FC869034

Overview
NameFC869034
Unique NameFC869034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13179 contig Ccv1_Contig13179:97..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23
Identity = 65/163 (39.88%), Postives = 85/163 (52.15%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 626
            E  K  F+RAV+AEF+A            +G+K     N    Q      + ++ AFG  I  L      ISG H+NPAVT GL L  ++S+ RAL+Y++AQC+GAI     +     S       G N+LADG N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGN-SLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 161          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23
Identity = 65/163 (39.88%), Postives = 85/163 (52.15%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 626
            E  K  F+RAV+AEF+A            +G+K     N    Q      + ++ AFG  I  L      ISG H+NPAVT GL L  ++S+ RAL+Y++AQC+GAI     +     S       G N+LADG N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGN-SLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 161          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 6.364e-22
Identity = 62/163 (38.04%), Postives = 87/163 (53.37%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 626
            E+ K  F+RAV+AEF+A            +G+    + N    Q      + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G N+LA G N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDN-SLGRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 161          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21
Identity = 62/163 (38.04%), Postives = 86/163 (52.76%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 626
            E+ K  F+RAV+AEF+A            +G+    + N    Q      + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S       G N+LA G N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLEN-SLGRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 161          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21
Identity = 64/164 (39.02%), Postives = 86/164 (52.44%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 626
            E  K  F+RAV+AEF+A            +G+     P  N    G     + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G NELA G N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFVFISIGSALGFNY---PVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDN-SLGRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21
Identity = 64/164 (39.02%), Postives = 86/164 (52.44%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 626
            E  K  F+RAV+AEF+A            +G+      N  T   G V   + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G N LA G N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTT---GAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21
Identity = 64/164 (39.02%), Postives = 86/164 (52.44%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 626
            E  K  F+RAV+AEF+A            +G+      N  T   G V   + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G N LA G N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTT---GAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.674e-20
Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 626
            E  K +F+RAVIAEF+A            +G+    +   N        I+ ++ AFG  I  +      +SG H+NPAVT G  L  ++S+++A++Y++AQCLGA+     +        N    G N L+ G + G GLG EI+ TF LV  V + TD +R
Sbjct:    4 EFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENN-SLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRR 165          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 3.492e-20
Identity = 62/164 (37.80%), Postives = 85/164 (51.83%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 626
            E  K  F+RAV+AEF+A            +G++    P  N    G     + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S       G N LA G + G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKIFWRAVVAEFLAMTLFIFISIGSALGFQY---PVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGN-SLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRR 163          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18
Identity = 59/170 (34.71%), Postives = 90/170 (52.94%), Query Frame = 3
Query:  123 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 629
            ++ F+ +   +F++AV AEF+A            I +    +P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ +++ Y+ AQCLGAI G G +  +  +  N  GG G   +      G GL  E+I TF LV+T+F++ D KR+
Sbjct:   26 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 186          
The following BLAST results are available for this feature:
BLAST of FC869034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
AQP1_HUMAN7.518e-2339.88Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB9.818e-2339.88Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE6.364e-2238.04Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_RAT1.086e-2138.04Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_CANFA1.418e-2139.02Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN5.388e-2139.02Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP9.190e-2139.02Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQPA_RANES2.674e-2034.36Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP1_PIG3.492e-2037.80Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP4_NOTAL4.269e-1834.71Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31007G10EF AbioticL1 Citrus clementina cDNA clone C31007G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869034 ID=FC869034; Name=FC869034; organism=Citrus clementina; type=EST; length=714bp
AGAGTTTAATTACAAAACATCCTAAAAGGGAAAAAATGGGGAAGGATGTT
GAAGTTGCTGAGCAGCAAGGCGGCGGCGACGAGTTCTCAGCCAAGGACTA
CCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAAGT
GGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGTTT
CTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGATCC
CAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGCTT
GGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTATT
TCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGGCG
CAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTTGG
GTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACTAC
AACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAGGG
CACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACTG
TTTTCTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCCCATGTTCCG
GTCTTGGCACCACTCCCATTGGGGTTGCTGTGTTCATGGTTCACTTGGCC
ACCATCCCATCACG
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