FC869048

Overview
NameFC869048
Unique NameFC869048
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_LACSS (S-adenosylmethionine synthetase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=metK PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.922e-59
Identity = 122/215 (56.74%), Postives = 152/215 (70.70%), Query Frame = 2
Query:   86 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            E  LFTSESV+EGHPDK+ DQISDAILDA LEQDP ++VACET   T LV+V GEI+T A V+ +K+VR+T + IG+     G D DNC V+V +++QSPDIAQGV   L  R       ++IGAGDQG MFG+A D+TPE MPL   L+ +L  K+ E+RK+G   +LRPD K QVTVE Y+EN    P RV TV+ISTQHDE VT + I  D+
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDAMLEQDPQARVACETTVTTGLVLVVGEISTTAYVDIQKVVRETIKKIGYRDGQYGFDGDNCAVIVALDEQSPDIAQGVDDSLESREKDEDPLDKIGAGDQGLMFGFAVDQTPELMPLPIALSHRLMRKVAELRKSGQLAYLRPDAKAQVTVE-YDENEQ--PKRVDTVVISTQHDEDVTLETIQKDM 214          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_LACBA (S-adenosylmethionine synthetase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=metK PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.816e-59
Identity = 121/215 (56.28%), Postives = 148/215 (68.84%), Query Frame = 2
Query:   86 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            E  LFTSESV+EGHPDK+ DQISDAILDA L QDPDS+VACET   T LV+VFGEI+TKA V+ +K+VR T + IG+     G D DNC VLV I++QSPDIAQGV   L  R       ++IGAGDQG MFGYA +ETPE MPL   L+  L  ++  +RK     +LRPD K +VTVEY + +    P+RV TV++STQHD  VT D I  D+
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDALLAQDPDSRVACETSVTTGLVLVFGEISTKAYVDIQKVVRQTIKEIGYTDGQYGFDGDNCAVLVAIDEQSPDIAQGVDDSLETREGDADPLDQIGAGDQGLMFGYAVNETPELMPLPIELSHALMRRIAMLRKQAVLDYLRPDAKAEVTVEYDDND---QPLRVDTVVLSTQHDPDVTLDRIRQDV 214          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_CLOBB (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=metK PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.816e-59
Identity = 118/212 (55.66%), Postives = 148/212 (69.81%), Query Frame = 2
Query:   95 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            LFTSESV EGHPDK+CDQISDAILDA L +DP+++VACETCT T LVMV GEI+T   V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV   L  +       E +GAGDQG MFG+AT+ET  +MPL   +A +L  +LTEVRK+GT  +LRPDGKTQVTVEY N      P R+ T++ISTQH E V+ ++I  D+
Sbjct:    4 LFTSESVTEGHPDKMCDQISDAILDAILTKDPNARVACETCTTTGLVMVMGEISTNCYVDIPKVVRETVREIGYDRAKYGFDCDTCSVMTTIDEQSADIAMGVDEALESKKGQKDEVEAVGAGDQGMMFGFATNETDAYMPLPIYMAHKLSRRLTEVRKDGTLDYLRPDGKTQVTVEYENNK----PKRIDTIVISTQHGEEVSLEKIEKDI 211          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.984e-59
Identity = 121/214 (56.54%), Postives = 145/214 (67.76%), Query Frame = 2
Query:   95 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR--------PEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP ++VACE    T LV+V GEITTK  V+  KI RDT R IG+     G DAD C V+  I++QSPDIA GV   L  +         E IGAGDQG MFG+A DETP  MP+   LA +L  +L  VRK G  P+LRPDGKTQVTVEY ++     PVRV TV++STQH   VT+ +I AD+
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILEKDPYARVACEVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTEDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKEGILPYLRPDGKTQVTVEYEDDK----PVRVDTVVVSTQHSPEVTHAQIEADV 213          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_GEOKA (S-adenosylmethionine synthetase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.510e-59
Identity = 121/214 (56.54%), Postives = 147/214 (68.69%), Query Frame = 2
Query:   95 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            LFTSESV EGHPDK+CDQISDAILDA LE+DP+++VACET   T LV+V GEITT   V+  +IVRDT R IG+     G DAD C VL  I++QSPDIA GV   L  R         E IGAGDQG MFG+A +ET E MP+   LA +L  +L EVRK    P+LRPDGKTQVT+E Y+ENG   PVRV T+++S QH   +T ++I  D+
Sbjct:    7 LFTSESVTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPRIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDRALEAREGQMTDEEIEAIGAGDQGLMFGFACNETEELMPMPISLAHRLARRLAEVRKTDVLPYLRPDGKTQVTIE-YDENGK--PVRVDTIVVSAQHHPEITQEQIQRDI 217          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.502e-59
Identity = 119/214 (55.61%), Postives = 145/214 (67.76%), Query Frame = 2
Query:   95 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR--------PEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP ++VACE    T LV+V GEITTK  V+  KI RDT R IG+     G DAD C V+  I++QSPDIA GV   L  +         E IGAGDQG MFG+A DETP  MP+   LA +L  +L  VRK G  P+LRPDGKTQVTVEY ++     P+RV T+++STQH   VT+ +I AD+
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILEKDPYARVACEVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTDDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKGGILPYLRPDGKTQVTVEYEDDR----PIRVDTIVVSTQHSPEVTHAQIEADV 213          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_CLOTE (S-adenosylmethionine synthetase OS=Clostridium tetani GN=metK PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.450e-58
Identity = 115/212 (54.25%), Postives = 147/212 (69.34%), Query Frame = 2
Query:   95 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSK------RPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP+ +VACET   T +V+V GEITT   V+  KIVR+T   IG+     G D+D C VL  I +QSPDIA GV   L        + + IGAGDQG MFGYA +ET E+MP++  +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY +       +R+ T+++STQH   VT ++I  D+
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILERDPNGRVACETSVTTGMVLVTGEITTNCYVDIPKIVRNTIEAIGYTRAKYGFDSDTCAVLTSISEQSPDIAMGVDESLESKQGGMDKEDVIGAGDQGMMFGYANNETSEYMPMAISIAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYEDNKA----IRIDTIVVSTQHGPEVTREQIEKDI 211          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_BACHD (S-adenosylmethionine synthetase OS=Bacillus halodurans GN=metK PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.450e-58
Identity = 121/214 (56.54%), Postives = 150/214 (70.09%), Query Frame = 2
Query:   95 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            LFTSESV EGHPDK+CDQISD+ILD  L++DP+++VACET   T LV+V GEITT   V+  K+VRDT RNIG+     G D++ C VL  I++QSPDIAQGV+  L  R         E IGAGDQG MFGYA +ETPE MPL   L+ +L  +L+E RK    P+LRPDGKTQVTVE Y+EN     VR+ T++ISTQH   VT ++I +DL
Sbjct:    9 LFTSESVTEGHPDKICDQISDSILDEILKEDPNARVACETSVTTGLVLVAGEITTSTYVDIPKVVRDTIRNIGYTRAKYGFDSETCAVLTSIDEQSPDIAQGVNQALEAREGQMTDAEIEAIGAGDQGLMFGYANNETPELMPLPISLSHKLARRLSEARKGEILPYLRPDGKTQVTVE-YDENDQ--SVRIDTIVISTQHHPEVTLEQIESDL 219          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_LISW6 (S-adenosylmethionine synthetase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metK PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.894e-58
Identity = 122/214 (57.01%), Postives = 145/214 (67.76%), Query Frame = 2
Query:   95 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            LFTSESV++GHPDK+ DQISDAILDA + +DPD++VACET   T LV+V GEITT   V+  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV   L  R         E IGAGDQG MFG+ATDET E MPL   LA  L  KLTE+RK     +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T +EIA DL
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGSEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTKKLDYLRPDAKTQVTVEYDELN---QPVRIDTIVVSTQHHPDITQEEIAKDL 217          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_CLONN (S-adenosylmethionine synthetase OS=Clostridium novyi (strain NT) GN=metK PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.894e-58
Identity = 118/212 (55.66%), Postives = 145/212 (68.40%), Query Frame = 2
Query:   95 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            LFTSESV EGHPDK+CDQISDAILDA L+ DP+ +VACET   T +VMV GEI+T   V+  K+VR+   +IG+     G DA+ C VL  I++QS DIA GV   L  R       E IGAGDQG MFG+AT+ET E+MPL   +A +L  KL EVRKNGT  +LRPDGKTQVTVEY +      PVR+  V++STQHD  VT ++I  D+
Sbjct:    4 LFTSESVTEGHPDKMCDQISDAILDAILKNDPNGRVACETAVTTGMVMVMGEISTNCYVDIPKVVREVISDIGYTRAKYGFDAETCSVLTSIDEQSQDIAMGVDEALESRQGQKDDVEAIGAGDQGIMFGFATNETKEYMPLPINMAHKLSRKLAEVRKNGTLAYLRPDGKTQVTVEYEDNK----PVRIDAVVVSTQHDPEVTQEQIQKDI 211          
The following BLAST results are available for this feature:
BLAST of FC869048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LACSS2.922e-5956.74S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK_LACBA3.816e-5956.28S-adenosylmethionine synthetase OS=Lactobacillus b... [more]
METK_CLOBB3.816e-5955.66S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_ANATD4.984e-5956.54S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK_GEOKA6.510e-5956.54S-adenosylmethionine synthetase OS=Geobacillus kau... [more]
METK_CALS88.502e-5955.61S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_CLOTE1.450e-5854.25S-adenosylmethionine synthetase OS=Clostridium tet... [more]
METK_BACHD1.450e-5856.54S-adenosylmethionine synthetase OS=Bacillus halodu... [more]
METK_LISW61.894e-5857.01S-adenosylmethionine synthetase OS=Listeria welshi... [more]
METK_CLONN1.894e-5855.66S-adenosylmethionine synthetase OS=Clostridium nov... [more]

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Properties
Property NameValue
Genbank descriptionC31007H12EF AbioticL1 Citrus clementina cDNA clone C31007H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869048 ID=FC869048; Name=FC869048; organism=Citrus clementina; type=EST; length=713bp
TTCCCCCCCTCTATTTCCTCTTTCTCTGGGCAGCTTTCTCTCAATTCTAG
ATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTC
ACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGAT
CTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGG
TGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAG
ATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTG
CCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACT
GTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGC
GTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCA
GGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTC
TGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGA
AAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTAC
TGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACA
CAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATC
GCTGCTGATTTGA
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