FC869025

Overview
NameFC869025
Unique NameFC869025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: YDJL_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjL OS=Escherichia coli (strain K12) GN=ydjL PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.813e-12
Identity = 53/182 (29.12%), Postives = 87/182 (47.80%), Query Frame = 1
Query:  202 PSLGPYDVLVGMKAVGICGSDV-HYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFA--TPPVHGSLANQVVHPADL-------CFKLPDNVSLEEGAMCEPLSVGLHA-CRRANIGPETNVLIMGAGPIGLVTMLGARAFGA 711
            P  GP DV++ +KA  ICG+D+ HY       +F      + GHE AG I +VG +VK    G RV  +  G  C  C  C+ G +  C E            G  +   + P ++        +++PD V  E+ A+ +P+     +  +++   P  +V+++G GP+GL ++  AR  GA
Sbjct:   22 PMCGPEDVVIEIKAAAICGADMKHYNVDSGSDEF----NSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPICNAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGA 199          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: FADH_PSEAE (Glutathione-independent formaldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=fdhA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.980e-12
Identity = 52/181 (28.73%), Postives = 82/181 (45.30%), Query Frame = 1
Query:  217 YDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL---------ANQVVHP-ADL-CFKLPDNVSLEE-----GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA 711
            + V++ + +  ICGSD H ++          E +V+GHE  G + ++G  V+T+  GD V++   ++C  C  CK     +C  +        +G +         A  V+ P AD    KLP+  +  E       + + L  G H    A +GP + V I GAGP+GL     AR  GA
Sbjct:   35 HGVILRVVSTNICGSDQHMVRGRT----TAPEGLVLGHEITGEVVEIGRGVETMKIGDLVSVPFNVACGHCRTCKEQHTGVCLTVNPARAGGAYGYVDMGGWVGGQAEYVLVPYADFNLLKLPNREAAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASARLLGA 211          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: DOIAD_MICEC (2-deoxy-scyllo-inosamine dehydrogenase OS=Micromonospora echinospora GN=gacH PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.980e-12
Identity = 54/170 (31.76%), Postives = 78/170 (45.88%), Query Frame = 1
Query:  202 PSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA 711
            P   P   +V +    +CGSD   L   R      + P+V GHE AGV++      ++ V G  V  +  + C  C  C+ G   +C  +       V G  A  V  P    + LP+ + L   +  EPL+V LHA  R N+ P   V ++GAG IG + +  ARA GA
Sbjct:   24 PEAPPGWAVVKVHYCCLCGSD---LWLYRGKWHGNRYPIVPGHEWAGVVDSAPEGYESWV-GRPVTGDLIVGCQGCGPCRDGLPVMCENLIEIGFT-VDGGCAGYVAVPITNLYLLPEGMDLAAASQTEPLAVALHAVDRINLRPAERVAVLGAGGIGQLILQSARATGA 188          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: DOIAD_STRSD (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces sp. (strain ATCC 17920 / DSM 40477 / NCIB 11028) GN=tobE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.504e-12
Identity = 54/171 (31.58%), Postives = 76/171 (44.44%), Query Frame = 1
Query:  196 ELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFG 708
            E+P   P + L+ +    ICGSD   L   R V      P+V GHE +G + +V      LV  D V  +   +C  C  C  G   LC  ++        G+ A  +  P      LP+ +SL      EP++V LHA     + P   V ++GAG IGL+ M  AR  G
Sbjct:   18 EVPVPAPGEALIHLGYNSICGSD---LSLYRGVWHGFSYPVVPGHEWSGTVVEVNGPGAELVGRDVVG-DLTCACGSCAACGRGTPVLCENLQELGFTR-DGACAEYMTIPTGNLHVLPEGLSLRAACQVEPVAVALHAVSTVGVEPGERVAVLGAGGIGLMLMQVARQRG 183          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: FADH_PSEPU (Glutathione-independent formaldehyde dehydrogenase OS=Pseudomonas putida GN=fdhA PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 8.495e-12
Identity = 55/212 (25.94%), Postives = 91/212 (42.92%), Query Frame = 1
Query:  145 NMAAWLMGVNTLKIQPFELPSLGP-------YDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL---------ANQVVHP-ADL-CFKLPDNVSLEE-----GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA 711
            N     +G   +++Q  + P +         + V++ + +  ICGSD H ++         +  +V+GHE  G + + G +V+ L  GD V++   ++C RC  CK     +C  +        +G +         A  ++ P AD    KLPD     E       + + L  G H    A +GP + V + GAGP+GL     AR  GA
Sbjct:    4 NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT----TAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYLLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGA 211          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADH5_YEAST (Alcohol dehydrogenase 5 OS=Saccharomyces cerevisiae GN=ADH5 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.109e-11
Identity = 59/182 (32.42%), Postives = 91/182 (50.00%), Query Frame = 1
Query:  178 LKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFG 708
            L+ +   +P   P ++LV +K  G+C SD+H         F +K P++ GHE AGV+ K+GS VK    GD   ++    +C  C++C+ G  + CP +    T   H G+        A     +P NV+L E A  +C  ++V   A +RAN+ P   V I GA G +G + +  A A G
Sbjct:   22 LEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWHG--DWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLD--GTGFTHDGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITV-YKALKRANVIPGQWVTISGACGGLGSLAIQYALAMG 198          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADH5_SACPS (Alcohol dehydrogenase 5 OS=Saccharomyces pastorianus GN=ADH5 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.109e-11
Identity = 59/182 (32.42%), Postives = 91/182 (50.00%), Query Frame = 1
Query:  178 LKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFG 708
            L+ +   +P   P ++LV +K  G+C SD+H         F +K P++ GHE AGV+ K+GS VK    GD   ++    +C  C++C+ G  + CP +    T   H G+        A     +P NV+L E A  +C  ++V   A +RAN+ P   V I GA G +G + +  A A G
Sbjct:   22 LEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWHG--DWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLD--GTGFTHDGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITV-YKALKRANVIPGQWVTISGACGGLGSLAIQYALAMG 198          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 52/188 (27.66%), Postives = 91/188 (48.40%), Query Frame = 1
Query:  175 TLKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEM------KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA 711
            TL    F   + G  DV   +   GIC SD+HY+K     + V   P + GHE  GV+ +VG++V+    GD+V +   + SC  C+ C+    N CP+M       ++     +G  ++ +V       ++PDN++L+  A  +C  ++V           P  ++ ++G G +G + +   +AFGA
Sbjct:   25 TLSPLKFSRRATGEQDVTFKVLYCGICHSDLHYIKN-EWGNAVY--PAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMILTYGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKPGLHIGVVGLGGLGHMAVKFGKAFGA 209          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADH1_ENTHI (NADP-dependent alcohol dehydrogenase OS=Entamoeba histolytica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 57/198 (28.79%), Postives = 89/198 (44.95%), Query Frame = 1
Query:  160 LMGVNTLKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGG------------RYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPR 717
            ++G+  +     ++P  GP D LV   A+  C SD H +      D   +  M++GHE  G I KVGS VK L  GD+V +      W  +  + G            +++   +  F     V+ + AN  + P D+  K  D V L +      ++ G H    ANI     V ++G GP+GL+++ GA   GA R
Sbjct:    6 MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFSEVFHVNEADANLALLPRDI--KPEDAVMLSD-----MVTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGR 193          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 56/174 (32.18%), Postives = 83/174 (47.70%), Query Frame = 1
Query:  199 LPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFG 708
            +P  GP ++LV ++  G+C +D+H LK        VK P+V GHE AGV+   G  V     GD   L+    SC  C+ CK     LCP     +   V G+     +  A    KLP NV L+  A  +C  ++V     + + + P   V I+GA G +G + +  A+A G
Sbjct:   26 VPKPGPDEILVKVRYSGVCHTDLHALK--GDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNAS-LSGYTVDGTFQQYAIGKATHASKLPKNVPLDAVAPVLCAGITV-YKGLKESGVRPGQTVAIVGAGGGLGSLALQYAKAMG 195          
The following BLAST results are available for this feature:
BLAST of FC869025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
YDJL_ECOLI3.813e-1229.12Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
FADH_PSEAE4.980e-1228.73Glutathione-independent formaldehyde dehydrogenase... [more]
DOIAD_MICEC4.980e-1231.762-deoxy-scyllo-inosamine dehydrogenase OS=Micromon... [more]
DOIAD_STRSD6.504e-1231.582-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
FADH_PSEPU8.495e-1225.94Glutathione-independent formaldehyde dehydrogenase... [more]
ADH5_YEAST1.109e-1132.42Alcohol dehydrogenase 5 OS=Saccharomyces cerevisia... [more]
ADH5_SACPS1.109e-1132.42Alcohol dehydrogenase 5 OS=Saccharomyces pastorian... [more]
MTDH_MESCR1.449e-1127.66Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
ADH1_ENTHI1.449e-1128.79NADP-dependent alcohol dehydrogenase OS=Entamoeba ... [more]
ADH1_ASPFN1.449e-1132.18Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]

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Properties
Property NameValue
Genbank descriptionC31007G01EF AbioticL1 Citrus clementina cDNA clone C31007G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869025 ID=FC869025; Name=FC869025; organism=Citrus clementina; type=EST; length=744bp
GAAACAGAATCAGAATAAATGTCAGCTTAAAATGTTGTGTACAGAGTGAA
GTCTCTTCTGTGCACTTGTGTTTTTGAAGGGTAAAAAGCAAATATGGGCA
AAGGAGGGATGTCACAAGGAGAAAAGAAGGATGGAGAAGAAGTTAACATG
GCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAACCTTTTGAGCT
TCCTTCTCTGGGACCATATGATGTTTTAGTCGGGATGAAAGCCGTTGGTA
TTTGTGGAAGTGATGTGCATTATCTCAAGACCTTGAGGTGTGTCGATTTT
GTTGTGAAAGAGCCTATGGTGATTGGGCACGAGTGTGCTGGGGTCATAGA
GAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCC
TGGAACCCGGGATCAGCTGCTGGCGATGCGATCACTGCAAAGGAGGTCGA
TACAATTTGTGTCCAGAGATGAAATTTTTTGCAACTCCGCCCGTTCATGG
TTCCCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGC
CGGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTT
GGTCTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAATGTGCT
TATCATGGGAGCAGGGCCCATAGGACTTGTCACAATGCTAGGAGCTCGTG
CTTTTGGAGCTCCTAGAAAATGTCATGTGGATGTGGATGACTAT
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