FC869080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: Y1888_STAEQ (Putative 2-hydroxyacid dehydrogenase SERP1888 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1888 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13 Identity = 49/187 (26.20%), Postives = 80/187 (42.78%), Query Frame = 3 Query: 141 AVVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKNGH--FELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISY---HSRSEKSHANYKYYTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 A++ D ++IDS L+I+A+Y G + VTNTP RR+ E D ++ + F G + SGK++GI+GLG IG A+AKR AF + Y H + EK Y ++ L N + + + HH+++ + + + + LIN Sbjct: 47 ALISLLSTSVDKDIIDSANNLKIIANYGAGFNNIDVEYARQQNIDVTNTPHASTNATADLTIGLILSVARRIVEGDHLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGGAVAKRARAFDMDVLYTGPHRKEEKERDIGAKYVDLDTLLKNADFITINAAYNPSLHHMIDTEQFNKMKSTAYLIN 233
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ECOHS (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O9:H4 (strain HS) GN=ghrB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13 Identity = 65/237 (27.43%), Postives = 105/237 (44.30%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRA----VVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K SV++ + + L Q L FT+ ++ S + E ++AI A ++G + DA L++ +P L ++ SVG + + +TP RRV E E VK+G W G G+ K++GIVG+GRIG A+A+R F PI Y++R A ++ Y ++ L + + LT+ETHH+ + + S I IN Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTV---EQNAAIFAEAEGLLGSNE-NVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGGWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ECOLU (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.743e-13 Identity = 64/235 (27.23%), Postives = 101/235 (42.98%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRAVVG--DTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKYYTNIIDLASNCQILIVAC---SLTEETHHIVNRKVIDALXPSGILIN 686 K SV++ + + L Q L FT+ ++ S + ++N++ G + DA L+ +P L ++ SVG + + +TP RRV E E VK+G+W G G+ K++GIVG+GRIG A+A+R F PI Y++R A ++ DL S Q C LT+ET+H+ + + S I IN Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQT--IEQNAAIFAEAEGLLGSNENVDAALLGKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDSLLQESDFVCLILPLTDETYHLFGAEQFGKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: Y606_STAS1 (Putative 2-hydroxyacid dehydrogenase SSP0606 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0606 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 48/187 (25.67%), Postives = 82/187 (43.85%), Query Frame = 3 Query: 141 AVVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKNGH--FELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISY---HSRSEKSHANYKYYTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 A++ D E+ID+ L+I+ +Y G + VTNTP RR+ E D+ ++ + F G + SGK++GI+GLG IG+A+A+R +AF I Y H + +K Y ++ L N + + + HH +++ + + P+ LIN Sbjct: 48 ALISLLSTSVDKEVIDAANNLKIITNYGAGFNNVDIDYARQQNIDVTNTPKASTNSTAELTFALVLAVARRIPEGDKLCRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRAKAFDMNILYTGPHQKVDKEREIGAKYVDLETLLKNADFVTINAAYNPSLHHQIDKAQFEMMKPTSYLIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ECOLI (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain K12) GN=ghrB PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 64/237 (27.00%), Postives = 106/237 (44.73%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRA----VVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K SV++ + + L Q L FT+ ++ S + E ++AI A ++G + +A L++ +P L ++ SVG + + +TP RRV E E VK+G+W G G+ K++GIVG+GRIG A+A+R F PI Y++R A ++ Y ++ L + + LT+ETHH+ + + S I IN Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTV---EQNAAIFAEAEGLLGSNE-NVNAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ECOL5 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 64/237 (27.00%), Postives = 106/237 (44.73%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRA----VVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K SV++ + + L Q L FT+ ++ S + E ++AI A ++G + DA L++ +P L ++ SVG + + +TP RRV E E VK+G+W G G+ K++GIVG+GRIG A+A+R F PI Y++R A ++ Y ++ L + + LT+ET+H+ + + S I IN Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTV---EQNAAIFAEAEGLLGSNE-NVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETYHLFGAEQFGKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ECODH (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain K12 / DH10B) GN=ghrB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 64/237 (27.00%), Postives = 106/237 (44.73%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRA----VVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K SV++ + + L Q L FT+ ++ S + E ++AI A ++G + +A L++ +P L ++ SVG + + +TP RRV E E VK+G+W G G+ K++GIVG+GRIG A+A+R F PI Y++R A ++ Y ++ L + + LT+ETHH+ + + S I IN Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTV---EQNAAIFAEAEGLLGSNE-NVNAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_ECOBW (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain K12 / BW2952) GN=ghrB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 64/237 (27.00%), Postives = 106/237 (44.73%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRA----VVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K SV++ + + L Q L FT+ ++ S + E ++AI A ++G + +A L++ +P L ++ SVG + + +TP RRV E E VK+G+W G G+ K++GIVG+GRIG A+A+R F PI Y++R A ++ Y ++ L + + LT+ETHH+ + + S I IN Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTV---EQNAAIFAEAEGLLGSNE-NVNAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: SERA_METTH (D-3-phosphoglycerate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=serA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13 Identity = 46/185 (24.86%), Postives = 81/185 (43.78%), Query Frame = 3 Query: 141 AVVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKNGHFELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISYHSRSEKSHANYKYYTNIIDLAS---NCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 A+V ++ E+I++ P L+I+A VG + V N P R++ D VK GKW+ F +G + +GK++GI+G+GRIG+ + R +AFG I + A + + DL + I+ + LT ET H+++ + + ++N Sbjct: 46 AIVVRSRTKVTREVIEAAPRLKIIARAGVGVDNVDVKAATDRGIMVINAPESTSITVAEHSIGLMLALARKIAIADRSVKEGKWEKNRF-MGIELNGKTLGIIGMGRIGSQVVVRTKAFGMDIMVYDPYISKEAAEEMGVTVTDLETLLRESDIVTIHVPLTPETRHLISEDEFKLMKDTAFIVN 229
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SERP5 (Glyoxylate/hydroxypyruvate reductase B OS=Serratia proteamaculans (strain 568) GN=ghrB PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13 Identity = 51/178 (28.65%), Postives = 79/178 (44.38%), Query Frame = 3 Query: 171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKYYTNIIDL---ASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 D + P L ++ SVG V + +TP RRV E E VK+G+W+ G G K++GI+G+GRIG A+A+R FG P+ Y++R A ++ DL + + + LT+ET H+++R + + SGILIN Sbjct: 57 DEAFLQQTPKLRAASTISVGYDNFDVDALNAHNVLLMHTPTVLTETVADTIMSLVLATARRVVEVAERVKAGEWQGSIGADWFGVDVHHKTIGILGMGRIGLALAQRAHFGFGMPVLYNARRTHEEAEQRFNARRCDLDTLLAESDFICITLPLTDETFHMISRDQLAKMKKSGILIN 234 The following BLAST results are available for this feature:
BLAST of FC869080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869080 ID=FC869080; Name=FC869080; organism=Citrus clementina; type=EST; length=688bpback to top |