FC869048

Overview
NameFC869048
Unique NameFC869048
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_DESMR (S-adenosylmethionine synthetase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=metK PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.243e-51
Identity = 104/203 (51.23%), Postives = 138/203 (67.98%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            +LF+SESV EGHPDK+ DQISD ILDA L QDPD+ VACET   T L  + GEITTKA  ++  IVR+T + IG+ S  +G D + C V+  +++QS DIAQGV      +PE+ GAGDQG MFG+A DET   MP     A +L  +LTEVRK+G   +LRPDGKTQV VEY +      PVR+  V++++QH E +++ ++
Sbjct:    8 YLFSSESVTEGHPDKVADQISDGILDAILAQDPDAHVACETLVTTGLAFIAGEITTKAYADFPSIVRETVKEIGYNSSTMGFDWETCAVISSVDKQSVDIAQGVS---RTKPEDQGAGDQGMMFGFACDETETLMPAPIYWAHKLSRRLTEVRKSGVLDFLRPDGKTQVAVEYVDGK----PVRIDNVVVASQHAENISHADL 203          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_CORK4 (S-adenosylmethionine synthetase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=metK PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.243e-51
Identity = 111/213 (52.11%), Postives = 135/213 (63.38%), Query Frame = 2
Query:   95 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR-------PEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            LFTSESV EGHPDK+CD ISD+ILDA L  DPDS VA ET   T  V V GE+  +  V    +VR T RNIGF+S D+G D   C V V I +QS +I  GV   L  R        +  GAGDQG MFGYAT+ETPE+MPL   LA +L  +LT VRK+   P LRPDGKTQVT+ Y ++N    P+R+ T++ISTQHD  V+   +   L
Sbjct:    5 LFTSESVTEGHPDKICDAISDSILDAMLAVDPDSHVAVETVVTTGQVHVVGEVRCRGYVEIPSLVRQTLRNIGFLSSDMGFDGATCGVSVSIGEQSLEIGAGVDTALEARDGAEVEDDDRAGAGDQGLMFGYATNETPEYMPLPIALAHRLARRLTAVRKDDIVPHLRPDGKTQVTLAYNDDNN---PIRIDTIVISTQHDPGVSRQWLEEQL 214          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_BURCM (S-adenosylmethionine synthetase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metK PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.929e-51
Identity = 107/194 (55.15%), Postives = 135/194 (69.59%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH 673
            +LFTSESV+EGHPDK+ DQISDAILDA LEQD  S+VA ET   T LV++ GEITT AN++Y +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DETPE MPL   L+ +L  +   +R++G  PWLRPD K+QVTV Y +      P  + TV++STQH
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQ-GAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLPWLRPDAKSQVTVRYVDGR----PDSIDTVVLSTQH 193          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_BURA4 (S-adenosylmethionine synthetase OS=Burkholderia ambifaria (strain MC40-6) GN=metK PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.929e-51
Identity = 107/194 (55.15%), Postives = 135/194 (69.59%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH 673
            +LFTSESV+EGHPDK+ DQISDAILDA LEQD  S+VA ET   T LV++ GEITT AN++Y +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DETPE MPL   L+ +L  +   +R++G  PWLRPD K+QVTV Y +      P  + TV++STQH
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQ-GAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLPWLRPDAKSQVTVRYVDGR----PDSIDTVVLSTQH 193          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_STRST (S-adenosylmethionine synthetase OS=Streptomyces spectabilis GN=metK PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.825e-51
Identity = 114/215 (53.02%), Postives = 136/215 (63.26%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPE-------EIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAA 706
            M   LFTSESV EGHPDK+ DQISD ILDA L +DP S+VA ET   T LV V GE+TTKA     ++VR+    IG+ S   G D  +C V V I  QSPDIAQGV      R E         GAGDQG MFGYA DETPE MPL   LA +L  +L+EVRKNGT P+LRPDGKTQVT+EY  +      VR+ TV++S+QH   +  + + A
Sbjct:    1 MSRRLFTSESVTEGHPDKIADQISDTILDALLREDPTSRVAVETLITTGLVHVAGEVTTKAYAPIAQLVREKILEIGYDSSKKGFDGASCGVSVSIGAQSPDIAQGVDTAYESRVEGDEDELDRQGAGDQGLMFGYACDETPELMPLPIHLAHRLSRRLSEVRKNGTIPYLRPDGKTQVTIEYDGDKA----VRLDTVVVSSQHASDIDLESLLA 211          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_STAS1 (S-adenosylmethionine synthetase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=metK PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.825e-51
Identity = 106/213 (49.77%), Postives = 141/213 (66.20%), Query Frame = 2
Query:   95 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            LFTSESV EGHPDK+ DQ+SDAILD  L+ DP+++VACET   T + ++ GEI+T   V+  K+VR+T + IG+     G D+    VL  I++QSPDIAQGV   L  R        E  GAGDQG MFGYAT+ET  +MPL   L+ QL  +L++VRK+    +LRPDGK QVTVEY  ++    PVR+ T+++STQH E +  D+I  D+
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTTTYVDIPKVVRETIKEIGYTRAKFGYDSQTMAVLTAIDEQSPDIAQGVDTALEYRDEASEAEIEATGAGDQGLMFGYATNETDTYMPLPIFLSHQLAKRLSDVRKDEILKYLRPDGKVQVTVEYDEQD---KPVRIDTIVLSTQHAEDIELDQIKDDI 216          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_DESVM (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metK PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.825e-51
Identity = 105/203 (51.72%), Postives = 135/203 (66.50%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            + FTSESV EGHPDK+ DQISDA+LD  L QDP S+VACET   T +  + GEI TK   +  ++VR T RNIG+ S ++G D   C V+  I++QS DIAQGV       PE+ GAGDQG MFG+A DETP  MP     A QL  +LT+VRK+G   +LRPDGKTQV+ EY +      PV ++ V++S+QH + V+ND I
Sbjct:    8 YFFTSESVTEGHPDKVADQISDAVLDVLLAQDPMSRVACETLVTTGMAFIAGEIRTKGFADLPEVVRSTIRNIGYNSSEMGFDWKTCAVISSIDKQSGDIAQGVD---RGNPEDQGAGDQGMMFGFACDETPTLMPAPIYWAHQLSQRLTQVRKDGILDFLRPDGKTQVSFEYVDGK----PVHINNVVVSSQHADNVSNDTI 203          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_ANADF (S-adenosylmethionine synthetase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=metK PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.825e-51
Identity = 110/207 (53.14%), Postives = 138/207 (66.67%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            +LFTSESV EGHPDK+ DQISDA+LDA L QD   +VACET  KT  VM+ GEITT A + Y K+ R+  + IG+VS D+G D + C VLV ++QQSPDI QGV        +  GAGDQG MFGYA DET E MP     A  +  +L + R+ G   +LRPDGK+QVTVEY    G  V  R+ TV++STQH E+V+N ++ A L
Sbjct:    6 YLFTSESVTEGHPDKMADQISDAVLDAVLAQDKKGRVACETLLKTGYVMIAGEITTTARIEYPKLAREVVKRIGYVSGDMGFDGNTCGVLVAVDQQSPDIGQGV--------DVGGAGDQGMMFGYACDETNELMPAPIQYAHAVTRQLAKARRGG-LDFLRPDGKSQVTVEY---RGGKV-ARIDTVVVSTQHSESVSNRKLHAAL 199          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_THIDA (S-adenosylmethionine synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metK PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.996e-51
Identity = 102/204 (50.00%), Postives = 141/204 (69.12%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIA 703
            F+FTSESV+EGHPDK+ DQ+SDA+LDA L QD  ++VACET   T L ++ GEITT A ++Y +I R T + IG+ S D+G D + C VLV + +QSPDIAQGV        ++ GAGDQG MFGYA +ETP  MP+   LA +L  + +E+RK+G  PWLRPD K+QV++ Y +      P  + TV++STQHD  V++ +++
Sbjct:    5 FIFTSESVSEGHPDKMADQVSDAVLDAILTQDKHARVACETLLTTGLCVIAGEITTTAVIDYNQIARQTIKRIGYDSSDIGFDYNTCSVLVTVGKQSPDIAQGVDRAHDDYLDQ-GAGDQGLMFGYACNETPVLMPMPIHLAHRLTERQSELRKDGRLPWLRPDAKSQVSIRYVDGK----PHSIDTVVLSTQHDPEVSHAQLS 203          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_THEFY (S-adenosylmethionine synthetase OS=Thermobifida fusca (strain YX) GN=metK PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.996e-51
Identity = 113/204 (55.39%), Postives = 131/204 (64.22%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEI-------GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH 673
            M   LFTSESV EGHPDK+ DQISDAILD+ L  DP S+VA ET   T LV V GE+TT   V+   I+R+    IG+ S   G D  +C V V I  QSPDIAQGV      R EEI       GAGDQG MFGYA +ETPE MPL   LA  L  +L EVR++GT P+LRPDGKTQVTVEY        PVR+ TV++S+QH
Sbjct:    1 MSRRLFTSESVTEGHPDKIADQISDAILDSMLRDDPHSRVAVETLITTGLVHVAGEVTTSTYVDIPTIIREKILEIGYDSSAKGFDGASCGVSVSIGGQSPDIAQGVDNAYEAREEEIFDDLDRQGAGDQGLMFGYANNETPELMPLPITLAHALSQRLAEVRRDGTIPYLRPDGKTQVTVEYDGNR----PVRLDTVVVSSQH 200          
The following BLAST results are available for this feature:
BLAST of FC869048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DESMR2.243e-5151.23S-adenosylmethionine synthetase OS=Desulfovibrio m... [more]
METK_CORK42.243e-5152.11S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_BURCM2.929e-5155.15S-adenosylmethionine synthetase OS=Burkholderia am... [more]
METK_BURA42.929e-5155.15S-adenosylmethionine synthetase OS=Burkholderia am... [more]
METK_STRST3.825e-5153.02S-adenosylmethionine synthetase OS=Streptomyces sp... [more]
METK_STAS13.825e-5149.77S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_DESVM3.825e-5151.72S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_ANADF3.825e-5153.14S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK_THIDA4.996e-5150.00S-adenosylmethionine synthetase OS=Thiobacillus de... [more]
METK_THEFY4.996e-5155.39S-adenosylmethionine synthetase OS=Thermobifida fu... [more]

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Properties
Property NameValue
Genbank descriptionC31007H12EF AbioticL1 Citrus clementina cDNA clone C31007H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869048 ID=FC869048; Name=FC869048; organism=Citrus clementina; type=EST; length=713bp
TTCCCCCCCTCTATTTCCTCTTTCTCTGGGCAGCTTTCTCTCAATTCTAG
ATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTC
ACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGAT
CTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGG
TGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAG
ATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTG
CCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACT
GTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGC
GTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCA
GGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTC
TGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGA
AAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTAC
TGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACA
CAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATC
GCTGCTGATTTGA
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