FC869080
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ESCF3 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ghrB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14 Identity = 64/234 (27.35%), Postives = 105/234 (44.87%), Query Frame = 3
Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKN-KFFQENSSAIRAVVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
K S+++ + + L Q L FT+ ++ S + + E + ++G ++ DA L++ +P L ++ SVG V + +TP RRV E E VK+G+W G GS K++GIVG+GRIG A+A+R F PI Y++R + A ++ Y ++ L + + LTEETHH+ + + S I IN
Sbjct: 2 KPSIILYKKLPDVLLQRLEEHFTVTQVSNLSPQTVEQHAEAFANAEGLLGSSEKVDDA-LLEKMPKLRATSTISVGYDNFDVDALNARKVLLMHTPTVLTETVADTLMALILATSRRVVEVAERVKAGEWTASIGPDWFGSDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRQHPQAEERFNARYCDLDTLLQEADFVCLILPLTEETHHLFGAEQFAKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ECOSM (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14 Identity = 65/237 (27.43%), Postives = 107/237 (45.15%), Query Frame = 3
Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRA----VVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
K SV++ + + L Q L FT+ ++ S + E ++AI A ++G + DA L++ +P L ++ SVG + + +TP RRV E E VK+G+W G G+ K++GIVG+GRIG A+A+R + F PI Y++R A ++ Y ++ L + + LT+ETHH+ + + S I IN
Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTV---EQNAAIFAEAEGLLGSNE-NVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAQFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SHIF8 (Glyoxylate/hydroxypyruvate reductase B OS=Shigella flexneri serotype 5b (strain 8401) GN=ghrB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14 Identity = 63/235 (26.81%), Postives = 103/235 (43.83%), Query Frame = 3
Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRAVVG--DTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
K SV++ + + L Q L A FT+ ++ S + +N++ G + DA L++ +P L ++ SVG + + +TP RRV E E VK+G+W G G+ K++GIVG+GRIG A+A+R F PI Y++R A ++ Y ++ L + + LT+ETHH+ + + S I IN
Sbjct: 2 KPSVILYKALPDDLLQRLQAHFTVHQVANLSPQTVV--QNAAIFAEAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ENTS8 (Glyoxylate/hydroxypyruvate reductase B OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ghrB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14 Identity = 52/178 (29.21%), Postives = 80/178 (44.94%), Query Frame = 3
Query: 171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
DA L++ +P L ++ SVG + + +TP RR E E VK+G+W G G K++GIVG+GRIG A+A+R F PI Y++R S A ++ Y ++ L + + V LT+ETHH++ + + S I IN
Sbjct: 57 DAALLEKMPALRAASTVSVGYDNFDVDALSAKKIALMHTPTVLTETVADTLMTLVLTTARRALEVAERVKAGEWTGSIGPDWFGCDVHHKTLGIVGMGRIGLALAQRAHFGFNMPILYNARRHHSEAEERFNARYCDLDTLLAESDFVCVILPLTDETHHMIGAEQFRKMKKSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ENTAG (Glyoxylate/hydroxypyruvate reductase B OS=Enterobacter agglomerans GN=tkrA PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14 Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 3
Query: 348 RRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
RRV E E VK+G+W+ G G K +GI+G+GRIG A+A+R FG PI Y++R A ++ Y ++ L L ++ LTE+THH++ R+ + + PS ILIN
Sbjct: 115 RRVVEVAERVKAGEWRRSIGPDWFGIDVHHKKMGILGMGRIGLALAQRAHHGFGMPILYNARKHHEEAESRFNAQYCDLDTLLRESDFLCISLPLTEQTHHMIGREQLAKMKPSAILIN 233
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SHISS (Glyoxylate/hydroxypyruvate reductase B OS=Shigella sonnei (strain Ss046) GN=ghrB PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 65/237 (27.43%), Postives = 106/237 (44.73%), Query Frame = 3
Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRA----VVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
K SV++ + + L Q L FT+ ++ S + E ++AI A ++G + DA L++ +P L ++ SVG + + +TP RRV E E VK+G+W G G+ K++GIVG+GRIG A+A+R F PI Y++R A ++ Y ++ L + + LT+ETHH+ + + S I IN
Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTV---EQNAAIFAEAEGLLGSNE-NVDAALLEKMPKLHATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SHIB3 (Glyoxylate/hydroxypyruvate reductase B OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 65/237 (27.43%), Postives = 106/237 (44.73%), Query Frame = 3
Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRA----VVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
K SV++ + + L Q L FT+ ++ S + E ++AI A ++G + DA L++ +P L ++ SVG + + +TP RRV E E VK+G+W G G+ K++GIVG+GRIG A+A+R F PI Y++R A ++ Y ++ L + + LT+ETHH+ + + S I IN
Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTV---EQNAAIFAEAEGLLGSNE-NVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ECOUT (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain UTI89 / UPEC) GN=ghrB PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 65/237 (27.43%), Postives = 106/237 (44.73%), Query Frame = 3
Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRA----VVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
K SV++ + + L Q L FT+ ++ S + E ++AI A ++G + DA L++ +P L ++ SVG + + +TP RRV E E VK+G+W G G+ K++GIVG+GRIG A+A+R F PI Y++R A ++ Y ++ L + + LT+ETHH+ + + S I IN
Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTV---EQNAAIFAEAEGLLGSNE-NVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ECOSE (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain SE11) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 65/237 (27.43%), Postives = 106/237 (44.73%), Query Frame = 3
Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRA----VVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
K SV++ + + L Q L FT+ ++ S + E ++AI A ++G + DA L++ +P L ++ SVG + + +TP RRV E E VK+G+W G G+ K++GIVG+GRIG A+A+R F PI Y++R A ++ Y ++ L + + LT+ETHH+ + + S I IN
Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTV---EQNAAIFAEAEGLLGSNE-NVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ECOLC (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 65/237 (27.43%), Postives = 106/237 (44.73%), Query Frame = 3
Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRA----VVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
K SV++ + + L Q L FT+ ++ S + E ++AI A ++G + DA L++ +P L ++ SVG + + +TP RRV E E VK+G+W G G+ K++GIVG+GRIG A+A+R F PI Y++R A ++ Y ++ L + + LT+ETHH+ + + S I IN
Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTV---EQNAAIFAEAEGLLGSNE-NVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFIN 234 The following BLAST results are available for this feature:
BLAST of FC869080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869080 ID=FC869080; Name=FC869080; organism=Citrus clementina; type=EST; length=688bpback to top |