FC869025

Overview
NameFC869025
Unique NameFC869025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_LEGPH (L-threonine 3-dehydrogenase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=tdh PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.309e-22
Identity = 64/188 (34.04%), Postives = 94/188 (50.00%), Query Frame = 1
Query:  184 IQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            +Q   +P  G  DVL+ +K   ICG+D+H           +  PM +GHE  G I +VG EV+ L  G RV+ E  I+C  C +C+ G+ +LC   +      P  G  A  +  PA     LPDN++ E+ A+ +P     H     ++  E +VLI GAGPIG++     R  GA      DV+D+
Sbjct:   15 MQDIPVPEYGVNDVLIKIKRTAICGTDIHIYSWDEWAQATIPVPMTVGHEFYGEIVEVGKEVQGLKVGQRVSGEGHITCGFCRNCRAGKRHLCRNTLGVGVNRP--GCFAEYLALPATNVIALPDNITEEQAAILDPFGNAAHCALAFDVVGE-DVLITGAGPIGIMAAAIVRHIGARHVVITDVNDH 199          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_LEGPA (L-threonine 3-dehydrogenase OS=Legionella pneumophila (strain Paris) GN=tdh PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.309e-22
Identity = 64/188 (34.04%), Postives = 94/188 (50.00%), Query Frame = 1
Query:  184 IQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            +Q   +P  G  DVL+ +K   ICG+D+H           +  PM +GHE  G I +VG EV+ L  G RV+ E  I+C  C +C+ G+ +LC   +      P  G  A  +  PA     LPDN++ E+ A+ +P     H     ++  E +VLI GAGPIG++     R  GA      DV+D+
Sbjct:   15 MQDIPVPEYGVNDVLIKIKRTAICGTDIHIYSWDEWAQATIPVPMTVGHEFYGEIVEVGKEVQGLKVGQRVSGEGHITCGFCRNCRAGKRHLCRNTLGVGVNRP--GCFAEYLALPATNVIALPDNITEEQAAILDPFGNAAHCALAFDVVGE-DVLITGAGPIGIMAAAIVRHIGARHVVITDVNDH 199          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_CHRVO (L-threonine 3-dehydrogenase OS=Chromobacterium violaceum GN=tdh PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.309e-22
Identity = 63/189 (33.33%), Postives = 98/189 (51.85%), Query Frame = 1
Query:  178 LKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            L++    LP +G  D+L+ +    ICG+D+H           +  PM +GHE  GV+  +GSEV+    G RV+ E  I+C  C +C+ GR +LC            G+ A  +V PA   F +PD++S +  ++ +P    +H     N+  E +VLI GAGPIG++ +  A+  GA      DV+DY
Sbjct:   13 LEMTDVPLPEVGHNDLLIKIVKTAICGTDIHIWNWDEWSQKTIPVPMHVGHEYVGVVAGMGSEVQGFKIGQRVSGEGHITCGYCRNCRAGRRHLCRNTTGVGVNR-EGAFAEYLVIPAFNAFPIPDDISDDLASIFDPFGNAVHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARHVVITDVNDY 199          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_ALISL (L-threonine 3-dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238) GN=tdh PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.309e-22
Identity = 61/183 (33.33%), Postives = 95/183 (51.91%), Query Frame = 1
Query:  196 ELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            E P +G  D+L+ +K   ICG+DVH           +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G+ +  +V PA   FK+P  +S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA      DV+++
Sbjct:   21 EKPEMGHNDILIRIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFEIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNRT-GAFSEFLVIPAFNAFKIPAGISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEF 201          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_PYRFU (Probable L-threonine 3-dehydrogenase OS=Pyrococcus furiosus GN=tdh PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.933e-22
Identity = 60/172 (34.88%), Postives = 92/172 (53.49%), Query Frame = 1
Query:  196 ELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA 711
            ++P  GP +VL+ + A  ICG+D+H  +        ++ P ++GHE AG + +VG  V+ +  GD V++E  I C +C  CK G+Y++C   K F      G  A   V PA   +K P N+  E   + EPL   +       I  + +VLI GAGP+GL+ +  A+A GA
Sbjct:   23 DVPKPGPGEVLIKILATSICGTDLHIYEWNEWAQTRIRPPQIMGHEVAGEVVEVGPGVEGIEVGDYVSVETHIVCGKCYACKRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNVWKNPKNIPPEYATLQEPLGNAVDTVLAGPIAGK-SVLITGAGPLGLLGIAVAKASGA 192          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_LEGPC (L-threonine 3-dehydrogenase OS=Legionella pneumophila (strain Corby) GN=tdh PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.933e-22
Identity = 64/188 (34.04%), Postives = 94/188 (50.00%), Query Frame = 1
Query:  184 IQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            +Q   +P  G  DVL+ +K   ICG+D+H           +  PM +GHE  G I +VG EV+ L  G RV+ E  I+C  C +C+ G+ +LC   +      P  G  A  +  PA     LPDN++ E+ A+ +P     H     ++  E +VLI GAGPIG++     R  GA      DV+D+
Sbjct:   15 MQDVPVPEYGVNDVLIKIKRTAICGTDIHIYSWDEWAQATIPVPMTVGHEFYGEIVEVGKEVQGLKVGQRVSGEGHITCGFCRNCRAGKRHLCRNTLGVGVNRP--GCFAEYLALPATNVIALPDNITEEQAAILDPFGNAAHCALAFDVVGE-DVLITGAGPIGIMAAAIVRHIGARHVVITDVNDH 199          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_XANOR (L-threonine 3-dehydrogenase OS=Xanthomonas oryzae pv. oryzae GN=tdh PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 9.055e-22
Identity = 65/202 (32.18%), Postives = 97/202 (48.02%), Query Frame = 1
Query:  139 EVNMAAWLMGVNTLKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            E N   WL  V         +P+ GP +VL+ ++   ICG+D+H           +K  + IGHE  G + ++GS V     G RV+ E  I C  C +C+GGR +LCP         V+G+ A  +V PA   + +PD +  E  A  +P     H     ++  E +VLI GAGPIG++     +  GA      DV+D+
Sbjct:    8 ETNKGIWLEQV--------PVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIKPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTMGIGV-NVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDF 199          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_XANOM (L-threonine 3-dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=tdh PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.055e-22
Identity = 65/202 (32.18%), Postives = 97/202 (48.02%), Query Frame = 1
Query:  139 EVNMAAWLMGVNTLKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            E N   WL  V         +P+ GP +VL+ ++   ICG+D+H           +K  + IGHE  G + ++GS V     G RV+ E  I C  C +C+GGR +LCP         V+G+ A  +V PA   + +PD +  E  A  +P     H     ++  E +VLI GAGPIG++     +  GA      DV+D+
Sbjct:    8 ETNKGIWLEQV--------PVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIKPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTMGIGV-NVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDF 199          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_BURP8 (L-threonine 3-dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=tdh PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.055e-22
Identity = 63/181 (34.81%), Postives = 93/181 (51.38%), Query Frame = 1
Query:  202 PSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            P +G  DV++ +    ICG+D+H  K        +  PM +GHE  G I ++G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +V PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA      DV+DY
Sbjct:   21 PEVGHNDVMIRITRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLVIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDVNDY 199          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_SYMTH (L-threonine 3-dehydrogenase OS=Symbiobacterium thermophilum GN=tdh PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 63/187 (33.69%), Postives = 93/187 (49.73%), Query Frame = 1
Query:  184 IQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            +Q   +P++GP DVLV ++A  ICG+D H           VK P+ IGHE AG +  VG EV     GD V+ E  I C RC  C  G Y+LC   K        G+ A  V  P    +    ++  E  ++ EPL   +H     ++    +VLI G GPIG++++  A+  GA     +D+++Y
Sbjct:   19 LQEVPIPTIGPRDVLVKVRAASICGTDYHIYTWDPWSAGRVKPPLTIGHELAGEVVAVGREVTACKVGDYVSAETHIVCNRCPRCHMGEYHLCENTKILGV-DTDGAFAEYVAVPEQNIWVNDKDIPFELQSIQEPLGNAVHTALNGDL-TARSVLITGCGPIGIMSVPVAKMAGAEIVMAMDINEY 203          
The following BLAST results are available for this feature:
BLAST of FC869025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
TDH_LEGPH5.309e-2234.04L-threonine 3-dehydrogenase OS=Legionella pneumoph... [more]
TDH_LEGPA5.309e-2234.04L-threonine 3-dehydrogenase OS=Legionella pneumoph... [more]
TDH_CHRVO5.309e-2233.33L-threonine 3-dehydrogenase OS=Chromobacterium vio... [more]
TDH_ALISL5.309e-2233.33L-threonine 3-dehydrogenase OS=Aliivibrio salmonic... [more]
TDH_PYRFU6.933e-2234.88Probable L-threonine 3-dehydrogenase OS=Pyrococcus... [more]
TDH_LEGPC6.933e-2234.04L-threonine 3-dehydrogenase OS=Legionella pneumoph... [more]
TDH_XANOR9.055e-2232.18L-threonine 3-dehydrogenase OS=Xanthomonas oryzae ... [more]
TDH_XANOM9.055e-2232.18L-threonine 3-dehydrogenase OS=Xanthomonas oryzae ... [more]
TDH_BURP89.055e-2234.81L-threonine 3-dehydrogenase OS=Burkholderia phymat... [more]
TDH_SYMTH1.183e-2133.69L-threonine 3-dehydrogenase OS=Symbiobacterium the... [more]

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Properties
Property NameValue
Genbank descriptionC31007G01EF AbioticL1 Citrus clementina cDNA clone C31007G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869025 ID=FC869025; Name=FC869025; organism=Citrus clementina; type=EST; length=744bp
GAAACAGAATCAGAATAAATGTCAGCTTAAAATGTTGTGTACAGAGTGAA
GTCTCTTCTGTGCACTTGTGTTTTTGAAGGGTAAAAAGCAAATATGGGCA
AAGGAGGGATGTCACAAGGAGAAAAGAAGGATGGAGAAGAAGTTAACATG
GCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAACCTTTTGAGCT
TCCTTCTCTGGGACCATATGATGTTTTAGTCGGGATGAAAGCCGTTGGTA
TTTGTGGAAGTGATGTGCATTATCTCAAGACCTTGAGGTGTGTCGATTTT
GTTGTGAAAGAGCCTATGGTGATTGGGCACGAGTGTGCTGGGGTCATAGA
GAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCC
TGGAACCCGGGATCAGCTGCTGGCGATGCGATCACTGCAAAGGAGGTCGA
TACAATTTGTGTCCAGAGATGAAATTTTTTGCAACTCCGCCCGTTCATGG
TTCCCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGC
CGGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTT
GGTCTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAATGTGCT
TATCATGGGAGCAGGGCCCATAGGACTTGTCACAATGCTAGGAGCTCGTG
CTTTTGGAGCTCCTAGAAAATGTCATGTGGATGTGGATGACTAT
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