FC869025

Overview
NameFC869025
Unique NameFC869025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.506e-11
Identity = 54/175 (30.86%), Postives = 80/175 (45.71%), Query Frame = 1
Query:  211 GPYDVLVGMKAVGICGSDVHYLKTLRCVDF-VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPP-----VHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFG 708
            G  DV V +   G+C SD+H LK     D+     P+V GHE  GV+ KVG  VK    GD V +   + SC  C++C       CP+  F    P      +G  ++ VV       + PDN+ L+ GA  +C  ++V           P  ++ + G G +G V +   +AFG
Sbjct:   36 GDDDVSVKILYCGVCHSDLHTLKN----DWGFTTYPVVPGHEIVGVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYNSPYKGTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFG 206          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADH_SULAC (NAD-dependent alcohol dehydrogenase OS=Sulfolobus acidocaldarius GN=adh PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.506e-11
Identity = 55/194 (28.35%), Postives = 90/194 (46.39%), Query Frame = 1
Query:  178 LKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTL---RCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP-ADLCFKLPD-NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRKCHVDVDD 741
            L+++  ++P +G   VLV +   G+C +D+         R        P+VIGHE AG + ++G  V+     D+V ++P I    C +CK G    C   K+     V+G     V+ P     FKL + + S      C  ++    A R AN+ P  +V+I+GA G +G + +  A+A        VDV +
Sbjct:   13 LRLEDMDVPKVGVGQVLVKVDYAGVCHTDLSVRSGAIFNRISSSKPTLPLVIGHEIAGEVVELGGNVEGFKKSDKVLIDPWIGDGSCHYCKIGEDQYCDNPKWLGI-NVNGGYGEYVLVPDYRYMFKLRNLSTSTASPLACSGVT-AYRALRLANLDPSKSVMIIGAGGGLGSIAVQIAKAIHGSFIIGVDVSE 204          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADH7_YEAST (NADP-dependent alcohol dehydrogenase 7 OS=Saccharomyces cerevisiae GN=ADH7 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.506e-11
Identity = 59/189 (31.22%), Postives = 88/189 (46.56%), Query Frame = 1
Query:  181 KIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDF-VVKEPMVIGHECAGVIEKVGSEVKTLVP-GDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFA--TP-----PVHGSLANQVVHPADLCFKLPDNV--SLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA 711
            K+  F+    G +DV V ++A GICGSD H    +   ++  V E  ++GHE  G + KVGS+  T V  GDRV +    ++C+ C+ CK      C         TP        G  A+ V        ++P+N+   L    +C  ++V      R   GP   V I+G G IG + +L A+A GA
Sbjct:   22 KLVSFDPKPFGDHDVDVEIEACGICGSDFH----IAVGNWGPVPENQILGHEIIGRVVKVGSKCHTGVKIGDRVGVGAQALACFECERCKSDNEQYCTNDHVLTMWTPYKDGYISQGGFASHVRLHEHFAIQIPENIPSPLAAPLLCGGITV-FSPLLRNGCGPGKRVGIVGIGGIGHMGILLAKAMGA 205          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.506e-11
Identity = 56/178 (31.46%), Postives = 86/178 (48.31%), Query Frame = 1
Query:  199 LPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVV--KEPMVIGHECAGVIEKVGSEVK--TLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFG 708
            +P  GP ++LV M+  G+C +D+H +K     D+ +  K P++ GHE AGV+   G  VK      GDR  ++    SC  C+ C      LCP     +   V G+     +  A L  K+PDNV L+  A  +C  ++V     + +   P   V I+GA G +G +    A+A G
Sbjct:   26 VPKPGPDEILVKMRYSGVCHTDLHAMKG----DWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHAS-LSGYTVDGTFQQYTIGKAALASKIPDNVPLDAAAPILCAGITV-YKGLKESGARPGQTVAIVGAGGGLGSLAQQYAKAMG 197          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.191e-11
Identity = 56/184 (30.43%), Postives = 85/184 (46.20%), Query Frame = 1
Query:  178 LKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HACRRANIGPETNVLIMGAGPIGLVTMLGARAFG 708
            L I+   +P  GP  VL+  +A G+C +D+H  K     D+ V+   P + GHE  G + K+G+EV  L  GDRV + P +  +C  C  C+ G   LC   +      V G+ A   +   D   +LP    LE G     L  G+      +   + P   VL+ G G +G + +  A+A G
Sbjct:   15 LVIEEVPVPQPGPGQVLIKYEATGVCHTDLHAAKG----DWPVRPNPPFIPGHEGVGYVAKLGAEVTRLKEGDRVGV-PWLHTACGCCTPCRTGWETLCGSQQNTGY-SVDGTFAQYGLADPDFVGRLP--ARLEFGPAAPVLCAGVTVYKGLKETEVRPGEWVLVSGIGGLGHMAVQYAKAMG 190          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11
Identity = 51/181 (28.18%), Postives = 83/181 (45.86%), Query Frame = 1
Query:  193 FELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFG 708
            + L   GP DV+V +   GIC SD+  ++    +      PMV GHE  G++ ++GSEVK    G+ V +   + SC  C +C       C +  +          P  G  A+ +V       ++P+N+ LE+ A  +C  ++V       A   P     I+G G +G + +  A+AFG
Sbjct:   27 YNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHY---PMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGVGHLGVKIAKAFG 204          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11
Identity = 51/181 (28.18%), Postives = 83/181 (45.86%), Query Frame = 1
Query:  193 FELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFG 708
            + L   GP DV+V +   GIC SD+  ++    +      PMV GHE  G++ ++GSEVK    G+ V +   + SC  C +C       C +  +          P  G  A+ +V       ++P+N+ LE+ A  +C  ++V       A   P     I+G G +G + +  A+AFG
Sbjct:   27 YNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHY---PMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGVGHMGVKIAKAFG 204          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11
Identity = 51/190 (26.84%), Postives = 87/190 (45.79%), Query Frame = 1
Query:  172 NTLKIQPFELP--SLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPE------MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFG 708
            N+  + PF       G  DV   +   GIC SD+H +K    +      P+V GHE  GV+ +VG++V     G++V +   + SC  CD C  G  N CP+        ++     +G  ++ +V       ++PDN+ L+  A  +C  ++V           P  ++ ++G G +G V +  A+A G
Sbjct:   17 NSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTY---PLVPGHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYDNTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVVGLGGLGHVGVKFAKAMG 203          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADH4_RAT (Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Adh4 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11
Identity = 54/214 (25.23%), Postives = 90/214 (42.06%), Query Frame = 1
Query:  178 LKIQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVD 738
            L I+  E+     ++V + + A  +C +D++     +   F    P+V+GHECAG++E VG  V    PGD+V       C +C  C     NLC +++ F  P +   L                            VV  A+L  ++ D  +LE   +  C   S    A   A + P +   + G G +GL  ++G +  GA R   +D++
Sbjct:   22 LCIEEIEVSPPKAHEVRIKVIATCVCPTDINATNPKKKALF----PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKKCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTSKERSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFTSGYGAAINTAKVTPGSACAVFGLGCVGLSAVIGCKIAGASRIIAIDIN 230          
BLAST of FC869025 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11
Identity = 52/212 (24.53%), Postives = 88/212 (41.51%), Query Frame = 1
Query:  184 IQPFELPSLGPYDVLVGMKAVGICGSDVHYLKTLRCVDFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRKCHVDVD 738
            I+  E+     ++V + M A G+C SD H +            P V+GHE AG++E +G  V  + PGD+V       C +C  CK    NLC + K    P                P+H  ++          + + D++++ +     PL          S G   A + A + P +   + G G +GL  ++G +  GA +   VD++
Sbjct:   24 IEDIEVAPPKAHEVRIKMVATGVCRSDDHAVSG----SLFTPLPAVLGHEGAGIVESIGEGVTCVKPGDKVIPLFSPQCGKCRICKHPESNLCCQTKNLTQPKGALLDGTSRFSCRGKPIHHFISTSTFSQ----YTVVDDIAVAKIDAAAPLDKVCLIGCGFSTGYGSAVQVAKVTPGSTCAVFGLGGVGLSVVIGCKTAGAAKIIAVDIN 227          
The following BLAST results are available for this feature:
BLAST of FC869025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
MTDH_MEDSA5.506e-1130.86Probable mannitol dehydrogenase OS=Medicago sativa... [more]
ADH_SULAC5.506e-1128.35NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH7_YEAST5.506e-1131.22NADP-dependent alcohol dehydrogenase 7 OS=Saccharo... [more]
ADH3_EMENI5.506e-1131.46Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
ADHA_RHIME7.191e-1130.43Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
CADH_PINTA9.392e-1128.18Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]
CADH_PINRA9.392e-1128.18Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH8_ARATH9.392e-1126.84Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
ADH4_RAT9.392e-1125.23Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Ad... [more]
ADH1_RAT9.392e-1124.53Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]

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Properties
Property NameValue
Genbank descriptionC31007G01EF AbioticL1 Citrus clementina cDNA clone C31007G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869025 ID=FC869025; Name=FC869025; organism=Citrus clementina; type=EST; length=744bp
GAAACAGAATCAGAATAAATGTCAGCTTAAAATGTTGTGTACAGAGTGAA
GTCTCTTCTGTGCACTTGTGTTTTTGAAGGGTAAAAAGCAAATATGGGCA
AAGGAGGGATGTCACAAGGAGAAAAGAAGGATGGAGAAGAAGTTAACATG
GCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAACCTTTTGAGCT
TCCTTCTCTGGGACCATATGATGTTTTAGTCGGGATGAAAGCCGTTGGTA
TTTGTGGAAGTGATGTGCATTATCTCAAGACCTTGAGGTGTGTCGATTTT
GTTGTGAAAGAGCCTATGGTGATTGGGCACGAGTGTGCTGGGGTCATAGA
GAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCC
TGGAACCCGGGATCAGCTGCTGGCGATGCGATCACTGCAAAGGAGGTCGA
TACAATTTGTGTCCAGAGATGAAATTTTTTGCAACTCCGCCCGTTCATGG
TTCCCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGC
CGGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTT
GGTCTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAATGTGCT
TATCATGGGAGCAGGGCCCATAGGACTTGTCACAATGCTAGGAGCTCGTG
CTTTTGGAGCTCCTAGAAAATGTCATGTGGATGTGGATGACTAT
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