FC869090

Overview
NameFC869090
Unique NameFC869090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length598
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_BEII9 (Chaperone protein dnaK OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dnaK PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 2.106e-74
Identity = 129/180 (71.67%), Postives = 155/180 (86.11%), Query Frame = 3 
Query:    3 LGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFDVSILEI +GVFEVK+TNGDTFLGGEDFD  L+E+L  EFK+  GIDL KD+LALQRL+EAAEKAKIELSS TQT+INLP+ITADA+G KHL + LTR+KFE LV++LI++T  PC+  LKDA ++  +VDEV+LVGGMTR+PKVQE+V + FGK P KGVNPDE VA+GAA+Q
Sbjct:  194 LGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDTRLVEYLADEFKKENGIDLKKDKLALQRLKEAAEKAKIELSSATQTEINLPYITADATGPKHLALKLTRAKFEALVDDLIQKTVEPCRKALKDAGLSAGEVDEVVLVGGMTRMPKVQEIVKQFFGKEPHKGVNPDEVVAIGAAVQ 373

HSP 2 Score: 33.8834 bits (76), Expect = 2.106e-74
Identity = 14/18 (77.78%), Postives = 18/18 (100.00%), Query Frame = 2 
Query:  545 GILRGDVKELLLLDVTPL 598
            G+L+GDVK++LLLDVTPL
Sbjct:  375 GVLQGDVKDVLLLDVTPL 392
[Close]
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_RHOS7 (Chaperone protein dnaK OS=Rhodopseudomonas sp. (strain No.7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 4.671e-74
Identity = 129/180 (71.67%), Postives = 155/180 (86.11%), Query Frame = 3 
Query:    3 LGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFDVSILEI +GVFEVK+TNGDTFLGGEDFD  L+ +L  EF++ +GIDL KD+LALQRL+EAAEKAKIELSSTTQT+INLPFITAD SG KHL + LTR+KFE LV++L+++T  PC+  LKDA +T  ++ EV+LVGGMTR+PKVQEVV ++FGK P KGVNPDE VA+GAAIQ
Sbjct:  194 LGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDMRLVNYLADEFQKEQGIDLRKDKLALQRLKEAAEKAKIELSSTTQTEINLPFITADQSGPKHLTMKLTRAKFEALVDDLVQKTIEPCRKALKDAGLTAGEISEVVLVGGMTRMPKVQEVVKQLFGKEPHKGVNPDEVVAIGAAIQ 373

HSP 2 Score: 33.8834 bits (76), Expect = 4.671e-74
Identity = 14/18 (77.78%), Postives = 18/18 (100.00%), Query Frame = 2 
Query:  545 GILRGDVKELLLLDVTPL 598
            G+L+GDVK++LLLDVTPL
Sbjct:  375 GVLQGDVKDVLLLDVTPL 392
[Close]
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPT (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain TIE-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 4.671e-74
Identity = 129/180 (71.67%), Postives = 155/180 (86.11%), Query Frame = 3 
Query:    3 LGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFDVSILEI +GVFEVK+TNGDTFLGGEDFD  L+ +L  EF++ +GIDL KD+LALQRL+EAAEKAKIELSSTTQT+INLPFITAD SG KHL + LTR+KFE LV++L+++T  PC+  LKDA +T  ++ EV+LVGGMTR+PKVQEVV ++FGK P KGVNPDE VA+GAAIQ
Sbjct:  194 LGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDMRLVNYLADEFQKEQGIDLRKDKLALQRLKEAAEKAKIELSSTTQTEINLPFITADQSGPKHLTMKLTRAKFEALVDDLVQKTIEPCRKALKDAGLTAGEISEVVLVGGMTRMPKVQEVVKQLFGKEPHKGVNPDEVVAIGAAIQ 373

HSP 2 Score: 33.8834 bits (76), Expect = 4.671e-74
Identity = 14/18 (77.78%), Postives = 18/18 (100.00%), Query Frame = 2 
Query:  545 GILRGDVKELLLLDVTPL 598
            G+L+GDVK++LLLDVTPL
Sbjct:  375 GVLQGDVKDVLLLDVTPL 392
[Close]
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPA (Chaperone protein dnaK OS=Rhodopseudomonas palustris GN=dnaK PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 4.671e-74
Identity = 129/180 (71.67%), Postives = 155/180 (86.11%), Query Frame = 3 
Query:    3 LGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFDVSILEI +GVFEVK+TNGDTFLGGEDFD  L+ +L  EF++ +GIDL KD+LALQRL+EAAEKAKIELSSTTQT+INLPFITAD SG KHL + LTR+KFE LV++L+++T  PC+  LKDA +T  ++ EV+LVGGMTR+PKVQEVV ++FGK P KGVNPDE VA+GAAIQ
Sbjct:  194 LGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDMRLVNYLADEFQKEQGIDLRKDKLALQRLKEAAEKAKIELSSTTQTEINLPFITADQSGPKHLTMKLTRAKFEALVDDLVQKTIEPCRKALKDAGLTAGEISEVVLVGGMTRMPKVQEVVKQLFGKEPHKGVNPDEVVAIGAAIQ 373

HSP 2 Score: 33.8834 bits (76), Expect = 4.671e-74
Identity = 14/18 (77.78%), Postives = 18/18 (100.00%), Query Frame = 2 
Query:  545 GILRGDVKELLLLDVTPL 598
            G+L+GDVK++LLLDVTPL
Sbjct:  375 GVLQGDVKDVLLLDVTPL 392
[Close]
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_METSB (Chaperone protein dnaK OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=dnaK PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 6.092e-74
Identity = 129/180 (71.67%), Postives = 154/180 (85.56%), Query Frame = 3 
Query:    3 LGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFDVSILEI +GVFEVK+TNGDTFLGGEDFD  L+E+L  EFK+  GIDL KD+LALQRL+EAAEKAKIELSS TQT+INLP+ITADA+G KHL + LTR+KFE LV++LI++T  PC+  LKDA +T  +++EV+LVGGMTR+PKVQEVV   FGK P KGVNPDE VA+GAA+Q
Sbjct:  194 LGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDVRLVEYLADEFKKENGIDLKKDKLALQRLKEAAEKAKIELSSATQTEINLPYITADATGPKHLTLKLTRAKFEALVDDLIQKTVEPCRKALKDAGLTAGEINEVVLVGGMTRMPKVQEVVKSFFGKEPHKGVNPDEVVAIGAAVQ 373

HSP 2 Score: 33.8834 bits (76), Expect = 6.092e-74
Identity = 14/18 (77.78%), Postives = 18/18 (100.00%), Query Frame = 2 
Query:  545 GILRGDVKELLLLDVTPL 598
            G+L+GDVK++LLLDVTPL
Sbjct:  375 GVLQGDVKDVLLLDVTPL 392
[Close]
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_DESPS (Chaperone protein dnaK OS=Desulfotalea psychrophila GN=dnaK PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 6.092e-74
Identity = 128/180 (71.11%), Postives = 152/180 (84.44%), Query Frame = 3 
Query:    3 LGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFDVS+LEI +GVFEVK+TNGDTFLGGEDFD  ++ +L  EFKR +GIDL  D++ALQRL+E AEKAK+ELS+T +TDINLPFITADASG KHLNI L+RSKFETLV +L+ERT  PCK  LKDA ++   +DEV+LVGGM+R+P VQ+ V EIFGK P KGVNPDE VA+GAAIQ
Sbjct:  194 LGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDMRIVHWLADEFKREQGIDLRSDKMALQRLKEEAEKAKMELSTTVETDINLPFITADASGPKHLNIKLSRSKFETLVEDLVERTVGPCKTALKDAGLSASQIDEVILVGGMSRMPMVQKKVVEIFGKEPHKGVNPDEVVAIGAAIQ 373

HSP 2 Score: 36.1946 bits (82), Expect = 6.092e-74
Identity = 15/19 (78.95%), Postives = 19/19 (100.00%), Query Frame = 2 
Query:  542 GGILRGDVKELLLLDVTPL 598
            GG+L+GDVK++LLLDVTPL
Sbjct:  374 GGVLQGDVKDVLLLDVTPL 392
[Close]
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_METRJ (Chaperone protein dnaK OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=dnaK PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 7.945e-74
Identity = 125/180 (69.44%), Postives = 157/180 (87.22%), Query Frame = 3 
Query:    3 LGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFDVSILEI +GVFEVK+TNGDTFLGGEDFDN ++E+L +EFK+ +GIDL+KD+LALQRL+EAAEKAKIELSS TQT+INLP+ITAD +G KHL + L+R+KFE+LV++L++RT  PC+  LKDA ++  ++DEV+LVGGM R+PK+QEVV   FGK P KGVNPDE VA+GAA+Q
Sbjct:  194 LGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDNRIVEYLTAEFKKEQGIDLTKDKLALQRLKEAAEKAKIELSSATQTEINLPYITADNTGPKHLALKLSRAKFESLVDDLVQRTIEPCRKALKDAGVSASEIDEVVLVGGMIRMPKIQEVVKSFFGKEPHKGVNPDEVVAIGAAVQ 373

HSP 2 Score: 33.8834 bits (76), Expect = 7.945e-74
Identity = 14/18 (77.78%), Postives = 18/18 (100.00%), Query Frame = 2 
Query:  545 GILRGDVKELLLLDVTPL 598
            G+L+GDVK++LLLDVTPL
Sbjct:  375 GVLQGDVKDVLLLDVTPL 392
[Close]
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_XANP2 (Chaperone protein dnaK OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 1.036e-73
Identity = 129/180 (71.67%), Postives = 153/180 (85.00%), Query Frame = 3 
Query:    3 LGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFDVS+LEI +GVFEVK+TNGDTFLGGEDFD  L+ +L  EFK+ +GIDL  D+LALQRL+EAAEKAKIELSS TQT+INLPFITADA+G KHL + LTR+KFE LV++LI+RT  PC+  LKDA +T   +DEV+LVGGMTR+PKVQEVV + FGK P KGVNPDE VA+GAA+Q
Sbjct:  194 LGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVTYLADEFKKEQGIDLRNDKLALQRLKEAAEKAKIELSSATQTEINLPFITADATGPKHLTLKLTRAKFEALVDDLIQRTVEPCRLALKDAGLTAGQIDEVVLVGGMTRMPKVQEVVKQFFGKEPHKGVNPDEVVAIGAAVQ 373

HSP 2 Score: 33.8834 bits (76), Expect = 1.036e-73
Identity = 14/18 (77.78%), Postives = 18/18 (100.00%), Query Frame = 2 
Query:  545 GILRGDVKELLLLDVTPL 598
            G+L+GDVK++LLLDVTPL
Sbjct:  375 GVLQGDVKDVLLLDVTPL 392
[Close]
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_RHORT (Chaperone protein dnaK OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dnaK PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 1.762e-73
Identity = 125/180 (69.44%), Postives = 153/180 (85.00%), Query Frame = 3 
Query:    3 LGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFDVS+LEI +GVFEVK+TNGDTFLGGEDFD  ++++L SEFK+ +GIDL  DRLALQRL+EAAEKAKIELSS+ QT++NLPFITAD +G KHLNI LTR+K E LV++L++RT  PC+  L DA I   ++DEV+LVGGMTR+PKVQ+VV + FG+ P KGVNPDE VA+GAAIQ
Sbjct:  194 LGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDARIIDYLASEFKKEQGIDLRTDRLALQRLKEAAEKAKIELSSSMQTEVNLPFITADQAGPKHLNIKLTRAKLEALVDDLVQRTVEPCRKALADAGIKASEIDEVILVGGMTRMPKVQQVVKDFFGREPHKGVNPDEVVAMGAAIQ 373

HSP 2 Score: 36.5798 bits (83), Expect = 1.762e-73
Identity = 15/19 (78.95%), Postives = 19/19 (100.00%), Query Frame = 2 
Query:  542 GGILRGDVKELLLLDVTPL 598
            GG+L+GDVK++LLLDVTPL
Sbjct:  374 GGVLKGDVKDVLLLDVTPL 392
[Close]
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_BRUSU (Chaperone protein dnaK OS=Brucella suis GN=dnaK PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 1.762e-73
Identity = 128/180 (71.11%), Postives = 154/180 (85.56%), Query Frame = 3 
Query:    3 LGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFDVS+LEI +GVFEVK+TNGDTFLGGEDFD  L+E+LV+EFK+  GIDL  D+LALQRL+EAAEKAKIELSS+ QT+INLPFITAD +G KHL I L+R+KFE+LV++L++RT  PCK  LKDA +   ++DEV+LVGGMTR+PK+QEVV   FGK P KGVNPDE VA+GAAIQ
Sbjct:  194 LGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDIRLVEYLVAEFKKESGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFITADQTGPKHLAIKLSRAKFESLVDDLVQRTVEPCKAALKDAGLKAGEIDEVVLVGGMTRMPKIQEVVKAFFGKEPHKGVNPDEVVAMGAAIQ 373

HSP 2 Score: 36.1946 bits (82), Expect = 1.762e-73
Identity = 15/19 (78.95%), Postives = 19/19 (100.00%), Query Frame = 2 
Query:  542 GGILRGDVKELLLLDVTPL 598
            GG+L+GDVK++LLLDVTPL
Sbjct:  374 GGVLQGDVKDVLLLDVTPL 392
The following BLAST results are available for this feature:
BLAST of FC869090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BEII92.106e-7471.67Chaperone protein dnaK OS=Beijerinckia indica subs... [more]
DNAK_RHOS74.671e-7471.67Chaperone protein dnaK OS=Rhodopseudomonas sp. (st... [more]
DNAK_RHOPT4.671e-7471.67Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_RHOPA4.671e-7471.67Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_METSB6.092e-7471.67Chaperone protein dnaK OS=Methylocella silvestris ... [more]
DNAK_DESPS6.092e-7471.11Chaperone protein dnaK OS=Desulfotalea psychrophil... [more]
DNAK_METRJ7.945e-7469.44Chaperone protein dnaK OS=Methylobacterium radioto... [more]
DNAK_XANP21.036e-7371.67Chaperone protein dnaK OS=Xanthobacter autotrophic... [more]
DNAK_RHORT1.762e-7369.44Chaperone protein dnaK OS=Rhodospirillum rubrum (s... [more]
DNAK_BRUSU1.762e-7371.11Chaperone protein dnaK OS=Brucella suis GN=dnaK PE... [more]

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Properties
Property NameValue
Genbank descriptionC31008D09EF AbioticL1 Citrus clementina cDNA clone C31008D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869090 ID=FC869090; Name=FC869090; organism=Citrus clementina; type=EST; length=598bp
ATCTTGGTGGCGGAACATTTGATGTCTCAATCCTTGAAATTTCTAATGGA
GTATTTGAGGTGAAAGCAACAAATGGTGACACGTTCTTGGGGGGAGAGGA
TTTTGACAACACTTTGTTGGAGTTTTTAGTGAGTGAATTTAAGAGGACCG
AAGGAATTGATCTGTCAAAGGATAGGCTTGCATTGCAGAGGCTTCGTGAG
GCTGCCGAGAAGGCGAAGATTGAACTTTCATCAACAACCCAGACTGACAT
TAATCTTCCATTCATCACAGCTGATGCGTCAGGTGCAAAGCATTTGAATA
TCACACTTACTAGATCCAAATTTGAGACTTTGGTGAATAACCTGATTGAG
AGGACCAGAGCCCCTTGTAAGAACTGTTTGAAGGATGCCAACATTACCAC
AAAGGATGTGGATGAGGTGCTTTTGGTTGGAGGAATGACCCGTGTGCCAA
AGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTAAGAGTCCAAGCAAGGGA
GTAAATCCTGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAGGTGGTATT
CTTCGTGGCGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTG
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