FC869089

Overview
NameFC869089
Unique NameFC869089
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9455 contig Ccv1_Contig9455:1..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 9.414e-40
Identity = 84/189 (44.44%), Postives = 117/189 (61.90%), Query Frame = 1
Query:  151 ILACYTLLSFSVLTHSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 717
            +L    L+S++    +AP+   I ++PG +     + YSGY+    S  ++L Y+FVES+ +P   PVVLWLNGGPGCSS DG + EHGPF  +          L  NPYSW  +++++YL+SPAGVG SYS++K  Y T D + A      L  +F L+PE+  N  F+ GESYAGIY+PTLA  VM+
Sbjct:   13 LLLLLLLVSWASRGEAAPDQDEIQRLPGLAKQPSFRQYSGYLK--GSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGV-----TLEYNPYSWNLIANVLYLESPAGVGFSYSDDKF-YATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQ 193          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.230e-39
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1
Query:  187 LTHSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIY-EHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 717
            L    P   L+ ++PG    +  + ++GYV +D   GR+LFYYFVE+E  P   P+ LWLNGGPGCSS  G  + E GPF    PT  G    L  NP SW K S+++++DSPAGVG SYS   +DY TGD  TA D   F+L+W E +P+F     F+AGESYAG YVP LA  +++
Sbjct:   28 LAEGFPVQDLVTKLPG-QPEVAFRQFAGYVDIDVKAGRSLFYYFVEAEKQPHSKPLTLWLNGGPGCSSIGGGAFTELGPFY---PT--GDARGLRRNPKSWNKASNLLFVDSPAGVGWSYSNTTSDYTTGDESTAKDMLVFMLRWLEKFPQFKTRNLFLAGESYAGHYVPQLADVILE 199          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.230e-39
Identity = 86/195 (44.10%), Postives = 118/195 (60.51%), Query Frame = 1
Query:  121 MGKGRLIMYKILACYTLLSFSVLTHSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIY-EHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLA 702
            M   R ++  I+   T+  + V     PE  L+A++PG   N+  + ++GYV VD  +GR+LFYY+VE+   P   P+ LWLNGGPGCSS  G  + E GPF    PT  G    L +N  SW K S++++++SPAGVG SYS   +DY TGD  T +D   FLL+WF  +PE  +   F+ GESYAG Y+P LA
Sbjct:    1 MVSSRAVVMAIMVLVTV-QWLVFAEGYPEEDLVARLPG-QPNVGFRQFAGYVDVDSENGRSLFYYYVEAVKEPDTKPLTLWLNGGPGCSSVGGGAFTELGPFY---PTGDGR--GLRLNSMSWNKASNLLFVESPAGVGWSYSNRSSDYNTGDKSTVNDMLVFLLRWFNKFPELKSRDLFLTGESYAGHYIPQLA 188          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.230e-39
Identity = 86/183 (46.99%), Postives = 111/183 (60.66%), Query Frame = 1
Query:  169 LLSFSVLTHSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIY-EHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVM 714
            LLS        PE  L+ ++PG    +  K Y+GYV VD   GR+LFYY+VE+   P   P+ LWLNGGPGCSS  G  + E GPF    PT  G    L VN  SW K S +++++SPAGVG SYS   +DY TGD  TA+D   FLL+WFE +P+  +   F+ GESYAG Y+P LA  ++
Sbjct:   17 LLSLQWFAKGYPEEDLVVRLPG-QPTVGFKQYAGYVDVDVKAGRSLFYYYVEAVKQPDSKPLTLWLNGGPGCSSIGGGAFTELGPFY---PTGDGR--GLRVNSMSWNKASHLLFVESPAGVGWSYSNKSSDYNTGDKSTANDMLVFLLRWFEKFPKLKSRDLFLTGESYAGHYIPQLADAIL 193          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.672e-39
Identity = 91/193 (47.15%), Postives = 120/193 (62.18%), Query Frame = 1
Query:  136 LIMYKILACYTLLSFSVLTHS--APETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDY-VTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLA 702
            LI+  ++ C     F     S  A E  L+  +PG   ++  +HY+GYV VDES+GR +FY+F E+   P + P+VLWLNGGPGCSS   G   E GPF  +   T G+   L+ NPY+W K +++++L+SP GVG SYS   +DY   GD  TA D +TFL  WFE +PE   N F+IAGESYAG YVP LA
Sbjct:   22 LILAPVVICTRQHRFDSPKRSLLANEQDLVTGLPG-QPDVSFRHYAGYVPVDESNGRAMFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLVD---TNGN--GLNFNPYAWNKEANMLFLESPVGVGFSYSNTSSDYQKLGDDFTARDAYTFLCNWFEKFPEHKENTFYIAGESYAGKYVPELA 208          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.041e-38
Identity = 91/191 (47.64%), Postives = 119/191 (62.30%), Query Frame = 1
Query:  136 LIMYKILACYTLLSFSVLTHSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTA-SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLA 702
            LI+ ++++C      S L   A E  L+  +PG   ++  KHY+GYV VD+S+GR LFY+F E+   P + P+VLWLNGGPGCSS   G   E GPF  +    KG    L  NPY+W K  ++++L+SP GVG SYS   +DY+  D   A  D +TFL  WFE +PE   N F+IAGESYAGIYVP LA
Sbjct:   21 LILVEMVSCARQHRRSFL---AKEADLVTNLPG-QPDVSFKHYAGYVPVDKSNGRALFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLADT-NEKG----LIFNPYAWNKEVNMLFLESPVGVGFSYSNTSSDYLNLDDHFAKKDAYTFLCNWFEKFPEHKGNEFYIAGESYAGIYVPELA 202          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: SCP32_ARATH (Serine carboxypeptidase-like 32 OS=Arabidopsis thaliana GN=SCPL32 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.319e-38
Identity = 89/187 (47.59%), Postives = 117/187 (62.57%), Query Frame = 1
Query:  154 LACYTLLSFSVLTHSAPETA--LIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDY-VTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLA 702
            +A Y    F+ ++  +PE    L+   PG    +  +HY+GYVTV+   GR LFY+F E+  +P+  P+VLWLNGGPGCSS   G   E GPF  +    KG+   L  NPY+W K ++I++L+SPAGVG SYS   +DY   GD  TA D++TFL KWF  +P +    FFIAGESYAG YVP LA
Sbjct:    9 IALYLCTLFAFVSSDSPEAMRDLVTNFPG-QPKVSFRHYAGYVTVNIISGRALFYWFFEAMTHPNVKPLVLWLNGGPGCSSVGYGATQEIGPFLVD---NKGN--SLKFNPYAWNKEANILFLESPAGVGFSYSNTSSDYRKLGDDFTARDSYTFLQKWFLRFPAYKEKDFFIAGESYAGKYVPELA 189          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.028e-38
Identity = 80/173 (46.24%), Postives = 112/173 (64.74%), Query Frame = 1
Query:  217 IAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVT-GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDA 729
            + ++PG + +    HY+GYVTV E  G  LFY+F E+  +P+  P++LWLNGGPGCSS   G   E GPF+  A   KG    +H+NPYSW +V++I++LDSP GVG SYS    D ++ GD +TA D+  FL KW E +P++    F++ GESYAG YVP LA  + +  +A
Sbjct:    1 VPRVPGQAFDASFAHYAGYVTVSEDRGAALFYWFFEAAHDPASKPLLLWLNGGPGCSSIAFGVGEEVGPFHVNA-DGKG----VHMNPYSWNQVANILFLDSPVGVGYSYSNTSADILSNGDERTAKDSLVFLTKWLERFPQYKEREFYLTGESYAGHYVPQLAQAIKRHHEA 168          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.811e-38
Identity = 89/198 (44.95%), Postives = 119/198 (60.10%), Query Frame = 1
Query:  145 YKILACYTLLSFSVLTHSAPETAL-------IAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESE--GNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPK-LHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTD-YVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLA 702
            Y  L    LL+ S    +AP + +       I+ +PG   N+  + YSGYVTV E  GR LFY+ VES    +P   P+VLWLNGGPGCSS   G   E GPF        GS  K LH   Y+W K++++++L+SPAGVG SYS   +D Y TGD +TA D++ FL+ WFE +P++    F+I GESYAG +VP L+
Sbjct:    3 YSFLLIILLLTISTSCCAAPSSYVEEQLRDRISNLPGQPSNVDFRQYSGYVTVHEERGRALFYWLVESPLARDPKSRPLVLWLNGGPGCSSVAYGAAEEIGPFRV------GSDGKTLHSKLYAWNKLANLLFLESPAGVGFSYSNTTSDLYTTGDQRTAEDSYIFLVNWFERFPQYKHREFYIVGESYAGHFVPQLS 194          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.151e-37
Identity = 78/164 (47.56%), Postives = 104/164 (63.41%), Query Frame = 1
Query:  226 IPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 717
            +PG +     + YSGY+    S  + L Y+FVES+ +P   PVVLWLNGGPGCSS DG + EHGPF  +          L  NPYSW  +++++YL+SPAGVG SYS++K+ Y T D + A      L  +F L+PE+  N  F+ GESYAGIY+PTLA  VM+
Sbjct:   37 LPGLAKQPSFRQYSGYLK--GSGSKRLHYWFVESQKDPKSSPVVLWLNGGPGCSSLDGLLTEHGPFLIQPDGV-----TLEYNPYSWNLIANVLYLESPAGVGFSYSDDKS-YATNDTEVAQSNFEALKDFFCLFPEYKGNELFLTGESYAGIYIPTLAVLVMQ 192          
The following BLAST results are available for this feature:
BLAST of FC869089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
PPGB_HUMAN9.414e-4044.44Lysosomal protective protein OS=Homo sapiens GN=CT... [more]
SCP44_ARATH1.230e-3947.19Serine carboxypeptidase-like 44 OS=Arabidopsis tha... [more]
SCP43_ARATH1.230e-3944.10Serine carboxypeptidase-like 43 OS=Arabidopsis tha... [more]
SCP42_ARATH1.230e-3946.99Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]
SCP31_ARATH4.672e-3947.15Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
SCP30_ARATH1.041e-3847.64Putative serine carboxypeptidase-like 30 OS=Arabid... [more]
SCP32_ARATH2.319e-3847.59Serine carboxypeptidase-like 32 OS=Arabidopsis tha... [more]
CBP22_HORVU3.028e-3846.24Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
SCP27_ARATH8.811e-3844.95Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
PPGB_BOVIN1.151e-3747.56Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]

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Properties
Property NameValue
Genbank descriptionC31008D08EF AbioticL1 Citrus clementina cDNA clone C31008D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869089 ID=FC869089; Name=FC869089; organism=Citrus clementina; type=EST; length=735bp
AGAAAAATATTGGACTGTAATCCACGTTTTTTCAATAGAAACTTGCATTT
TCACCAACTATATAAATGCGTCTCGGGGATCCTCAAACAGTCATGCAGTC
TACTCTAATCAAACTTTTTAATGGGTAAAGGTCGTCTTATCATGTACAAG
ATACTAGCTTGTTACACATTATTGAGCTTTTCAGTGTTGACTCATTCAGC
TCCTGAAACTGCTCTCATCGCTCAGATTCCTGGCTTCTCTGGCAATCTCC
CTTCCAAGCACTATTCTGGGTATGTGACGGTTGATGAAAGCCATGGGAGG
AACCTCTTTTACTACTTTGTTGAATCCGAAGGGAATCCATCCAAGGATCC
TGTGGTTCTGTGGCTCAATGGTGGACCAGGATGCTCCAGCTTTGATGGTT
TTATATATGAGCACGGGCCTTTCAATTTTGAAGCACCAACGACAAAGGGA
AGTCTGCCCAAGTTGCATGTCAATCCATATAGCTGGACCAAGGTTTCTAG
CATTATATATTTAGATTCCCCAGCTGGTGTTGGACTTTCTTACTCAGAAA
ATAAAACTGATTATGTTACTGGGGACTTAAAGACTGCCTCTGATACACAC
ACATTTCTCCTCAAGTGGTTTGAACTATACCCGGAGTTCCTAGCCAACCC
ATTTTTTATTGCTGGAGAGTCATATGCTGGGATATATGTGCCCACTCTTG
CTTATGAAGTGATGAAAGGAATTGATGCTGGTGAA
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