FC869089

Overview
NameFC869089
Unique NameFC869089
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9455 contig Ccv1_Contig9455:1..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: PEPF_ASPNG (Serine-type carboxypeptidase F OS=Aspergillus niger GN=pepF PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18
Identity = 54/161 (33.54%), Postives = 87/161 (54.04%), Query Frame = 1
Query:  244 NLPSKH------YSGYVTVDESH-GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLAN-PFFIAGESYAGIYVPTLA 702
            +LP  H      YSG V +++ +  R+LF+ F  + G P  D + +WLNGGPGCSS + F+ E+G F ++  T +        NPYSW  +++++++D P G G S         T + + A D   F   W +++   + N   ++ GESYAG YVP ++
Sbjct:   72 SLPDVHFDLGEMYSGLVPIEKGNVSRSLFFVFQPTIGEPV-DEITIWLNGGPGCSSLEAFLQENGRFVWQPGTYQPV-----ENPYSWVNLTNVLWVDQPVGTGFSLG---VPTATSEEEIAEDFVKFFKNWQQIFG--IKNFKIYVTGESYAGRYVPYIS 221          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: RISC_MOUSE (Retinoid-inducible serine carboxypeptidase OS=Mus musculus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.794e-14
Identity = 55/157 (35.03%), Postives = 78/157 (49.68%), Query Frame = 1
Query:  271 YVTV-DESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT-ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 732
            YVTV  ++H     YY      N S+ P+V+WL GGPG SS   G   E GP + +          L     +W + +S++++D+P G G SY  N TD    DL T ASD    L  +F+ + EF   PF+I  ESY G     ++ E+ K +  G
Sbjct:   42 YVTVRKDAHMFWWLYYATNPCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPLDTQ----------LKPRNTTWLQWASLLFVDNPVGTGFSYV-NTTDAYAKDLDTVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGGKMAAGISVELYKAVQQG 187          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: RISC_RAT (Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.159e-13
Identity = 55/157 (35.03%), Postives = 78/157 (49.68%), Query Frame = 1
Query:  271 YVTVDESHGRNLFYYFVESE-GNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT-ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 732
            YVTV E      + Y+  +   N S+ P+V+WL GGPG SS   G   E GP +           +L     +W + +S++++D+P G G SY  N TD    DL T ASD    L  +F+ + EF   PF+I  ESY G     ++ E+ K I  G
Sbjct:   42 YVTVREDARMFWWLYYATNPCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPLD----------TRLKPRNTTWLQWASLLFVDNPVGTGFSYV-NTTDAYAKDLDTVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGGKMAAGISLELHKAIQQG 187          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: RISC_HUMAN (Retinoid-inducible serine carboxypeptidase OS=Homo sapiens GN=SCPEP1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.582e-13
Identity = 47/142 (33.10%), Postives = 65/142 (45.77%), Query Frame = 1
Query:  310 YYFVESEGNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 732
            YY   S  N S+ P+V+WL GGPG SS   G   E GP + +    K +          W + +S++++D+P G G SY      Y       ASD    L  +F  + EF   PF+I  ESY G     +  E+ K I  G
Sbjct:   56 YYATNSCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPLDSDLKPRKTT----------WLQAASLLFVDNPVGTGFSYVNGSGAYAKDLAMVASDMMVLLKTFFSCHKEFQTVPFYIFSESYGGKMAAGIGLELYKAIQRG 187          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: SCPB_TRIRU (Carboxypeptidase S1 homolog B OS=Trichophyton rubrum GN=SCPB PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13
Identity = 55/195 (28.21%), Postives = 77/195 (39.49%), Query Frame = 1
Query:  256 KHYSGYVT----------VDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSY-------------------------------------SENKTDYVTGDLKTASDTHTFLLKWFELYPEF--LANPFFIAGESYAGIYVP 693
            K Y+GYV           V++ +  N F++F E+  +P   P+ +W+NGGPG SS  G + E+GP    A +    L     NP+SW    +++Y+D P  VGLSY                                     S N      G    A     F   WF+ +P +    N   IA ESY G Y P
Sbjct:   58 KSYAGYVHLPPGTLRDFGVEQDYPINTFFWFFEARKDPENAPLGIWMNGGPGSSSMFGMMTENGPCFVNADSNSTRL-----NPHSWNNEVNMLYIDQPVQVGLSYDTLANFTRNLVTDEITKLKPGEPIPEQNATFLVGTYASRNMNTTAHGTRHAAMALWHFAQVWFQEFPGYHPRNNKISIATESYGGRYGP 247          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: SPCA_NANOT (Carboxypeptidase S1 homolog A OS=Nannizzia otae (strain CBS 113480) GN=SCPA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 55/197 (27.92%), Postives = 84/197 (42.64%), Query Frame = 1
Query:  226 IPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGP--FNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYS------------------------ENKTDYVTGDL------KTASDTHT-------FLLKWFELYPEFLAN--PFFIAGESYAGIYVP 693
            +  F+G++     +    V++++  N F++F E+  +P   P+ +WLNGGPG SS  G   E+GP   N ++ +T         NPYSW    +++Y+D P  VG SY                         E     + G L       TA++T         F   WF+ +PE+  N     I  ESY G Y P
Sbjct:   56 VRSFTGHVHLPPNNNDFGVNQNYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSMIGLFQENGPCMVNNDSNSTTN-------NPYSWNNKVNMLYIDQPNQVGFSYDVPTNVTVNPINDEVTVADFSNGVPEQNNTLLVGTLGSQNPYATANNTQNAARSIWHFAQVWFQEFPEYKPNNDKVSIWTESYGGRYGP 245          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: SCPB_NANOT (Carboxypeptidase S1 homolog B OS=Nannizzia otae (strain CBS 113480) GN=SCPB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 1
Query:  256 KHYSGYVT----------VDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSY 543
            K Y+GYV           V++ +  N F++F E+  +P   P+ +W+NGGPG SS  G + E+GP  F  P +  +     +NP+SW    +++YLD P  VGLSY
Sbjct:   58 KSYAGYVHLPPGTLKDLGVEQDYPINTFFWFFEARKDPENAPLSIWMNGGPGSSSMFGMMTENGPC-FVNPDSNST----RLNPHSWNNEVNMLYLDQPVQVGLSY 158          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: SPCA_TRIEQ (Carboxypeptidase S1 homolog A OS=Trichophyton equinum GN=SCPA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.305e-12
Identity = 56/182 (30.77%), Postives = 79/182 (43.41%), Query Frame = 1
Query:  280 VDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGP--FNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSE---------NKTDYV-----------------TGDLK----TASDTHT-------FLLKWFELYPEFLA--NPFFIAGESYAGIYVPTLA 702
            V  ++  N F++F E+  +P   P+ +WLNGGPG SS  G   E+GP   N ++ +T         N +SW    +++Y+D P  VG SY E         N T YV                 TG  +    TA++T         F   WF+ +PE     N   I  ESY G Y P+ A
Sbjct:   74 VYRNYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSMIGLFQENGPCWINDDSKSTTN-------NTFSWNNKVNMLYIDQPNQVGFSYDELTNITYSTINDTVYVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFA 248          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: SCPA_TRITO (Carboxypeptidase S1 homolog A OS=Trichophyton tonsurans GN=SCPA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.305e-12
Identity = 56/182 (30.77%), Postives = 79/182 (43.41%), Query Frame = 1
Query:  280 VDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGP--FNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSE---------NKTDYV-----------------TGDLK----TASDTHT-------FLLKWFELYPEFLA--NPFFIAGESYAGIYVPTLA 702
            V  ++  N F++F E+  +P   P+ +WLNGGPG SS  G   E+GP   N ++ +T         N +SW    +++Y+D P  VG SY E         N T YV                 TG  +    TA++T         F   WF+ +PE     N   I  ESY G Y P+ A
Sbjct:   74 VYRNYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSMIGLFQENGPCWINDDSKSTTN-------NTFSWNNKVNMLYIDQPNQVGFSYDELTNITYSTINDTVYVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFA 248          
BLAST of FC869089 vs. ExPASy Swiss-Prot
Match: SCP51_ARATH (Serine carboxypeptidase-like 51 OS=Arabidopsis thaliana GN=SCPL51 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.156e-11
Identity = 53/164 (32.32%), Postives = 76/164 (46.34%), Query Frame = 1
Query:  268 GYVTVDESHGRNLFYYFVESE---GNPSKD-PVVLWLNGGPGCSSFD-GFIYEHGPFN-FEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSE-NKTD-YVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 735
            GYV V      ++F++  +S     NPSK  P++LWL GGPG S    G   E GP + F  P              +W K + ++++DSP G G S+ E N+ D YV  D + A D    L + F        +P FI  ESY G     L   V+  + +G+
Sbjct:   37 GYVEVRPK--AHMFWWHYKSPYRVENPSKPWPIILWLQGGPGASGVGIGNFQEVGPLDTFLKPRNS-----------TWLKKADLLFVDSPVGAGYSFVEGNQKDLYVKSDEEAAQDLTKLLQQLFNKNQTLNQSPLFIVAESYGGKIAVKLGLSVIDAVQSGK 187          
The following BLAST results are available for this feature:
BLAST of FC869089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
PEPF_ASPNG3.481e-1833.54Serine-type carboxypeptidase F OS=Aspergillus nige... [more]
RISC_MOUSE6.794e-1435.03Retinoid-inducible serine carboxypeptidase OS=Mus ... [more]
RISC_RAT1.159e-1335.03Retinoid-inducible serine carboxypeptidase OS=Ratt... [more]
RISC_HUMAN2.582e-1333.10Retinoid-inducible serine carboxypeptidase OS=Homo... [more]
SCPB_TRIRU4.404e-1328.21Carboxypeptidase S1 homolog B OS=Trichophyton rubr... [more]
SPCA_NANOT7.511e-1327.92Carboxypeptidase S1 homolog A OS=Nannizzia otae (s... [more]
SCPB_NANOT7.511e-1336.79Carboxypeptidase S1 homolog B OS=Nannizzia otae (s... [more]
SPCA_TRIEQ8.305e-1230.77Carboxypeptidase S1 homolog A OS=Trichophyton equi... [more]
SCPA_TRITO8.305e-1230.77Carboxypeptidase S1 homolog A OS=Trichophyton tons... [more]
SCP51_ARATH3.156e-1132.32Serine carboxypeptidase-like 51 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC31008D08EF AbioticL1 Citrus clementina cDNA clone C31008D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869089 ID=FC869089; Name=FC869089; organism=Citrus clementina; type=EST; length=735bp
AGAAAAATATTGGACTGTAATCCACGTTTTTTCAATAGAAACTTGCATTT
TCACCAACTATATAAATGCGTCTCGGGGATCCTCAAACAGTCATGCAGTC
TACTCTAATCAAACTTTTTAATGGGTAAAGGTCGTCTTATCATGTACAAG
ATACTAGCTTGTTACACATTATTGAGCTTTTCAGTGTTGACTCATTCAGC
TCCTGAAACTGCTCTCATCGCTCAGATTCCTGGCTTCTCTGGCAATCTCC
CTTCCAAGCACTATTCTGGGTATGTGACGGTTGATGAAAGCCATGGGAGG
AACCTCTTTTACTACTTTGTTGAATCCGAAGGGAATCCATCCAAGGATCC
TGTGGTTCTGTGGCTCAATGGTGGACCAGGATGCTCCAGCTTTGATGGTT
TTATATATGAGCACGGGCCTTTCAATTTTGAAGCACCAACGACAAAGGGA
AGTCTGCCCAAGTTGCATGTCAATCCATATAGCTGGACCAAGGTTTCTAG
CATTATATATTTAGATTCCCCAGCTGGTGTTGGACTTTCTTACTCAGAAA
ATAAAACTGATTATGTTACTGGGGACTTAAAGACTGCCTCTGATACACAC
ACATTTCTCCTCAAGTGGTTTGAACTATACCCGGAGTTCCTAGCCAACCC
ATTTTTTATTGCTGGAGAGTCATATGCTGGGATATATGTGCCCACTCTTG
CTTATGAAGTGATGAAAGGAATTGATGCTGGTGAA
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