FC869080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_YERE8 (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12 Identity = 61/235 (25.96%), Postives = 101/235 (42.98%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRAVVGDTKCGA--DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K S+++ + L Q L FT+ S N+ E SA++ G G D ++ P L ++ SVG + + +TP RRV E E VK+G+W++ G G K++GI+G+GRIG A+A+R F P+ Y SR A ++ ++ L + L + +TE+T+H++ + + + S ILIN Sbjct: 2 KPSIVLYKSIPADLHQRLEQHFTVNSFEGLSSDNQ--PELLSALQQAEGLIGSGGKIDQAFLERAPKLRAASTISVGYDNFDVDALSQRGIALMHTPTVLTETVADTMMALVLSSARRVVELAERVKAGEWQDSIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEKRFGARRCSLDTLLAEVDFLCITLPMTEQTYHMIGPEQLAKMKSSAILIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: Y2305_STAAM (Putative 2-hydroxyacid dehydrogenase SAV2305 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2305 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12 Identity = 46/187 (24.60%), Postives = 83/187 (44.39%), Query Frame = 3 Query: 141 AVVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKNGH--FELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISY---HSRSEKSHANYKYYTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 A++ D ++ID+ L+I+A+Y G ++ VTNTP RR+ E D+ ++ + F G + SGK++GI+GLG IG+A+A+R AF + Y + + EK Y ++ L N + + + + HH+++ + + + LIN Sbjct: 47 ALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTVYLIN 233
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: Y2098_STAAN (Putative 2-hydroxyacid dehydrogenase SA2098 OS=Staphylococcus aureus (strain N315) GN=SA2098 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12 Identity = 46/187 (24.60%), Postives = 83/187 (44.39%), Query Frame = 3 Query: 141 AVVGDTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKNGH--FELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISY---HSRSEKSHANYKYYTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 A++ D ++ID+ L+I+A+Y G ++ VTNTP RR+ E D+ ++ + F G + SGK++GI+GLG IG+A+A+R AF + Y + + EK Y ++ L N + + + + HH+++ + + + LIN Sbjct: 47 ALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTVYLIN 233
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SALTI (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella typhi GN=ghrB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 58/235 (24.68%), Postives = 97/235 (41.28%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRAVVG--DTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K S+++ + + L L A FT+ ++ + + ++ A + G T + L++ +P L ++ SVG + + +TP RRV + E VK+G+W G G K++GIVG+GRIG A+A+R F P+ YH+R A ++ Y ++ L + V LT ET H+ + S I IN Sbjct: 2 KPSIILYKTLPDDLLHRLEAHFTVTQV--PNLHPETVARHAQAFASAQGLLGTSETVNRALLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTETVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SALPB (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ghrB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 58/235 (24.68%), Postives = 97/235 (41.28%), Query Frame = 3 Query: 6 KISVLMTTPMSNYLEQELAARFTLFKLWTQSCKNKFFQENSSAIRAVVG--DTKCGADAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 K S+++ + + L L A FT+ ++ + + ++ A + G T + L++ +P L ++ SVG + + +TP RRV + E VK+G+W G G K++GIVG+GRIG A+A+R F P+ YH+R A ++ Y ++ L + V LT ET H+ + S I IN Sbjct: 2 KPSIILYKTLPDDLLHRLEAHFTVTQV--PNLHPETVARHAQAFASAQGLLGTSETVNRALLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPTVLTETVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTTETRHLFGTTQFARMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: SERA_MYCLE (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium leprae GN=serA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 47/176 (26.70%), Postives = 78/176 (44.32%), Query Frame = 3 Query: 171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKNGHFELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPI----SYHSRSEKSHANYKYYTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 DAE++ + P L+IVA VG V V N P R++ E D +++ WK F G++ GK+VG+VGLGRIG +A R+ AFG + Y + + + + + DL + + V T ET +++++ + P I++N Sbjct: 56 DAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIAEADASLRAHIWKRSSFS-GTEIFGKTVGVVGLGRIGQLVAARIAAFGAHVIAYDPYVAPARAAQLGIE-LMSFDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVN 229
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SALTY (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella typhimurium GN=ghrB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 3 Query: 180 LIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 L++ +P L ++ SVG + + +TP RRV + E VK+G+W G G K++GIVG+GRIG A+A+R F P+ YH+R A ++ Y ++ L + V LT ET H+ + S I IN Sbjct: 60 LLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTETVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SALPK (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi A (strain AKU_12601) GN=ghrB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 3 Query: 180 LIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 L++ +P L ++ SVG + + +TP RRV + E VK+G+W G G K++GIVG+GRIG A+A+R F P+ YH+R A ++ Y ++ L + V LT ET H+ + S I IN Sbjct: 60 LLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTETVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTTETRHLFGTTQFARMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SALPC (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi C (strain RKS4594) GN=ghrB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 3 Query: 180 LIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 L++ +P L ++ SVG + + +TP RRV + E VK+G+W G G K++GIVG+GRIG A+A+R F P+ YH+R A ++ Y ++ L + V LT ET H+ + S I IN Sbjct: 60 LLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPTVLTETVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SALPA (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi A GN=ghrB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 3 Query: 180 LIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 L++ +P L ++ SVG + + +TP RRV + E VK+G+W G G K++GIVG+GRIG A+A+R F P+ YH+R A ++ Y ++ L + V LT ET H+ + S I IN Sbjct: 60 LLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTETVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTTETRHLFGTTQFARMKSSAIFIN 234 The following BLAST results are available for this feature:
BLAST of FC869080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869080 ID=FC869080; Name=FC869080; organism=Citrus clementina; type=EST; length=688bpback to top |