FC869060

Overview
NameFC869060
Unique NameFC869060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length601
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.747e-69
Identity = 128/179 (71.51%), Postives = 145/179 (81.01%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MVT E+IR+AQRAEG AT++AI TATP NCV Q+ YPDYYF ITNSEH T            SMIRKR+M LTEE LK NPNM  +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LR+AKDLAE
Sbjct:    1 MVTVEDIRRAQRAEGPATVMAIGTATPENCVDQSTYPDYYFRITNSEHRTDLKEKFKRMCEKSMIRKRYMHLTEEFLKENPNMTAYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRMAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHSE_IPOPU (Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.747e-69
Identity = 126/179 (70.39%), Postives = 146/179 (81.56%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MVT EE+RKAQRA+G ATI+AI T+TP NCV Q+ YPDYYF ITNSEH+             SMI+KR+M LTEEIL  NPN+C +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T++RLAKDLAE
Sbjct:    1 MVTVEEVRKAQRAQGPATIMAIGTSTPQNCVDQSTYPDYYFRITNSEHLVELKEKFKRMCEKSMIKKRYMYLTEEILTENPNICAYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLQPSVKRFMMYQQGCFAGGTVIRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS2_SECCE (Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.747e-69
Identity = 126/178 (70.79%), Postives = 145/178 (81.46%), Query Frame = 2
Query:   68 VTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            +T EE+RKAQRAEG AT+LAI TATP NCV QADYPDYYF IT S+HM             S IRKR+M LTEEIL+ NPNMC +M  SLDARQDI +VEVPKLGK AA KAIKEWGQP+S ITHL+FCT++GVDMPGADYQLT+++GL P VKR+M+YQQGC+AG T+LRLAKDLAE
Sbjct:    5 MTVEEVRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYMHLTEEILQDNPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 182          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.747e-69
Identity = 128/179 (71.51%), Postives = 146/179 (81.56%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MVT EE+RKAQRAEG ATILAI T TP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL+P VKR+M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLSPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.747e-69
Identity = 126/178 (70.79%), Postives = 145/178 (81.46%), Query Frame = 2
Query:   68 VTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            +T EE+RKAQRAEG AT+LAI TATP NCV QADYPDYYF IT S+HM             S IRKR+M LTEEIL+ NPNMC +M  SLDARQDI +VEVPKLGK AA KAIKEWGQP+S ITHL+FCT++GVDMPGADYQLT+++GL P VKR+M+YQQGC+AG T+LRLAKDLAE
Sbjct:    5 MTVEEVRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYMHLTEEILQDNPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 182          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.282e-69
Identity = 126/179 (70.39%), Postives = 147/179 (82.12%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MVT EE+RKAQRAEG ATILAI TATPPN V Q+ YPD+YF +TNSEH              S I+KR+M LTEEILK NPN+C +M  SLDARQD+ +VE+PKLGKEAAT+AIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPPNYVDQSTYPDFYFRVTNSEHKKELKAKFQRMCDNSQIKKRYMHLTEEILKENPNICAYMAPSLDARQDMVVVEIPKLGKEAATRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS4_IPOBA (Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF4 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.282e-69
Identity = 128/179 (71.51%), Postives = 145/179 (81.01%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MVT EE+RKAQRAEG ATILAI T TP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKERFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: ACS4_RUTGR (Probable acridone synthase 4 OS=Ruta graveolens GN=ACS4 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.282e-69
Identity = 127/179 (70.95%), Postives = 145/179 (81.01%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            M + +E+RKAQ +EG A ILAI TATP N  +QADYPDYYF +T SEHMT            SMIRKRHMC +EE LKANP +  HMG SL+ARQDI++VE P+LG EAA KAIKEWGQPKS+ITHLIFC+SAGVDMPGADYQLTR++GLNP VKRMM+YQQGCYAG T+LRLAKDLAE
Sbjct:    1 MESLKEMRKAQMSEGPAAILAIGTATPNNVYMQADYPDYYFRMTKSEHMTELKDKFRTLCEKSMIRKRHMCFSEEFLKANPEVSKHMGKSLNARQDIAVVETPRLGNEAAVKAIKEWGQPKSSITHLIFCSSAGVDMPGADYQLTRILGLNPSVKRMMVYQQGCYAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHSY_ANTMA (Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 2.981e-69
Identity = 127/179 (70.95%), Postives = 146/179 (81.56%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MVT EE+R+AQRAEG AT+LAI TATP NCV Q+ YPDYYF ITNSEHMT            S I++R+M LTEEILK NP MC +M  SLDARQDI +VEVP+LGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LR+AKDLAE
Sbjct:    1 MVTVEEVRRAQRAEGPATVLAIGTATPANCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSNIKRRYMHLTEEILKENPAMCEYMAPSLDARQDIVVVEVPRLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRMAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS8_IPOBA (Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DIV PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 2.981e-69
Identity = 127/179 (70.95%), Postives = 145/179 (81.01%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MVT EE+RKAQRAEG ATILAI T TP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH++FCT++G+DMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGIDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179          
The following BLAST results are available for this feature:
BLAST of FC869060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHSY_PERFR1.747e-6971.51Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]
CHSE_IPOPU1.747e-6970.39Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE... [more]
CHS2_SECCE1.747e-6970.79Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2... [more]
CHS2_IPOBA1.747e-6971.51Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS1_SECCE1.747e-6970.79Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]
CHSY_HYDMC2.282e-6970.39Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHS4_IPOBA2.282e-6971.51Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF... [more]
ACS4_RUTGR2.282e-6970.95Probable acridone synthase 4 OS=Ruta graveolens GN... [more]
CHSY_ANTMA2.981e-6970.95Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3... [more]
CHS8_IPOBA2.981e-6970.95Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DI... [more]

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Properties
Property NameValue
Genbank descriptionC31008A12EF AbioticL1 Citrus clementina cDNA clone C31008A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869060 ID=FC869060; Name=FC869060; organism=Citrus clementina; type=EST; length=601bp
AAGCGCAAACTTATCAATTAACTAAGATATAAGTACTGTTTTGGAAGCAA
TCTGACGATCAGAGATGGTAACAACGGAGGAGATTAGAAAGGCTCAGCGA
GCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGGCAACGCCGCCCAA
TTGTGTCATCCAAGCTGATTATCCTGACTATTACTTCGGGATCACCAACA
GCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCTCTTGTGTGAGAAG
TCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAGAGATTTTAAAAGC
AAACCCTAATATGTGCTTACACATGGGGACATCACTCGATGCGCGCCAGG
ACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGAGGCGGCAACCAAA
GCTATCAAAGAATGGGGACAGCCCAAATCCAATATCACCCATCTCATTTT
CTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGACTATCAGCTCACAA
GACTCATCGGCCTCAACCCGGATGTTAAGCGTATGATGATATATCAACAA
GGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTAAAGATCTGGCTGA
A
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