FC869048

Overview
NameFC869048
Unique NameFC869048
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_LEPIC (S-adenosylmethionine synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=metK PE=3 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.238e-50
Identity = 106/207 (51.21%), Postives = 140/207 (67.63%), Query Frame = 2
Query:   80 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            +++ F+FTSESV EGHPDK+CDQISDA+LDA LEQDP S+VACET   TNLV++ GEIT+K  V+ ++I R+  R+IG+    +G DAD   V  ++  QSPDI+QGV        E+ GAGDQG MFG+A +ETPE MP+    + +L   L  +R      +LRPD K+QVTVEY +      PVR+ TV+ISTQH   VT+ +I
Sbjct:    2 SLKDFIFTSESVGEGHPDKVCDQISDAVLDAYLEQDPKSRVACETLVTTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ-GAGDQGLMFGFAINETPELMPMPIYYSHELVKHLAGLRHGNKLKFLRPDAKSQVTVEYKDGK----PVRIDTVVISTQHSPDVTHKQI 203          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_DECAR (S-adenosylmethionine synthetase OS=Dechloromonas aromatica (strain RCB) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.238e-50
Identity = 103/206 (50.00%), Postives = 137/206 (66.50%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            M  +LFTSESV EGHPDK+ DQISDAILDA L QD  S+VA ET   T LV++ GEITT ANV+Y ++ RDT + IG+ + + G+D   C VLV  ++QSPDIAQGV+        + GAGDQG MFGYA DETP  MPL   L+ ++  +   +RK+G  PW RPD K+QVT+ Y +      P  + TV++STQH   ++ +++
Sbjct:    1 MSDYLFTSESVGEGHPDKVADQISDAILDAILAQDKHSRVAAETLCNTGLVVLAGEITTNANVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGVNAAYDDNLGQ-GAGDQGLMFGYACDETPSLMPLPIYLSHRMVERQAMLRKDGRLPWARPDAKSQVTIRYVDGK----PHSIDTVVLSTQHSPDISLEDL 201          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_COLP3 (S-adenosylmethionine synthetase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.238e-50
Identity = 100/208 (48.08%), Postives = 136/208 (65.38%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAA 706
            M    FTSESV+EGHPDK+ DQISDA+LDA + +D  ++VACET  KT + ++ GE++T A V+ EK+ R+   +IG+ S DVG D   C ++  I QQSP+IAQGV       PEE GAGDQG MFGYAT+ETP  MP     + +L  +  E RK+G  PWLRPD K+QVT  Y +      PV + TV++STQH+  +  +++ +
Sbjct:    1 MSRHFFTSESVSEGHPDKIADQISDAVLDAIIAKDKHARVACETMVKTGVAIISGEVSTNAWVDLEKLTRNVISDIGYTSSDVGFDGATCGIMNLIGQQSPEIAQGVD---RSNPEEQGAGDQGLMFGYATNETPTLMPAPLYYSHRLVERQAEARKSGVLPWLRPDAKSQVTFIYEDNK----PVAIDTVVLSTQHNPDIKQEDLVS 201          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_RALEJ (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain JMP134) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.229e-50
Identity = 106/203 (52.22%), Postives = 137/203 (67.49%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            FLFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VA ET   T LV++ GEITT ANV+Y ++ RDT + IG+ + + G+D   C VLV  ++QSPDIAQGV    S      GAGDQG MFGYA DETPE MP     + +L  + +++R++G  PWLRPD K+QVTV Y +      P  V TV++STQH   +T  +I
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAVLDAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV-DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYSHRLVERQSQLRRDGRLPWLRPDAKSQVTVRYVDGR----PHSVDTVVLSTQHAPDITQAQI 202          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_LEPCP (S-adenosylmethionine synthetase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.229e-50
Identity = 105/194 (54.12%), Postives = 134/194 (69.07%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH 673
            FLFTSESV+EGHPDK+ DQISDAILDA  EQDP S+VA ET T T LV++ GEITT A+V+Y ++ RDT + IG+ + + G+D   C VLV  ++QS DIAQGV  H S      GAGDQG MFGYA DETPE MP     A +L  +  ++RK+G  P+LRPD K+QVT+ Y +      P  + T+++STQH
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAIFEQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGV-DHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGRLPFLRPDAKSQVTMRYVDGK----PHSIDTIVLSTQH 193          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_DESVV (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.229e-50
Identity = 103/203 (50.74%), Postives = 136/203 (67.00%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            + FTSESV EGHPDK+ DQISDA+LD  L QDP+S+VACET   T + ++ GEITT+   +   +VR+T RNIG+ S ++G D   C V+  I++QS DIAQGV    +   E+ GAGDQG MFG+A DET   MP     A QL  +LTEVRK+GT    RPDGKTQV+ EY +      PVR++ V++STQH ++ +  +I
Sbjct:    8 YYFTSESVTEGHPDKVADQISDAVLDVLLAQDPNSRVACETLVTTGMAVIAGEITTRGYADLPHVVRETIRNIGYNSSEMGFDWQTCAVISSIDKQSADIAQGVDRATN---EDQGAGDQGMMFGFACDETATLMPAPIYWAHQLSQRLTEVRKDGTVDIFRPDGKTQVSFEYVDGK----PVRINNVVVSTQHKDSASQADI 203          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_DESVH (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.229e-50
Identity = 103/203 (50.74%), Postives = 136/203 (67.00%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            + FTSESV EGHPDK+ DQISDA+LD  L QDP+S+VACET   T + ++ GEITT+   +   +VR+T RNIG+ S ++G D   C V+  I++QS DIAQGV    +   E+ GAGDQG MFG+A DET   MP     A QL  +LTEVRK+GT    RPDGKTQV+ EY +      PVR++ V++STQH ++ +  +I
Sbjct:    8 YYFTSESVTEGHPDKVADQISDAVLDVLLAQDPNSRVACETLVTTGMAVIAGEITTRGYADLPHVVRETIRNIGYNSSEMGFDWQTCAVISSIDKQSADIAQGVDRATN---EDQGAGDQGMMFGFACDETATLMPAPIYWAHQLSQRLTEVRKDGTVDIFRPDGKTQVSFEYVDGK----PVRINNVVVSTQHKDSASQADI 203          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_STAHJ (S-adenosylmethionine synthetase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=metK PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.524e-50
Identity = 105/213 (49.30%), Postives = 142/213 (66.67%), Query Frame = 2
Query:   95 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR----PEEI---GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            LFTSESV EGHPDK+ DQ+SDAILD  L+ DP+++VACET   T + ++ GEI+T   V+  K+VR+T + IG+     G D     VL  I++QSPDIAQGV   L  R     EEI   GAGDQG MFGYAT+ET  +MPL   L+ QL  +L++VRK+G   +LRPDGK QVTVEY   +    P R+ T+++S+QH + +  ++I +D+
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTSTYVDIPKVVRETIKGIGYTRAKYGYDYQTMAVLTAIDEQSPDIAQGVDKALEYRNDISEEEIEATGAGDQGLMFGYATNETETYMPLPIFLSHQLAKRLSDVRKDGILNYLRPDGKVQVTVEYDESD---KPKRIDTIVVSSQHADDIELEQIQSDI 216          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_POLSQ (S-adenosylmethionine synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.214e-50
Identity = 103/203 (50.74%), Postives = 141/203 (69.46%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            + FTSESV+EGHPDK+ DQISDAILDA L QDP ++VA ET   T LV++ GEITT ANV+Y ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DET E MP+   L+ +L  + +++R++G   WLRPD K+QVT+ Y +      P  + TV++STQHDE ++ +++
Sbjct:    5 YFFTSESVSEGHPDKVADQISDAILDAILAQDPTARVAAETLCNTGLVVLAGEITTHANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDDGLDQ-GAGDQGLMFGYACDETSELMPMPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEEISLEKL 202          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.214e-50
Identity = 103/203 (50.74%), Postives = 141/203 (69.46%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            + FTSESV+EGHPDK+ DQISD+ILDA L QDP ++VA ET   T LV++ GEITT ANV+Y ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DET E MPL   L+ +L  + +++R++G   WLRPD K+QVT+ Y +      P  + TV++STQHDE ++ +++
Sbjct:    5 YFFTSESVSEGHPDKVADQISDSILDAILAQDPTARVAAETLCNTGLVVLAGEITTNANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDDGLDQ-GAGDQGLMFGYACDETAELMPLPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEDISLEKL 202          
The following BLAST results are available for this feature:
BLAST of FC869048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LEPIC3.238e-5051.21S-adenosylmethionine synthetase OS=Leptospira inte... [more]
METK_DECAR3.238e-5050.00S-adenosylmethionine synthetase OS=Dechloromonas a... [more]
METK_COLP33.238e-5048.08S-adenosylmethionine synthetase OS=Colwellia psych... [more]
METK_RALEJ4.229e-5052.22S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_LEPCP4.229e-5054.12S-adenosylmethionine synthetase OS=Leptothrix chol... [more]
METK_DESVV4.229e-5050.74S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_DESVH4.229e-5050.74S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_STAHJ5.524e-5049.30S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_POLSQ7.214e-5050.74S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_POLNS7.214e-5050.74S-adenosylmethionine synthetase OS=Polynucleobacte... [more]

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Properties
Property NameValue
Genbank descriptionC31007H12EF AbioticL1 Citrus clementina cDNA clone C31007H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869048 ID=FC869048; Name=FC869048; organism=Citrus clementina; type=EST; length=713bp
TTCCCCCCCTCTATTTCCTCTTTCTCTGGGCAGCTTTCTCTCAATTCTAG
ATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTC
ACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGAT
CTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGG
TGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAG
ATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTG
CCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACT
GTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGC
GTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCA
GGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTC
TGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGA
AAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTAC
TGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACA
CAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATC
GCTGCTGATTTGA
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