTAACGG
GAAAGACGATTACCCTCGAAGTCGAGAGCTCCGACACGATCGACCACGTC
AAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACAGCAGCGTTTG
ATCTTCGCTGGCAAG