FC869025

Overview
NameFC869025
Unique NameFC869025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_BURVG (L-threonine 3-dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=tdh PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 61/181 (33.70%), Postives = 93/181 (51.38%), Query Frame = 1 
Query:  202 PSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            P +G  DVL+ ++   ICG+D+H  K        +  PM +GHE  G I ++G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +  PA   FK+P  +S +  ++ +P     H     N+  E +VLI GAGPIG++ +  A+  GA      D++DY
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDINDY 199
[Close]
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_BURTA (L-threonine 3-dehydrogenase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=tdh PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 1 
Query:  202 PSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            P +G  DVL+ ++   ICG+D+H  K        +  PM +GHE  G I ++G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA      D++DY
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDY 199
[Close]
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_BURS3 (L-threonine 3-dehydrogenase OS=Burkholderia sp. (strain 383) GN=tdh PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 61/181 (33.70%), Postives = 93/181 (51.38%), Query Frame = 1 
Query:  202 PSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            P +G  DVL+ ++   ICG+D+H  K        +  PM +GHE  G I ++G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +  PA   FK+P  +S +  ++ +P     H     N+  E +VLI GAGPIG++ +  A+  GA      D++DY
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDINDY 199
[Close]
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_BURPS (L-threonine 3-dehydrogenase OS=Burkholderia pseudomallei GN=tdh PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 1 
Query:  202 PSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            P +G  DVL+ ++   ICG+D+H  K        +  PM +GHE  G I ++G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA      D++DY
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDY 199
[Close]
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_BURP6 (L-threonine 3-dehydrogenase OS=Burkholderia pseudomallei (strain 668) GN=tdh PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 1 
Query:  202 PSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            P +G  DVL+ ++   ICG+D+H  K        +  PM +GHE  G I ++G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA      D++DY
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDY 199
[Close]
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_BURP1 (L-threonine 3-dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=tdh PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 1 
Query:  202 PSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            P +G  DVL+ ++   ICG+D+H  K        +  PM +GHE  G I ++G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA      D++DY
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDY 199
[Close]
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_BURP0 (L-threonine 3-dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=tdh PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 1 
Query:  202 PSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            P +G  DVL+ ++   ICG+D+H  K        +  PM +GHE  G I ++G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA      D++DY
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDY 199
[Close]
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_BURMS (L-threonine 3-dehydrogenase OS=Burkholderia mallei (strain SAVP1) GN=tdh PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 1 
Query:  202 PSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            P +G  DVL+ ++   ICG+D+H  K        +  PM +GHE  G I ++G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA      D++DY
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDY 199
[Close]
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_BURMA (L-threonine 3-dehydrogenase OS=Burkholderia mallei GN=tdh PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 1 
Query:  202 PSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            P +G  DVL+ ++   ICG+D+H  K        +  PM +GHE  G I ++G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA      D++DY
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDY 199
[Close]
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: TDH_BURM9 (L-threonine 3-dehydrogenase OS=Burkholderia mallei (strain NCTC 10229) GN=tdh PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 1 
Query:  202 PSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            P +G  DVL+ ++   ICG+D+H  K        +  PM +GHE  G I ++G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA      D++DY
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDY 199
The following BLAST results are available for this feature:
BLAST of FC869025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
TDH_BURVG1.183e-2133.70L-threonine 3-dehydrogenase OS=Burkholderia vietna... [more]
TDH_BURTA1.183e-2134.25L-threonine 3-dehydrogenase OS=Burkholderia thaila... [more]
TDH_BURS31.183e-2133.70L-threonine 3-dehydrogenase OS=Burkholderia sp. (s... [more]
TDH_BURPS1.183e-2134.25L-threonine 3-dehydrogenase OS=Burkholderia pseudo... [more]
TDH_BURP61.183e-2134.25L-threonine 3-dehydrogenase OS=Burkholderia pseudo... [more]
TDH_BURP11.183e-2134.25L-threonine 3-dehydrogenase OS=Burkholderia pseudo... [more]
TDH_BURP01.183e-2134.25L-threonine 3-dehydrogenase OS=Burkholderia pseudo... [more]
TDH_BURMS1.183e-2134.25L-threonine 3-dehydrogenase OS=Burkholderia mallei... [more]
TDH_BURMA1.183e-2134.25L-threonine 3-dehydrogenase OS=Burkholderia mallei... [more]
TDH_BURM91.183e-2134.25L-threonine 3-dehydrogenase OS=Burkholderia mallei... [more]

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Properties
Property NameValue
Genbank descriptionC31007G01EF AbioticL1 Citrus clementina cDNA clone C31007G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869025 ID=FC869025; Name=FC869025; organism=Citrus clementina; type=EST; length=744bp
GAAACAGAATCAGAATAAATGTCAGCTTAAAATGTTGTGTACAGAGTGAA
GTCTCTTCTGTGCACTTGTGTTTTTGAAGGGTAAAAAGCAAATATGGGCA
AAGGAGGGATGTCACAAGGAGAAAAGAAGGATGGAGAAGAAGTTAACATG
GCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAACCTTTTGAGCT
TCCTTCTCTGGGACCATATGATGTTTTAGTCGGGATGAAAGCCGTTGGTA
TTTGTGGAAGTGATGTGCATTATCTCAAGACCTTGAGGTGTGTCGATTTT
GTTGTGAAAGAGCCTATGGTGATTGGGCACGAGTGTGCTGGGGTCATAGA
GAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCC
TGGAACCCGGGATCAGCTGCTGGCGATGCGATCACTGCAAAGGAGGTCGA
TACAATTTGTGTCCAGAGATGAAATTTTTTGCAACTCCGCCCGTTCATGG
TTCCCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGC
CGGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTT
GGTCTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAATGTGCT
TATCATGGGAGCAGGGCCCATAGGACTTGTCACAATGCTAGGAGCTCGTG
CTTTTGGAGCTCCTAGAAAATGTCATGTGGATGTGGATGACTAT
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