FC869048

Overview
NameFC869048
Unique NameFC869048
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.671e-78
Identity = 142/211 (67.30%), Postives = 167/211 (79.15%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSK-RPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            M ++LFTSESV EGHPDK+CDQ+SDA+LDACL QDP SKVACET TKT +VM+ GEITTKANV+Y+K+VR+  + IG+     G D   C VLV IEQQSPDIAQGV  H+ K  PE+IGAGDQGHMFGYAT+ETP  MPL+H LA++L  KLTE+R NGT  W RPD KTQVTVEY  E   + PVRVHT++ISTQHDE VTN++I ADL
Sbjct:    1 MSSYLFTSESVTEGHPDKICDQVSDAVLDACLAQDPLSKVACETATKTGMVMILGEITTKANVDYQKVVREAVKKIGYDDSSKGFDYKTCNVLVAIEQQSPDIAQGV--HIGKVNPEDIGAGDQGHMFGYATNETPTLMPLTHFLASELVNKLTELRHNGTLAWARPDAKTQVTVEYKKEGHKITPVRVHTIVISTQHDEKVTNEQIRADL 209          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.436e-76
Identity = 132/205 (64.39%), Postives = 165/205 (80.49%), Query Frame = 2
Query:   86 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            +T LFTSE V+E HPDKLCDQ+SDAILDACL  DP SKVACET +KT +VMVFGEITTK++ +Y+K++R+T + IGF    +G D   C +LV IEQQSPDIAQGV  H+ +  +++GAGDQGHMFG+AT+ETPEFMP++HVLAT+L  ++TEVR N    W+RPD KTQVTVEY NENG ++P+R HTV+IS QH E VTN+EI
Sbjct:    5 KTLLFTSECVSESHPDKLCDQVSDAILDACLANDPYSKVACETASKTGMVMVFGEITTKSSFDYQKVIRETVKRIGFTDSSIGFDYKTCNILVAIEQQSPDIAQGV--HVGRSDDDLGAGDQGHMFGHATNETPEFMPMTHVLATRLCQRMTEVRNNSILSWMRPDAKTQVTVEYRNENGTLIPLRRHTVVISVQHSEDVTNEEI 207          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.035e-72
Identity = 131/204 (64.22%), Postives = 163/204 (79.90%), Query Frame = 2
Query:   89 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDPD+KVACET  KT ++++ GEIT++A V+Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGV  HL +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEM 218          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.035e-72
Identity = 131/204 (64.22%), Postives = 163/204 (79.90%), Query Frame = 2
Query:   89 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDPD+KVACET  KT ++++ GEIT++A V+Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGV  HL +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEM 218          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.035e-72
Identity = 131/204 (64.22%), Postives = 163/204 (79.90%), Query Frame = 2
Query:   89 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDPD+KVACET  KT ++++ GEIT++A V+Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGV  HL +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEM 218          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 272.707 bits (696), Expect = 1.351e-72
Identity = 130/204 (63.73%), Postives = 163/204 (79.90%), Query Frame = 2
Query:   89 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDPD+KVACET  KT ++++ GEIT++A ++Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGV  HL +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEM 218          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK2_RAT (S-adenosylmethionine synthetase isoform type-2 OS=Rattus norvegicus GN=Mat2a PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.765e-72
Identity = 129/204 (63.24%), Postives = 163/204 (79.90%), Query Frame = 2
Query:   89 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 700
            TFLFTSESV EGHPDK+CDQI+DA+LDA L+QDPD+KVACET  KT ++++ GEIT++A ++Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGV  HL +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+
Sbjct:   17 TFLFTSESVGEGHPDKICDQINDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVIPIRVHTIVISVQHDEEVCLDEM 218          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_SCHPO (S-adenosylmethionine synthetase OS=Schizosaccharomyces pombe GN=sam1 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.346e-71
Identity = 124/209 (59.33%), Postives = 168/209 (80.38%), Query Frame = 2
Query:   86 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            +TFLFTSESV EGHPDK+CDQISDAILDACL+ DP SKVACET +KT +VMVFGEITT++ ++Y+K++R+T ++IG+   + G D   C VLV IEQQSPDIAQG+  H  K  EE+GAGDQG MFGYATDETPE +PL+ +LA +L A ++  R++G+ PWLRPD KTQVT+EY  ENGA++P RV T+++S QH ++++ +++ +++
Sbjct:    3 QTFLFTSESVGEGHPDKICDQISDAILDACLKDDPFSKVACETASKTGMVMVFGEITTRSQIDYQKVIRNTIKSIGYDDSEKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELGAGDQGIMFGYATDETPEKLPLTILLAHKLNAAMSVARRDGSLPWLRPDTKTQVTIEYEEENGAVIPRRVDTIVVSAQHADSISTEDLRSEI 209          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK_ASCIM (S-adenosylmethionine synthetase OS=Ascobolus immersus PE=3 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.679e-70
Identity = 125/208 (60.10%), Postives = 163/208 (78.37%), Query Frame = 2
Query:   89 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            +FLFTSESV EGHPDK+ DQ+SDA+LDACL +DP SKVACET TKT ++MVFGEITTKA+++Y+KI+R+  ++IG+     G D   C VLV IEQQSPDIAQG+  H  K  EE+GAGDQG MFGYATDETPE +PL+ +LA QL A + + R++G+ PWLRPD KTQVT+EY ++ GA+VP +V TV++S QH E +T +E+  ++
Sbjct:   13 SFLFTSESVGEGHPDKIADQVSDAVLDACLAEDPLSKVACETATKTGMIMVFGEITTKAHLDYQKIIRNAVKDIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELGAGDQGIMFGYATDETPELLPLTLLLAHQLNANMAKARRDGSLPWLRPDTKTQVTIEYEHDGGAVVPKKVKTVVVSAQHSEDITTEELRKEI 218          
BLAST of FC869048 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 263.848 bits (673), Expect = 6.276e-70
Identity = 128/209 (61.24%), Postives = 160/209 (76.56%), Query Frame = 2
Query:   86 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADL 712
            +TFLFTSESV EGHPDK+CDQ+SDAILDACLEQDP SKVACET  KT ++MVFGEITTKA ++Y++IVRDT + IG+     G D   C VLV IEQQSPDIAQG+  H  K  E++GAGDQG MFGYATDETPE +PL+ +LA +L   + + R++G+ PWLRPD KTQVTVEY ++NG  VP R+ TV+IS QH + ++  ++   L
Sbjct:    5 KTFLFTSESVGEGHPDKICDQVSDAILDACLEQDPFSKVACETAAKTGMIMVFGEITTKARLDYQQIVRDTIKKIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKSLEDLGAGDQGIMFGYATDETPEGLPLTILLAHKLNMAMADARRDGSLPWLRPDTKTQVTVEYEDDNGRWVPKRIDTVVISAQHADEISTADLRTQL 211          
The following BLAST results are available for this feature:
BLAST of FC869048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DICDI3.671e-7867.30S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_ACACA3.436e-7664.39S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK2_PONAB1.035e-7264.22S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA1.035e-7264.22S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN1.035e-7264.22S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE1.351e-7263.73S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_RAT1.765e-7263.24S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_SCHPO4.346e-7159.33S-adenosylmethionine synthetase OS=Schizosaccharom... [more]
METK_ASCIM3.679e-7060.10S-adenosylmethionine synthetase OS=Ascobolus immer... [more]
METK2_YEAST6.276e-7061.24S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31007H12EF AbioticL1 Citrus clementina cDNA clone C31007H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869048 ID=FC869048; Name=FC869048; organism=Citrus clementina; type=EST; length=713bp
TTCCCCCCCTCTATTTCCTCTTTCTCTGGGCAGCTTTCTCTCAATTCTAG
ATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTC
ACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGAT
CTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGG
TGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAG
ATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTG
CCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACT
GTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGC
GTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCA
GGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTC
TGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGA
AAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTAC
TGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACA
CAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATC
GCTGCTGATTTGA
back to top