FC869025

Overview
NameFC869025
Unique NameFC869025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9454 contig Ccv1_Contig9454:259..1002. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: XYLD_RHIME (Putative D-xylulose reductase OS=Rhizobium meliloti GN=R02526 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.444e-44
Identity = 88/170 (51.76%), Postives = 115/170 (67.65%), Query Frame = 1
Query:  208 LGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPR 717
            L P DVL+G++ VG+CGSDVHY    +   FVV EPM++GHE AGV+ +VGS+V+ L  GDRV +EPGI        K G YN+ P ++F+ATPPVHG L  +VVHPA   ++LPD+VS  EGAM EP ++G+ A  RA I P     +MGAGPIG++T L A A G  +
Sbjct:   24 LSPTDVLIGIRTVGVCGSDVHYYTHGKIGPFVVNEPMILGHEAAGVVLEVGSQVRHLKKGDRVCMEPGIPDLSSRSSKLGIYNVDPSVRFWATPPVHGCLTPEVVHPAAFTYRLPDHVSFAEGAMVEPFAIGVQAALRAGIRPGDVGAVMGAGPIGMMTALAALAGGCSK 193          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: DHSO_BOMMO (Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.875e-43
Identity = 87/197 (44.16%), Postives = 125/197 (63.45%), Query Frame = 1
Query:  145 NMAAWLMGVNTLKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDV 735
            N AA L G N ++I+   +P +   +VL+ +  VGICGSDV    T  C   V+ +P+VIGHE AG + KVG +V +L  GDRVA+EP   C  C+ CK G+YNLC E ++ ++    G+L     H AD C KLPDN+++EEGA  +PL++ +HAC RA I   + ++I+GAGPIG++  + A+A GA +    DV
Sbjct:    4 NYAAVLHGANDVRIEKIPVPEINDDEVLIKIDCVGICGSDVKLYSTGTCGADVIDKPIVIGHEGAGTVVKVGDKVSSLRVGDRVAIEPTQPCRSCELCKRGKYNLCVEPRYCSSMGAPGNLCRYYKHVADFCHKLPDNLTMEEGAAVQPLAIVIHACNRAKITLGSKIVILGAGPIGILCAMSAKAMGASKIILTDV 200          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: DHSO1_YEAST (Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=SOR1 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.449e-43
Identity = 92/200 (46.00%), Postives = 125/200 (62.50%), Query Frame = 1
Query:  145 NMAAWLMGVNTLKIQPFELPSL-GPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDD 741
            N A  L  V  + I+   +P++  P+ V + +KA GICGSD+HY ++     +++K PMV+GHE +G + +VG  V  +  GDRVA+EPG+     D  K GRYNLCP M F ATPP+ G+L    + P D   KLP+ VS EEGA  EPLSVG+H+ + A +   T V++ GAGP+GL+T   ARAFGA     VDV D
Sbjct:    6 NPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHESSGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGRYNLCPHMAFAATPPIDGTLVKYYLSPEDFLVKLPEGVSYEEGACVEPLSVGVHSNKLAGVRFGTKVVVFGAGPVGLLTGAVARAFGATDVIFVDVFD 205          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: DHSO2_YEAST (Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=SOR2 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.215e-42
Identity = 91/200 (45.50%), Postives = 124/200 (62.00%), Query Frame = 1
Query:  145 NMAAWLMGVNTLKIQPFELPSL-GPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDD 741
            N A  L  V  + I+   +P++  P+ V + +KA GICGSD+HY ++     +++K PMV+GHE +G + +VG  V  +  GDRVA+EPG+     D  K G YNLCP M F ATPP+ G+L    + P D   KLP+ VS EEGA  EPLSVG+H+ + A +   T V++ GAGP+GL+T   ARAFGA     VDV D
Sbjct:    6 NPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHESSGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGSYNLCPHMAFAATPPIDGTLVKYYLSPEDFLVKLPEGVSYEEGACVEPLSVGVHSNKLAGVRFGTKVVVFGAGPVGLLTGAVARAFGATDVIFVDVFD 205          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: XYLD_AGRT5 (Putative D-xylulose reductase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=Atu4318 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.486e-40
Identity = 87/192 (45.31%), Postives = 116/192 (60.42%), Query Frame = 1
Query:  178 LKIQPFELPS------LGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDV 735
            L ++ F++P       LGP DV +    VGICGSDVHY    +   FVV  PMV+GHE +G + + GS+V  L  GDRV +EPGI        K G YN+ P ++F+ATPP+HG L  +V+HPA   +KLPDNVS  EGAM EP ++G+ A  RA I P    ++ GAGPIG++  L A A G  +    D+
Sbjct:   12 LSLRDFDIPGGAGSGELGPKDVRIRTHTVGICGSDVHYYTHGKIGHFVVNAPMVLGHEASGTVIETGSDVTHLKIGDRVCMEPGIPDPTSRASKLGIYNVDPAVRFWATPPIHGCLTPEVIHPAAFTYKLPDNVSFAEGAMVEPFAIGMQAALRARIQPGDIAVVTGAGPIGMMVALAALAGGCAKVIVADL 203          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: XYLD_RHILO (Putative D-xylulose reductase OS=Rhizobium loti GN=mlr4915 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.323e-40
Identity = 83/181 (45.86%), Postives = 112/181 (61.88%), Query Frame = 1
Query:  178 LKIQPFELP-SLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPR 717
            L ++   LP  +GP DV + +  VG+CGSDVHY        +VV+ PMV+GHE AG + + G+ V+T   GDRV +EPG+        K G YN+ P++ F+ATPPVHG LA   VHPA   +KLPDNVS  EGAM EP ++G+ A  RA I P    +++G GPIG++  L A A G  +
Sbjct:   12 LSLREIALPLDVGPDDVKIAIHTVGVCGSDVHYYTHGAIGSYVVRAPMVLGHEAAGTVVETGANVETFKAGDRVCMEPGVPNLSSRATKLGIYNVDPDVSFWATPPVHGVLAPYAVHPAAFTYKLPDNVSFAEGAMVEPFAIGMQAASRARIVPGDVAVVVGCGPIGIMIALAALAGGCSK 192          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: XYL2_YEAST (D-xylulose reductase OS=Saccharomyces cerevisiae GN=XYL2 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.630e-40
Identity = 85/174 (48.85%), Postives = 109/174 (62.64%), Query Frame = 1
Query:  214 PYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDV 735
            P +V++ +KA GICGSD+HY    R  ++VV+ PMV+GHE +G++  +G  VKTL  GDRVALEPGI        K GRYNL P +KF ATPP  G+L        D  +KLPD+VS EEGA+ EPLSV +HA + A I      ++ GAGPIGL+    A  FGA     VD+
Sbjct:   31 PNEVIIQIKATGICGSDIHYYTHGRIANYVVESPMVLGHESSGIVALIGENVKTLKVGDRVALEPGIPDRFSPEMKEGRYNLDPNLKFAATPPFDGTLTKYYKTMKDFVYKLPDDVSFEEGALIEPLSVAIHANKLAKIKFGARCVVFGAGPIGLLAGKVASVFGAADVVFVDL 204          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: XYLD_MORMO (D-xylulose reductase OS=Morganella morganii PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.802e-39
Identity = 81/159 (50.94%), Postives = 104/159 (65.41%), Query Frame = 1
Query:  208 LGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 684
            LG  DV + +  VGICGSDVHY +  R   FVV EPMV+GHE +GVI   G  VK L  GDRV +EPGI   +    + G YNL P ++F+ATPP+ G L   V+HPA   FKLPDNVS  +GAM EPL++G+ +  +A I P    L++GAG IG++T
Sbjct:   25 LGDDDVEIKIHTVGICGSDVHYYQHGRIGPFVVDEPMVLGHEASGVITAAGKNVKHLKVGDRVCMEPGIPDLQSPQSRAGIYNLDPAVRFWATPPIDGCLRESVIHPAAFTFKLPDNVSFAQGAMVEPLAIGMQSATKAGIKPGDIGLVIGAGTIGIIT 183          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: YDJJ_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjJ OS=Escherichia coli (strain K12) GN=ydjJ PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.152e-39
Identity = 84/201 (41.79%), Postives = 121/201 (60.20%), Query Frame = 1
Query:  145 NMAAWLMGVNTLKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEP---MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP-VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDV 735
            N  A L    T+KI   E+P     +VL+ ++ VGICGSDVH  ++   +    K+P   + +GHECAG +  VGS V+   PGDRV +EPG+ C  C +C  G+YN+CP++ F AT P   G+L + + HP    +KLPDN+   EGA+ EP +VG+HA   A++ P   ++I+GAG IGL+T+   +  GA     VDV
Sbjct:    3 NSKAILQVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVHGFESGPFIP--PKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCLEGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLPDNMDTMEGALVEPAAVGMHAAMLADVKPGKKIIILGAGCIGLMTLQACKCLGATEIAVVDV 201          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: XYL2_PICST (D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.098e-38
Identity = 88/207 (42.51%), Postives = 119/207 (57.49%), Query Frame = 1
Query:  145 NMAAWLMGVNTLKIQPFELPSLG-PYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDD 741
            N +  L  ++ +  + ++ P +  P DVLV +K  GICGSD+H+    R  +FV+ +PMV+GHE AG + +VG  V +L  GD VA+EPGI     D  K G YNLCP M F ATP          G+L      P D   KLPD+VSLE GA+ EPLSVG+HA +  ++     V + GAGP+GL+    A+ FGA     VD+ D
Sbjct:    4 NPSLVLNKIDDISFETYDAPEISEPTDVLVQVKKTGICGSDIHFYAHGRIGNFVLTKPMVLGHESAGTVVQVGKGVTSLKVGDNVAIEPGIPSRFSDEYKSGHYNLCPHMAFAATPNSKEGEPNPPGTLCKYFKSPEDFLVKLPDHVSLELGALVEPLSVGVHASKLGSVAFGDYVAVFGAGPVGLLAAAVAKTFGAKGVIVVDIFD 210          
The following BLAST results are available for this feature:
BLAST of FC869025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
XYLD_RHIME6.444e-4451.76Putative D-xylulose reductase OS=Rhizobium melilot... [more]
DHSO_BOMMO1.875e-4344.16Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 ... [more]
DHSO1_YEAST2.449e-4346.00Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisi... [more]
DHSO2_YEAST1.215e-4245.50Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisi... [more]
XYLD_AGRT51.486e-4045.31Putative D-xylulose reductase OS=Agrobacterium tum... [more]
XYLD_RHILO4.323e-4045.86Putative D-xylulose reductase OS=Rhizobium loti GN... [more]
XYL2_YEAST9.630e-4048.85D-xylulose reductase OS=Saccharomyces cerevisiae G... [more]
XYLD_MORMO2.802e-3950.94D-xylulose reductase OS=Morganella morganii PE=1 S... [more]
YDJJ_ECOLI8.152e-3941.79Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
XYL2_PICST3.098e-3842.51D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE... [more]

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Properties
Property NameValue
Genbank descriptionC31007G01EF AbioticL1 Citrus clementina cDNA clone C31007G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869025 ID=FC869025; Name=FC869025; organism=Citrus clementina; type=EST; length=744bp
GAAACAGAATCAGAATAAATGTCAGCTTAAAATGTTGTGTACAGAGTGAA
GTCTCTTCTGTGCACTTGTGTTTTTGAAGGGTAAAAAGCAAATATGGGCA
AAGGAGGGATGTCACAAGGAGAAAAGAAGGATGGAGAAGAAGTTAACATG
GCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAACCTTTTGAGCT
TCCTTCTCTGGGACCATATGATGTTTTAGTCGGGATGAAAGCCGTTGGTA
TTTGTGGAAGTGATGTGCATTATCTCAAGACCTTGAGGTGTGTCGATTTT
GTTGTGAAAGAGCCTATGGTGATTGGGCACGAGTGTGCTGGGGTCATAGA
GAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCC
TGGAACCCGGGATCAGCTGCTGGCGATGCGATCACTGCAAAGGAGGTCGA
TACAATTTGTGTCCAGAGATGAAATTTTTTGCAACTCCGCCCGTTCATGG
TTCCCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGC
CGGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTT
GGTCTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAATGTGCT
TATCATGGGAGCAGGGCCCATAGGACTTGTCACAATGCTAGGAGCTCGTG
CTTTTGGAGCTCCTAGAAAATGTCATGTGGATGTGGATGACTAT
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