FC869025

Overview
NameFC869025
Unique NameFC869025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADHB_BACSU (Uncharacterized zinc-type alcohol dehydrogenase-like protein adhB OS=Bacillus subtilis GN=adhB PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11
Identity = 57/195 (29.23%), Postives = 90/195 (46.15%), Query Frame = 1
Query:  220 DVLVGMKAVGICGSDVHYLKTLRCVDFV--VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK-------FFA----TPPVHGSLANQVVHP-ADLC-FKLPDNVSLEE-----GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVDDY 744
            D+++ + +  ICGSD+H +       F+  ++E  VIGHE  G++E+VGS V  L  GDRV +   I+C  C  CK    + C +         +F     T    G  A  +  P A+   FK+P+  S EE       + + ++ G  +   A +     V+++G GP+GL         GA R   VD  +Y
Sbjct:   27 DMIIKVTSTAICGSDLHLIH-----GFIPNMQEDYVIGHEPMGIVEEVGSGVTKLKKGDRVIIPFNIACGECFFCKNQLESQCDQSNDNGEMGAYFGYSGQTGGYPGGQAEYLRVPFANFTHFKIPE--SCEEPDEKLSVIADAMTTGFWSVDNAGVKKGDTVIVLGCGPVGLFAQKFCWLKGAKRVIAVDYVNY 214          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11
Identity = 53/178 (29.78%), Postives = 84/178 (47.19%), Query Frame = 1
Query:  205 SLGPYDVLVGMKAVGICGSDVHYLKT-LRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFG 708
            S G  DV++ +   GIC SD+H +K   +   +    P+V GHE AGV+ + G  V     GD+V +   + SC  CD C  G  N CP + F            +G  ++ VV       + P+ + L++GA  +C  ++V           P  +V ++G G +G V +  A+AFG
Sbjct:   27 STGDDDVVIKILYCGICHSDLHSIKNEWKNATY----PLVPGHEIAGVVTEAGKNVTKFKGGDKVGVGCMVNSCHSCDSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFPEAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGLGHVAVKFAKAFG 200          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: CADH1_ORYSJ (Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CAD1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11
Identity = 48/172 (27.91%), Postives = 81/172 (47.09%), Query Frame = 1
Query:  220 DVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFG 708
            DV + +   G+C +DV + + +         P+V GHE AGV+ +VG++VK+   GD V +   + SC  C++C     N C +  F             G  +  +V     CFK+PD   LE+ A  +C  ++V     R     P  ++ ++G G +G + +   +AFG
Sbjct:   36 DVSLRITHCGVCYADVAWTRNILNNSMY---PLVPGHEIAGVVTEVGADVKSFKVGDHVGVGTYVNSCRDCENCNSSLENYCSQHVFTFNGVDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLEKAAPLLCAGITVYSPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFG 204          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11
Identity = 58/222 (26.13%), Postives = 93/222 (41.89%), Query Frame = 1
Query:  154 AWLMGVNTLKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVD 738
            AW  G + L I+  E+      +V + + A  +C +D++     +   F    P+V+GHECAG++E VG  V    PGD+V       C RC  C     NLC +++ F  P +   L                            VV  A+L  ++ D  +LE   +  C   S    A   A + P +   + G G +GL  ++G +  GA R   +D++
Sbjct:   15 AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF----PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDIN 230          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.228e-11
Identity = 52/172 (30.23%), Postives = 81/172 (47.09%), Query Frame = 1
Query:  220 DVLVGMKAVGICGSDVHYLKTLRCVDF-VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPP-----VHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFG 708
            DV + +   G+C SD+H +K     D+     P+V GHE AG++ KVGS V     GDRV +   + SC  C+ C+    + CP+  F    P       G  ++ VV       + PDN+ L+ GA  +C  ++V           P  ++ + G G +G V +   +AFG
Sbjct:   32 DVTLKILYCGVCHSDLHTVKN----DWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNSPYKGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFG 199          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: FDEH_PSEPU (5-exo-alcohol dehydrogenase OS=Pseudomonas putida GN=camD PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.228e-11
Identity = 62/191 (32.46%), Postives = 88/191 (46.07%), Query Frame = 1
Query:  181 KIQPFELPSLGPYD--VLVGMKAVGICGSDVHYLK-TLRCVDFVVKEPMVIGHECAGVIEKVGSEVKT------LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCF-KLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA 711
            +++ +E+P   P     LV +   G+CGSDVH +      + F    P+++GHE  G IEK+G+ V T      +  GD V   P   C RC  C            FF  A  P  GS A+    P  + F +LPD+   E  A   C   +V     R   +G +  V++ GAGP+GL  +L A A GA
Sbjct:   14 RVETWEVPIFDPAPGGALVRVVLGGVCGSDVHIVSGEAGAMPF----PIILGHEGIGRIEKLGTGVTTDYAGVPVKQGDMVYWAPIALCHRCHSCTVLDETPWDNSTFFEHAQKPNWGSYADFACLPNGMAFYRLPDHAQPEALAALGCALPTVLRGYDRCGPVGLDDTVVVQGAGPVGLAAVLVAAASGA 200          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADH_MYCTU (Probable alcohol dehydrogenase adh OS=Mycobacterium tuberculosis GN=adh PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.228e-11
Identity = 58/195 (29.74%), Postives = 86/195 (44.10%), Query Frame = 1
Query:  178 LKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKT---LVPGDRVALEPGISCWRCDHCKGGRYNLC-----PEMKFF----ATPPVHGSLAN-QVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETN----VLIMGAGPIGLVTMLGARAFGA 711
            L ++ + LP +G  D LV ++A G+CG+D           F      V GHE  G I  +G   +    +  GDRVA+E   SC +C +C+GG Y  C      +M  F      P + G  A  Q + P  +  ++  ++S E   +  PL  G+   R     PET     V ++G G  GL     A+  GA
Sbjct:   18 LVVRQYRLPRIGDDDALVRVEACGLCGTDHEQYTGELAGGFA----FVPGHETVGTIAAIGPRAEQRWGVSAGDRVAVEVFQSCRQCANCRGGEYRRCVRHGLADMYGFIPVDREPGLWGGYAEYQYLAPDSMVLRVAGDLSPEVATLFNPLGAGI---RWGVTIPETKPGDVVAVLGPGIRGLCAAAAAKGAGA 205          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 3.228e-11
Identity = 57/212 (26.89%), Postives = 89/212 (41.98%), Query Frame = 1
Query:  184 IQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS----VGL-------HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVD 738
            I+  E+     ++V + M A GIC SD H +        V   P++ GHE AG++E +G  V T+ PGD+V       C +C  CK    NLC  +K  + P                P+H  L           + + D +S+ +     PL     VG         A + A +   +   + G G +GL  ++G +A GA R   VD++
Sbjct:   24 IEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGT----LVAPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDIN 225          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.216e-11
Identity = 52/181 (28.73%), Postives = 83/181 (45.86%), Query Frame = 1
Query:  193 FELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFG 708
            + L + GP DV+V +   GIC SD+  +     +      PMV GHE  GV+ ++GSEVK    G+ V +   + SC  C +C G     C +  +          P  G  A+ +V       ++P+N+ LE+ A  +C  ++V           P     I+G G +G + +  A+AFG
Sbjct:   27 YTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMS---NYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFG 204          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.216e-11
Identity = 52/181 (28.73%), Postives = 83/181 (45.86%), Query Frame = 1
Query:  193 FELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFG 708
            + L + GP DV+V +   GIC SD+  +     +      PMV GHE  GV+ ++GSEVK    G+ V +   + SC  C +C G     C +  +          P  G  A+ +V       ++P+N+ LE+ A  +C  ++V           P     I+G G +G + +  A+AFG
Sbjct:   27 YTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMS---NYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFG 204          
The following BLAST results are available for this feature:
BLAST of FC869025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
ADHB_BACSU1.892e-1129.23Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
CADH5_ORYSJ2.472e-1129.78Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
CADH1_ORYSJ2.472e-1127.91Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza... [more]
ADH4_MOUSE2.472e-1126.13Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
MTDH1_STYHU3.228e-1130.23Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
FDEH_PSEPU3.228e-1132.465-exo-alcohol dehydrogenase OS=Pseudomonas putida ... [more]
ADH_MYCTU3.228e-1129.74Probable alcohol dehydrogenase adh OS=Mycobacteriu... [more]
ADH1S_HORSE3.228e-1126.89Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
CADH7_PICAB4.216e-1128.73Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB4.216e-1128.73Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]

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Properties
Property NameValue
Genbank descriptionC31007G01EF AbioticL1 Citrus clementina cDNA clone C31007G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869025 ID=FC869025; Name=FC869025; organism=Citrus clementina; type=EST; length=744bp
GAAACAGAATCAGAATAAATGTCAGCTTAAAATGTTGTGTACAGAGTGAA
GTCTCTTCTGTGCACTTGTGTTTTTGAAGGGTAAAAAGCAAATATGGGCA
AAGGAGGGATGTCACAAGGAGAAAAGAAGGATGGAGAAGAAGTTAACATG
GCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAACCTTTTGAGCT
TCCTTCTCTGGGACCATATGATGTTTTAGTCGGGATGAAAGCCGTTGGTA
TTTGTGGAAGTGATGTGCATTATCTCAAGACCTTGAGGTGTGTCGATTTT
GTTGTGAAAGAGCCTATGGTGATTGGGCACGAGTGTGCTGGGGTCATAGA
GAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCC
TGGAACCCGGGATCAGCTGCTGGCGATGCGATCACTGCAAAGGAGGTCGA
TACAATTTGTGTCCAGAGATGAAATTTTTTGCAACTCCGCCCGTTCATGG
TTCCCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGC
CGGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTT
GGTCTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAATGTGCT
TATCATGGGAGCAGGGCCCATAGGACTTGTCACAATGCTAGGAGCTCGTG
CTTTTGGAGCTCCTAGAAAATGTCATGTGGATGTGGATGACTAT
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