FC869080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_YERPS (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis GN=ghrB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 61/235 (25.96%), Postives = 103/235 (43.83%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRAVVGDTKCGA--DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K S+++ + L Q LA FT+ + N+ E +A++ G G D + + P L ++ SVG + + +TP RRV E E VK+G+W+ G G K++GI+G+GRIG A+A+R F P+ Y SR A ++ + ++ L + L + +TE+T+H++ R+ + + S ILIN Sbjct: 2 KPSIVLYKSIPTDLHQRLAQHFTVNSFDGLTPDNQ--PELLAALQQAEGLIGSGGKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_YERPP (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis (strain Pestoides F) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 61/235 (25.96%), Postives = 103/235 (43.83%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRAVVGDTKCGA--DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K S+++ + L Q LA FT+ + N+ E +A++ G G D + + P L ++ SVG + + +TP RRV E E VK+G+W+ G G K++GI+G+GRIG A+A+R F P+ Y SR A ++ + ++ L + L + +TE+T+H++ R+ + + S ILIN Sbjct: 2 KPSIVLYKSIPTDLHQRLAQHFTVNSFDGLTPDNQ--PELLAALQQAEGLIGSGGKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_YERPN (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 61/235 (25.96%), Postives = 103/235 (43.83%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRAVVGDTKCGA--DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K S+++ + L Q LA FT+ + N+ E +A++ G G D + + P L ++ SVG + + +TP RRV E E VK+G+W+ G G K++GI+G+GRIG A+A+R F P+ Y SR A ++ + ++ L + L + +TE+T+H++ R+ + + S ILIN Sbjct: 2 KPSIVLYKSIPTDLHQRLAQHFTVNSFDGLTPDNQ--PELLAALQQAEGLIGSGGKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_YERPG (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 61/235 (25.96%), Postives = 103/235 (43.83%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRAVVGDTKCGA--DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K S+++ + L Q LA FT+ + N+ E +A++ G G D + + P L ++ SVG + + +TP RRV E E VK+G+W+ G G K++GI+G+GRIG A+A+R F P+ Y SR A ++ + ++ L + L + +TE+T+H++ R+ + + S ILIN Sbjct: 2 KPSIVLYKSIPTDLHQRLAQHFTVNSFDGLTPDNQ--PELLAALQQAEGLIGSGGKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_YERPE (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis GN=ghrB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 61/235 (25.96%), Postives = 103/235 (43.83%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRAVVGDTKCGA--DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K S+++ + L Q LA FT+ + N+ E +A++ G G D + + P L ++ SVG + + +TP RRV E E VK+G+W+ G G K++GI+G+GRIG A+A+R F P+ Y SR A ++ + ++ L + L + +TE+T+H++ R+ + + S ILIN Sbjct: 2 KPSIVLYKSIPTDLHQRLAQHFTVNSFDGLTPDNQ--PELLAALQQAEGLIGSGGKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_YERPB (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 61/235 (25.96%), Postives = 103/235 (43.83%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRAVVGDTKCGA--DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K S+++ + L Q LA FT+ + N+ E +A++ G G D + + P L ++ SVG + + +TP RRV E E VK+G+W+ G G K++GI+G+GRIG A+A+R F P+ Y SR A ++ + ++ L + L + +TE+T+H++ R+ + + S ILIN Sbjct: 2 KPSIVLYKSIPTDLHQRLAQHFTVNSFDGLTPDNQ--PELLAALQQAEGLIGSGGKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_YERPA (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 61/235 (25.96%), Postives = 103/235 (43.83%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRAVVGDTKCGA--DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K S+++ + L Q LA FT+ + N+ E +A++ G G D + + P L ++ SVG + + +TP RRV E E VK+G+W+ G G K++GI+G+GRIG A+A+R F P+ Y SR A ++ + ++ L + L + +TE+T+H++ R+ + + S ILIN Sbjct: 2 KPSIVLYKSIPTDLHQRLAQHFTVNSFDGLTPDNQ--PELLAALQQAEGLIGSGGKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_YERP3 (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 61/235 (25.96%), Postives = 103/235 (43.83%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRAVVGDTKCGA--DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K S+++ + L Q LA FT+ + N+ E +A++ G G D + + P L ++ SVG + + +TP RRV E E VK+G+W+ G G K++GI+G+GRIG A+A+R F P+ Y SR A ++ + ++ L + L + +TE+T+H++ R+ + + S ILIN Sbjct: 2 KPSIVLYKSIPTDLHQRLAQHFTVNSFDGLTPDNQ--PELLAALQQAEGLIGSGGKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ECO7I (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 65/237 (27.43%), Postives = 106/237 (44.73%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRA----VVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K SV++ + + L Q L FT+ ++ S + E ++AI A ++G + DA L++ +P L ++ SVG + + +TP RRV E E VK+G+W G G+ K++GIVG+GRIG A+A+R F PI Y++R A ++ Y ++ L + + LT+ETHH+ + + S I IN Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTV---EQNAAIFAEAEGLLGSNE-NVDAVLLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: Y1879_STAES (Putative 2-hydroxyacid dehydrogenase SE_1879 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1879 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13 Identity = 50/187 (26.74%), Postives = 80/187 (42.78%), Query Frame = 3 Query: 141 AVVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKNGH--FELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISY---HSRSEKSHANYKYYTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 A+V D ++IDS L+I+A+Y G + VTNTP RR+ E D ++ + F G + SGK++GI+GLG IG A+AKR AF + Y H + EK Y ++ L N + + + HH+++ + + + + LIN Sbjct: 47 ALVSLLSTSVDKDIIDSANNLKIIANYGAGFNNIDVEYARQQNIDVTNTPHASTNATADLTIGLILSVARRIVEGDHLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGGAVAKRARAFDMDVLYTGPHRKEEKERDIGAKYVDLDTLLKNADFITINAAYNPSLHHMIDTEQFNKMKSTAYLIN 233 The following BLAST results are available for this feature:
BLAST of FC869080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869080 ID=FC869080; Name=FC869080; organism=Citrus clementina; type=EST; length=688bpback to top |