FC869080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SALNS (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella newport (strain SL254) GN=ghrB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 3 Query: 180 LIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 L++ +P L ++ SVG + + +TP RRV + E VK+G+W G G K++GIVG+GRIG A+A+R F P+ YH+R A ++ Y ++ L + V LT ET H+ + S I IN Sbjct: 60 LLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTETVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SALHS (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella heidelberg (strain SL476) GN=ghrB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 3 Query: 180 LIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 L++ +P L ++ SVG + + +TP RRV + E VK+G+W G G K++GIVG+GRIG A+A+R F P+ YH+R A ++ Y ++ L + V LT ET H+ + S I IN Sbjct: 60 LLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTETVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SALG2 (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=ghrB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 3 Query: 180 LIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 L++ +P L ++ SVG + + +TP RRV + E VK+G+W G G K++GIVG+GRIG A+A+R F P+ YH+R A ++ Y ++ L + V LT ET H+ + S I IN Sbjct: 60 LLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTETVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SALEP (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella enteritidis PT4 (strain P125109) GN=ghrB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 3 Query: 180 LIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 L++ +P L ++ SVG + + +TP RRV + E VK+G+W G G K++GIVG+GRIG A+A+R F P+ YH+R A ++ Y ++ L + V LT ET H+ + S I IN Sbjct: 60 LLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTETVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SALDC (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella dublin (strain CT_02021853) GN=ghrB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 3 Query: 180 LIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 L++ +P L ++ SVG + + +TP RRV + E VK+G+W G G K++GIVG+GRIG A+A+R F P+ YH+R A ++ Y ++ L + V LT ET H+ + S I IN Sbjct: 60 LLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTETVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SALCH (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella choleraesuis GN=ghrB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 3 Query: 180 LIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 L++ +P L ++ SVG + + +TP RRV + E VK+G+W G G K++GIVG+GRIG A+A+R F P+ YH+R A ++ Y ++ L + V LT ET H+ + S I IN Sbjct: 60 LLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPTVLTETVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GHRB_SALA4 (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella agona (strain SL483) GN=ghrB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 3 Query: 180 LIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKN--GHFELGSKFSGKSVGIVGLGRIGTAIAKRVE-AFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 L++ +P L ++ SVG + + +TP RRV + E VK+G+W G G K++GIVG+GRIG A+A+R F P+ YH+R A ++ Y ++ L + V LT ET H+ + S I IN Sbjct: 60 LLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTETVADTVMALMLTTARRVVDVAERVKAGEWTESIGPAWFGIDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFIN 234
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: DHGY_HYPME (Glycerate dehydrogenase OS=Hyphomicrobium methylovorum PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 47/178 (26.40%), Postives = 78/178 (43.82%), Query Frame = 3 Query: 177 ELIDSLP-TLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKNGH-FEL-GSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISY---HSRSEKSHANYK--YYTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 E+ID +P ++ +++YS+G ++V N P RR E ++ +++ W EL G K K++GI G G IG A+AKR + F I Y H S A+Y+ ++ ++ L S Q + T ET + N+ I +L I++N Sbjct: 61 EVIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVN 238
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: SERA_MYCTU (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis GN=serA PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 47/176 (26.70%), Postives = 78/176 (44.32%), Query Frame = 3 Query: 171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKNGHFELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPI----SYHSRSEKSHANYKYYTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 DAE++ + P L+IVA VG V V N P R++ D ++ WK F G++ GK+VG+VGLGRIG +A+R+ AFG + Y S + + + ++ DL + + V T ET +++++ + P I++N Sbjct: 56 DAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFS-GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIE-LLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVN 229
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: SERA_MYCBO (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium bovis GN=serA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 47/176 (26.70%), Postives = 78/176 (44.32%), Query Frame = 3 Query: 171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKNGHFELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPI----SYHSRSEKSHANYKYYTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686 DAE++ + P L+IVA VG V V N P R++ D ++ WK F G++ GK+VG+VGLGRIG +A+R+ AFG + Y S + + + ++ DL + + V T ET +++++ + P I++N Sbjct: 56 DAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFS-GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIE-LLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVN 229 The following BLAST results are available for this feature:
BLAST of FC869080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869080 ID=FC869080; Name=FC869080; organism=Citrus clementina; type=EST; length=688bpback to top |