FC869024 | Citrus Genome Database

Overview


Name	FC869024
Unique Name	FC869024
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	565

Libraries


Library Name	Type
AbioticL1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Ccv1_Contig9336	contig	Ccv1_Contig9336:103..668.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.214e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 123.25 bits (308), Expect = 8.427e-28
Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 73.9442 bits (180), Expect = 3.056e-13
Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVE SDTI++VKAKIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 3.056e-13
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.214e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 123.25 bits (308), Expect = 8.427e-28
Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 73.9442 bits (180), Expect = 3.056e-13
Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVE SDTI++VKAKIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 3.056e-13
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.586e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 122.865 bits (307), Expect = 1.101e-27
Identity = 60/64 (93.75%), Postives = 64/64 (100.00%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 73.559 bits (179), Expect = 3.972e-13
Identity = 35/39 (89.74%), Postives = 39/39 (100.00%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITL+VE+SDTI++VKAKIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 3.972e-13
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.071e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 2 Score: 122.479 bits (306), Expect = 1.437e-27
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:   13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 3 Score: 73.9442 bits (180), Expect = 3.056e-13
Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVE SDTI++VKAKIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 3.056e-13
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.705e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 122.094 bits (305), Expect = 1.877e-27
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 72.7886 bits (177), Expect = 6.706e-13
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITL+VE SDTI++VKAKIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 6.706e-13
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.532e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 121.709 bits (304), Expect = 2.452e-27
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            I LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 IALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 72.7886 bits (177), Expect = 6.706e-13
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTI LEVE+SDTI++VKAKIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 6.706e-13
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.532e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 121.709 bits (304), Expect = 2.452e-27
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 72.4034 bits (176), Expect = 8.714e-13
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVE SD+I++VKAKIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 8.714e-13
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.532e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 121.709 bits (304), Expect = 2.452e-27
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 72.4034 bits (176), Expect = 8.714e-13
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVE SD+I++VKAKIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 8.714e-13
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.532e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 121.709 bits (304), Expect = 2.452e-27
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 72.4034 bits (176), Expect = 8.714e-13
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITLEVE SD I++VKAKIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 8.714e-13
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

[Close]

BLAST of FC869024 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.028e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  195 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 422
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 120.168 bits (300), Expect = 7.134e-27
Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 3

Query:    3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 194
            ITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 70.8626 bits (172), Expect = 2.483e-12
Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 3

Query:  423 MQIFVKTLTGKTITLEVESSDTIDHVKAKIQDKEGIPPD 539
            MQIFVKTLTGKTITL+VE SD+ID+VK KIQDKEGIPPD
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPD 39

HSP 4 Score: 21.557 bits (44), Expect = 2.483e-12
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  539 QQRLIFAGK 565
            QQRLIFAGK
Sbjct:   40 QQRLIFAGK 48

The following BLAST results are available for this feature:

BLAST of FC869024 vs. ExPASy Swiss-Prot

BLAST of FC869024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98


Match Name	E-value	Identity	Description
UBIQ_CAMDR	1.214e-34	96.05	Ubiquitin OS=Camelus dromedarius PE=3 SV=2	[more]
UBIQ_BOVIN	1.214e-34	96.05	Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1	[more]
UBIQ_TETPY	1.586e-34	94.74	Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ...	[more]
UBIQ_SHEEP	2.071e-34	94.74	Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2	[more]
UBIQ_EIMBO	2.705e-34	94.74	Ubiquitin OS=Eimeria bovis PE=2 SV=1	[more]
UBIQ_TRYBB	3.532e-34	94.74	Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1	[more]
UBIQ_STRPU	3.532e-34	94.74	Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV...	[more]
UBIQ_ENCCU	3.532e-34	94.74	Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074...	[more]
UBIQ_DICDI	3.532e-34	94.74	Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1...	[more]
UBIQ_PHYIN	1.028e-33	93.42	Ubiquitin OS=Phytophthora infestans PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	C31007F12EF AbioticL1 Citrus clementina cDNA clone C31007F12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC869024 ID=FC869024; Name=FC869024; organism=Citrus clementina; type=EST; length=565bp
CCATTACTCTCGAAGTCGAGAGCTCCGACACCATCGACAACGTCAAGGCC
AAGATCCAAGACAAGGAAGGAATCCCTCCGGACCAGCAGCGTCTGATCTT
CGCCGGAAAACAGCTCGAAGACGGCCGCACCTTGGCCGATTACAATATCC
AAAAGGAATCGACGCTTCATCTGGTGCTTCGTCTCCGTGGAGGCATGCAG
ATCTTCGTGAAAACCCTAACCGGCAAGACCATTACTCTCGAAGTTGAGAG
CTCCGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGA
TTCCGCCGGACCAGCAGAGGCTGATCTTCGCCGGAAAGCAACTCGAGGAC
GGCCGCACCTTGGCCGATTACAATATCCAGAAGGAATCAACTCTTCACCT
CGTGCTTCGTCTCCGTGGGGGCATGCAGATATTCGTCAAAACCCTAACGG
GAAAGACGATTACCCTCGAAGTCGAGAGCTCCGACACGATCGACCACGTC
AAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACAGCAGCGTTTG
ATCTTCGCTGGCAAG