FC869048

Overview
NameFC869048
Unique NameFC869048
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 7.584e-108
Identity = 186/210 (88.57%), Postives = 198/210 (94.29%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            METFLFTSESVNEGHPDKLCDQISDAILDACLEQDP+SKVACETCTKTN+VMVFGEITT A V+YEKIVR TCR IGF+S DVGLDAD C VLV IEQQSPDIAQGVHGHL+K+PE+IGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKN TCPWLRPDGKTQVTVEY N+ GAM+P+RVHTVLISTQHDETVTNDEIAADL
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTAAKVDYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDGGAMIPIRVHTVLISTQHDETVTNDEIAADL 210          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 9.905e-108
Identity = 185/210 (88.10%), Postives = 197/210 (93.81%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            METFLFTSESVNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETCTKTN+VMVFGEITT A V+YEKIVR TCR IGF+S DVGLDAD C VLV IEQQSPDIAQGVHGHL+K+PE+IGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKN TCPWLRPDGKTQVTVEY NE GAM+P+RVHTVLISTQHDETVTNDEIA DL
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTSAKVDYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNEGGAMIPIRVHTVLISTQHDETVTNDEIAVDL 210          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 389.037 bits (998), Expect = 1.294e-107
Identity = 186/210 (88.57%), Postives = 199/210 (94.76%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YE+IVR TCR IGF+SDDVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAG QGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKNGTC WLRPDGKTQVT+EY N+ GAMVP RVHTVLISTQHDETVTND+IAADL
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLTQDPDSKVACETCTKTNMVMVFGEITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGYQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTIEYRNDGGAMVPERVHTVLISTQHDETVTNDQIAADL 210          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 6.420e-107
Identity = 186/209 (89.00%), Postives = 197/209 (94.26%), Query Frame = 2
Query:   86 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            ETFLFTSESVNEGHPDKLCDQ+SDA+LDACL QD DSKVACET TKTN+VMV GEITTKA V+YEKIVRDTCRNIGF+SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPEE+GAGDQG MFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC W+RPDGKTQVTVEY NE+GAMVPVRVHTVLISTQHDETVTNDEIAADL
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDADSKVACETVTKTNMVMVLGEITTKATVDYEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWVRPDGKTQVTVEYLNEDGAMVPVRVHTVLISTQHDETVTNDEIAADL 212          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 1.430e-106
Identity = 186/210 (88.57%), Postives = 196/210 (93.33%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YE+IVR TCR IGF+SDDVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDET E MP  HVLAT+LGAKLTEVRKNGTCPWLRP GKTQVTVEY N+NGAMVP RVHTVLISTQHDETV NDEIA DL
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETLELMPKCHVLATKLGAKLTEVRKNGTCPWLRPHGKTQVTVEYRNDNGAMVPERVHTVLISTQHDETVPNDEIAPDL 210          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 2.289e-96
Identity = 166/210 (79.05%), Postives = 185/210 (88.10%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            +E+FL+TSESVNEGHPDK+CDQ+SDA+LDACLEQDPDSKVACETC KT +VMVFGEITTKA V+YE IVR  C+ IGF S+DVGLDAD CKVLV+IE+QSPDI QGVHG  +K  EEIGAGDQGHMFGYATDETPE MPL+HVLATQLG KLTEVRKNG CPWLRPDGKTQVTVEY  E GAM+P RVHT+LISTQH+  VTN++I  DL
Sbjct:    4 LESFLYTSESVNEGHPDKICDQVSDAVLDACLEQDPDSKVACETCCKTGMVMVFGEITTKAKVDYEAIVRKVCKEIGFTSEDVGLDADKCKVLVHIEEQSPDIGQGVHGMGTKALEEIGAGDQGHMFGYATDETPELMPLTHVLATQLGYKLTEVRKNGVCPWLRPDGKTQVTVEYKREGGAMIPQRVHTILISTQHNPDVTNEKIREDL 213          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 2.530e-95
Identity = 164/177 (92.66%), Postives = 174/177 (98.31%), Query Frame = 2
Query:  182 QDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            QDPDSKVACETCTKTN+VMVFGEITTK N++YEKIVRDTCRNIGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRK+GTCPWLRPDGKTQVT+EYYNENGAMVP+RVHTVLISTQHDETVTND+IAADL
Sbjct:    1 QDPDSKVACETCTKTNMVMVFGEITTKGNIDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTIEYYNENGAMVPIRVHTVLISTQHDETVTNDKIAADL 177          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 346.665 bits (888), Expect = 7.362e-95
Identity = 166/183 (90.71%), Postives = 175/183 (95.63%), Query Frame = 2
Query:  164 LDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            +DACLEQD DSKVACETCTKTNLVMVFGEITTKANV+YEKIVR+TCRNIGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGH +K+PEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDG TQVTVEYYN+ GAMVP+RVHTVLISTQHDETVTNDEIAADL
Sbjct:    3 VDACLEQDSDSKVACETCTKTNLVMVFGEITTKANVDYEKIVRNTCRNIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGNTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADL 185          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.437e-90
Identity = 157/207 (75.85%), Postives = 180/207 (86.96%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            FLFTSESVNEGHPDKL DQISD ILDACLEQDPDSKVACET TKTN+VMVFGEITTKA V+YE +VR  CR++GF+S++ GLD +NC+VLV +  QSPDI QGVHG  +K  EEIGAGDQGHMFGYATDETPE MPL+HVLAT+LG +LT VRK+GTCPW+ PDGKTQVT+EY NE GAM+P RVHT+LISTQH E V+N++IA DL
Sbjct:    3 FLFTSESVNEGHPDKLADQISDGILDACLEQDPDSKVACETATKTNMVMVFGEITTKAKVDYEAVVRQVCRDVGFISNETGLDGNNCRVLVELHDQSPDIGQGVHGMGTKSLEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGHRLTVVRKDGTCPWVLPDGKTQVTIEYENEGGAMIPKRVHTILISTQHIEGVSNEKIAEDL 209          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 3.201e-90
Identity = 157/207 (75.85%), Postives = 178/207 (85.99%), Query Frame = 2
Query:   92 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            FLFTSESVNEGHPDKL DQISD ILDACL QDPDSKVACET TKTN+VMVFGEITTKA V+YE +VR  CR++GF+SD+ GLD + C+VLV +  QSPDI QGVHG  +K  E+IGAGDQGHMFGYATDETPE MPL+HVLAT+LG +LT VRK+GTCPW+ PDGKTQVT+EY NE GAMVP RVHT+LISTQH E VTN++IA DL
Sbjct:    3 FLFTSESVNEGHPDKLADQISDGILDACLAQDPDSKVACETATKTNMVMVFGEITTKAKVDYEAVVRQVCRDVGFISDETGLDGNKCRVLVELHDQSPDIGQGVHGMGTKSDEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGHRLTVVRKDGTCPWVLPDGKTQVTIEYENEGGAMVPKRVHTILISTQHIEGVTNEKIAEDL 209          
The following BLAST results are available for this feature:
BLAST of FC869048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_ARATH7.584e-10888.57S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK4_BRAJU9.905e-10888.10S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK3_PICSI1.294e-10788.57S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK3_HORVU6.420e-10789.00S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK_PINBN1.430e-10688.57S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK_CHLRE2.289e-9679.05S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK3_ACTCH2.530e-9592.66S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]
METK1_PEA7.362e-9590.71S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK_OSTTA1.437e-9075.85S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK_OSTLU3.201e-9075.85S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31007H12EF AbioticL1 Citrus clementina cDNA clone C31007H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869048 ID=FC869048; Name=FC869048; organism=Citrus clementina; type=EST; length=713bp
TTCCCCCCCTCTATTTCCTCTTTCTCTGGGCAGCTTTCTCTCAATTCTAG
ATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTC
ACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGAT
CTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGG
TGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAG
ATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTG
CCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACT
GTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGC
GTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCA
GGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTC
TGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGA
AAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTAC
TGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACA
CAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATC
GCTGCTGATTTGA
back to top