FC869034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.418e-15 Identity = 56/161 (34.78%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 162 RAVIAEFIAXXXXXXXXXXXXIGYKS---QTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKRSA 632 RA +AEF++ + T + T+ GG+ ++ +A A +F V +SGGH+NPAVTF +G ++S+IRA+ Y VAQ +GAI C ++ N +A G ++ GL EII TF LVY V+S A DPKR + Sbjct: 24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALA--LFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLAT----NGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS 178
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.418e-15 Identity = 59/161 (36.65%), Postives = 81/161 (50.31%), Query Frame = 3 Query: 162 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC---GFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 632 +A +AEFIA I Y T N G++ IA A +F+ V A ISGGH+NPAVTFGL +G ++++ + Y VAQ LGA C GFV K+ G +EL G+ E++ TF LVYTV+ +A DPK+ + Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYGQLT----NGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFV-THGKAIPTHAVAGISEL-------EGVVFEVVITFALVYTVYATAADPKKGS 167
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.769e-15 Identity = 52/125 (41.60%), Postives = 69/125 (55.20%), Query Frame = 3 Query: 261 TDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSA-TDPKRSA 632 T+ GG+ ++ +A AF +F V +SGGH+NPAVTFG +G +V+ IRA+ Y +AQ LGAI C ++ N LA G GL EII TF LVY V+S DPKR + Sbjct: 60 TNTPGGLILVALAHAFA--LFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTT----NGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS 178
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.769e-15 Identity = 56/159 (35.22%), Postives = 80/159 (50.31%), Query Frame = 3 Query: 162 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 632 +A +AEFIA I Y T D L+ G++ +A A +F+ V A ISGGH+NPAVT GL +G ++++ Y +AQ LG+ C +K N + +A G N G+ EII TF LVYTV+ +A DPK+ + Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDP-----AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVT----NGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS 168
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15 Identity = 56/159 (35.22%), Postives = 80/159 (50.31%), Query Frame = 3 Query: 162 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 632 +A +AEFIA I Y T D L+ G++ +A A +F+ V A ISGGH+NPAVT GL +G ++++ Y +AQ LG+ C +K N + +A G N G+ EII TF LVYTV+ +A DPK+ + Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDP-----AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVT----NGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS 168
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15 Identity = 54/156 (34.62%), Postives = 81/156 (51.92%), Query Frame = 3 Query: 162 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKR 626 +A +AEFI+ I Y T+ T G++ + A +F+ V A ISGGH+NPAV FG F+G ++L+R ++Y++AQ LG+I + S +G L++G G L EI+ TF LVYTV+ +A DPK+ Sbjct: 21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATP----AGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK 166
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15 Identity = 57/160 (35.62%), Postives = 79/160 (49.38%), Query Frame = 3 Query: 162 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANEL--ADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 632 +A +AEFI+ + + T T G++ A A +F+ V A ISGGH+NPAVTFG F+G ++L R LLY +AQ LG+ C F+ F GG A G + L EI+ TF LVYTV+ +A DPK+ + Sbjct: 21 KAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTP----AGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVAC-FLLRFST------GGLATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS 169
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 57/163 (34.97%), Postives = 80/163 (49.08%), Query Frame = 3 Query: 162 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-----DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 632 +A +AEFI+ I Y T DP G++ +A G +F+ V A ISGGH+NPAVTFGL LG +++++ + Y +AQ LGAI G V+ +G G G+ EII TF LVYTV+ +A DPK+ + Sbjct: 20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDP---------AGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGS 167
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 58/160 (36.25%), Postives = 78/160 (48.75%), Query Frame = 3 Query: 162 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANEL--ADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 632 +A AEFI+ + + T T G++ A A +F+ V A ISGGH+NPAVTFG F+G ++L R LLY VAQ LG+ C F+ F GG A G + L EI+ TF LVYTV+ +A DPK+ + Sbjct: 21 KAAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTP----AGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVAC-FLLRFST------GGQATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS 169
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 56/166 (33.73%), Postives = 79/166 (47.59%), Query Frame = 3 Query: 138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 635 EL SF+RA+ AEF A +G + P G + +L +A AFG + LV ISG H+NPAVTF +G ++SL+RA+ YM AQ LGA+ G + + + R N L G + G EI T V +F+ D +R+ R Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAV-RGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGR 156 The following BLAST results are available for this feature:
BLAST of FC869034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869034 ID=FC869034; Name=FC869034; organism=Citrus clementina; type=EST; length=714bpback to top |