FC869034

Overview
NameFC869034
Unique NameFC869034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13179 contig Ccv1_Contig13179:97..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16
Identity = 60/162 (37.04%), Postives = 85/162 (52.47%), Query Frame = 3
Query:  162 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTG-LGA---EIIGTFVLVYTVF-SATDPKRSA 632
            +A +AEFI+            + +   T+    T    G+    +A AFG  +F+ V   A ISGGH+NPAVTFG F+G  ++L+R +LY +AQ LG++  C  +K           GG    A G + G G L A   EI+ TF LVYTV+ +A DPK  +
Sbjct:   21 KAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPS--GLVAAAVAHAFG--LFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFAT--------GGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGS 170          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.815e-16
Identity = 56/159 (35.22%), Postives = 82/159 (51.57%), Query Frame = 3
Query:  162 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 632
            +A +AEFIA            I Y   T D  L+       G++ +A A    +F+ V   A +SGGH+NPAVT GL +G  ++++  L Y +AQCLG+   C  +K       N      + +A G +   G+  EII TF LVYTV+ +A DPK+ +
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDP-----AGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVT----NGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS 168          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.815e-16
Identity = 57/167 (34.13%), Postives = 82/167 (49.10%), Query Frame = 3
Query:  135 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 632
            +E+   +F +AV AEF+A            + + S               IL IA AFG  I  L      +SGGHINPA+T  L +G ++SL+RA+ Y+VAQ +GAI G G +        N  G    N L +    G  +  E+I TF L   +FS+TD +R++
Sbjct:    3 KEVCSLAFLKAVFAEFLATLIFVFFGLASALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPG--NARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS 156          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.163e-15
Identity = 55/167 (32.93%), Postives = 84/167 (50.30%), Query Frame = 3
Query:  135 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 632
            +E+   +F++AV AEF+A            + + S               IL I+ AFG  I  L      +SGGHINPA+T  L +G ++SL+RA+ Y+ AQ +GAI G G +  +  +  N  G    N L +    G  +  E+I TF L   +FS+TD +R++
Sbjct:    3 KEVCSLAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL--YWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS 156          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.163e-15
Identity = 55/167 (32.93%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  135 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 632
            +E+   +F++AV AEF+A            + + S               IL I+ AFG  I  L      +SGGHINPA+T  L +G ++SL+RA+ Y+ AQ +GAI G G +  +  +  N  G    N L++    G  +  E+I TF L   +FS+TD +R++
Sbjct:    3 KEVCSVAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGIL--YWLAPGNARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS 156          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 56/158 (35.44%), Postives = 77/158 (48.73%), Query Frame = 3
Query:  162 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 632
            +A +AEFIA            I Y   T            G++ IA A    +F+ V   A ISGGH+NPAVTFGL +G  ++++  +LY VAQ LGA   C     F   Y             G ++  G+  EI+ TF LVYTV+ +A DPK+ +
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGA----LDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVAC-----FLLQYVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGS 167          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 53/156 (33.97%), Postives = 77/156 (49.36%), Query Frame = 3
Query:  162 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKR 626
            RA  AEF +            + Y   T     T      G++  + +    +F+ V   A +SGGH+NPAVTFG F+G  ++L+RA+LY +AQ LGA+  C  +K             A  L+ G      +  EI+ TF LVYTV+ +A DPK+
Sbjct:   21 RAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATP----AGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGGMET----AAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK 168          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 54/166 (32.53%), Postives = 82/166 (49.40%), Query Frame = 3
Query:  135 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 632
            +E+   +F +AV AEF+A            + + S               +L I+ AFG  I  +      +SGGH+NPA+T  L +G ++SL+RA+ Y+VAQ +GAI G   +      Y  R     N L +    G  + AE+I TF L   VFS+TD +R++
Sbjct:    3 KEVCSAAFLKAVFAEFLATLIFVFFGLGSALKWPSAMP-----------SVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL-APYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS 156          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15
Identity = 58/160 (36.25%), Postives = 80/160 (50.00%), Query Frame = 3
Query:  162 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVK--AFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 632
            +A +AEFIA            I Y   T    N       G++ IA A    +F+ V   A ISGGH+NPAVTFGL +G  ++++  L Y +AQ LGA   C  +K     K+       G +EL        G+  EI+ TF LVYTV+ +A DPK+ +
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLT----NGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGVAGISEL-------EGVVMEIVITFALVYTVYATAADPKKGS 167          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15
Identity = 55/167 (32.93%), Postives = 83/167 (49.70%), Query Frame = 3
Query:  135 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 632
            +E+   +F +AV AEF+A            + + S               IL IA AFG  I  L      +SGGHINPA+T  L +G ++SL+RA  Y+ AQ +GAI G G +  +  +  N  G    N L +   +G  +  E+I TF L   +F++TD +R++
Sbjct:    3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL--YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS 156          
The following BLAST results are available for this feature:
BLAST of FC869034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
TIP11_ARATH1.373e-1637.04Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP_ANTMA6.815e-1635.22Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
AQP5_PIG6.815e-1634.13Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP5_RAT1.163e-1532.93Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP5_MOUSE1.163e-1532.93Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
TIP23_MAIZE1.983e-1535.44Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP13_ARATH1.983e-1533.97Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
AQP5_SHEEP1.983e-1532.53Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
TIP21_ORYSJ3.382e-1536.25Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
AQP5_HUMAN3.382e-1532.93Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31007G10EF AbioticL1 Citrus clementina cDNA clone C31007G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869034 ID=FC869034; Name=FC869034; organism=Citrus clementina; type=EST; length=714bp
AGAGTTTAATTACAAAACATCCTAAAAGGGAAAAAATGGGGAAGGATGTT
GAAGTTGCTGAGCAGCAAGGCGGCGGCGACGAGTTCTCAGCCAAGGACTA
CCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAAGT
GGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGTTT
CTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGATCC
CAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGCTT
GGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTATT
TCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGGCG
CAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTTGG
GTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACTAC
AACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAGGG
CACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACTG
TTTTCTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCCCATGTTCCG
GTCTTGGCACCACTCCCATTGGGGTTGCTGTGTTCATGGTTCACTTGGCC
ACCATCCCATCACG
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